RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 VDRP11473 427 aa17.89■□□□□ 0.45
CPSF4-203ENST00000430038 PMLP29590 882 aa17.89■□□□□ 0.45
CPSF4-203ENST00000430038 IL12RB1P42701 662 aa17.89■□□□□ 0.45
CPSF4-203ENST00000430038 RGS7P49802 495 aa17.89■□□□□ 0.45
CPSF4-203ENST00000430038 BCAT1P54687 386 aa17.89■□□□□ 0.45
CPSF4-203ENST00000430038 STX17P56962 302 aa17.89■□□□□ 0.45
CPSF4-203ENST00000430038 BST2Q10589 180 aaKnown RBP17.89■□□□□ 0.45
CPSF4-203ENST00000430038 BECN1Q14457 450 aa17.89■□□□□ 0.45
CPSF4-203ENST00000430038 BSPRYQ5W0U4 402 aa17.89■□□□□ 0.45
CPSF4-203ENST00000430038 TMEM270Q6UE05 265 aa17.89■□□□□ 0.45
CPSF4-203ENST00000430038 LCLAT1Q6UWP7 414 aa17.89■□□□□ 0.45
CPSF4-203ENST00000430038 RRAGAQ7L523 313 aa17.89■□□□□ 0.45
CPSF4-203ENST00000430038 FMNL3Q8IVF7 1028 aa17.89■□□□□ 0.45
CPSF4-203ENST00000430038 SLC35F5Q8WV83 523 aa17.89■□□□□ 0.45
CPSF4-203ENST00000430038 NELFBQ8WX92 580 aa17.89■□□□□ 0.45
CPSF4-203ENST00000430038 SORCS1Q8WY21 1168 aa17.89■□□□□ 0.45
CPSF4-203ENST00000430038 CCDC34Q96HJ3 373 aa17.89■□□□□ 0.45
CPSF4-203ENST00000430038 MRGPRX1Q96LB2 322 aa17.89■□□□□ 0.45
CPSF4-203ENST00000430038 KREMEN1Q96MU8 473 aa17.89■□□□□ 0.45
CPSF4-203ENST00000430038 CYP8B1Q9UNU6 501 aa17.89■□□□□ 0.45
CPSF4-203ENST00000430038 STON1Q9Y6Q2 735 aa17.89■□□□□ 0.45
CPSF4-203ENST00000430038 USP24Q9UPU5 2620 aa17.88■□□□□ 0.45
CPSF4-203ENST00000430038 MSI1O43347 362 aaKnown RBP17.88■□□□□ 0.45
CPSF4-203ENST00000430038 TSPAN3O60637 253 aa17.88■□□□□ 0.45
CPSF4-203ENST00000430038 LCP1P13796 627 aa17.88■□□□□ 0.45
CPSF4-203ENST00000430038 BRD2P25440 801 aaKnown RBP17.88■□□□□ 0.45
CPSF4-203ENST00000430038 SGSHP51688 502 aa17.88■□□□□ 0.45
CPSF4-203ENST00000430038 DAOAP59103 153 aa17.88■□□□□ 0.45
CPSF4-203ENST00000430038 ENPP2Q13822 863 aa17.88■□□□□ 0.45
CPSF4-203ENST00000430038 PREPLQ4J6C6 727 aaPredicted RBP17.88■□□□□ 0.45
CPSF4-203ENST00000430038 TRIM61Q5EBN2 209 aa17.88■□□□□ 0.45
CPSF4-203ENST00000430038 PEAR1Q5VY43 1037 aaPredicted RBP17.88■□□□□ 0.45
CPSF4-203ENST00000430038 PSAPL1Q6NUJ1 521 aa17.88■□□□□ 0.45
CPSF4-203ENST00000430038 RSRC2Q7L4I2 434 aaKnown RBP17.88■□□□□ 0.45
CPSF4-203ENST00000430038 TRMT11Q7Z4G4 463 aaKnown RBP17.88■□□□□ 0.45
CPSF4-203ENST00000430038 TADA2BQ86TJ2 420 aa17.88■□□□□ 0.45
CPSF4-203ENST00000430038 KCTD13Q8WZ19 329 aa17.88■□□□□ 0.45
CPSF4-203ENST00000430038 CEP63Q96MT8 703 aa17.88■□□□□ 0.45
CPSF4-203ENST00000430038 MKRN2Q9H000 416 aaKnown RBP17.88■□□□□ 0.45
CPSF4-203ENST00000430038 THAP10Q9P2Z0 257 aaPredicted RBP17.88■□□□□ 0.45
CPSF4-203ENST00000430038 ZNF510Q9Y2H8 683 aa17.88■□□□□ 0.45
CPSF4-203ENST00000430038 KNL1Q8NG31 2342 aa17.88■□□□□ 0.45
CPSF4-203ENST00000430038 ASPMQ8IZT6 3477 aa17.88■□□□□ 0.45
CPSF4-203ENST00000430038 CEP295Q9C0D2 2601 aa17.87■□□□□ 0.45
CPSF4-203ENST00000430038 MUC22E2RYF6 1773 aaPredicted RBP17.87■□□□□ 0.45
CPSF4-203ENST00000430038 KCNJ18B7U540 433 aa17.87■□□□□ 0.45
CPSF4-203ENST00000430038 PSMA7O14818 248 aa17.87■□□□□ 0.45
CPSF4-203ENST00000430038 FYNP06241 537 aa17.87■□□□□ 0.45
CPSF4-203ENST00000430038 HOXD9P28356 352 aaPredicted RBP17.87■□□□□ 0.45
CPSF4-203ENST00000430038 CHKAP35790 457 aa17.87■□□□□ 0.45
CPSF4-203ENST00000430038 RPL6Q02878 288 aaKnown RBP17.87■□□□□ 0.45
CPSF4-203ENST00000430038 FUT11Q495W5 492 aa17.87■□□□□ 0.45
CPSF4-203ENST00000430038 NUDT18Q6ZVK8 323 aa17.87■□□□□ 0.45
CPSF4-203ENST00000430038 SYT12Q8IV01 421 aa17.87■□□□□ 0.45
CPSF4-203ENST00000430038 TRIM59Q8IWR1 403 aa17.87■□□□□ 0.45
CPSF4-203ENST00000430038 ARHGAP18Q8N392 663 aa17.87■□□□□ 0.45
CPSF4-203ENST00000430038 CPXM2Q8N436 756 aa17.87■□□□□ 0.45
CPSF4-203ENST00000430038 DDX1Q92499 740 aaKnown RBP17.87■□□□□ 0.45
CPSF4-203ENST00000430038 MYEOVQ96EZ4 313 aa17.87■□□□□ 0.45
CPSF4-203ENST00000430038 SPACA7Q96KW9 195 aa17.87■□□□□ 0.45
CPSF4-203ENST00000430038 CDK5RAP1Q96SZ6 601 aaKnown RBP17.87■□□□□ 0.45
CPSF4-203ENST00000430038 DCLK3Q9C098 648 aa17.87■□□□□ 0.45
CPSF4-203ENST00000430038 LRRC4Q9HBW1 653 aa17.87■□□□□ 0.45
CPSF4-203ENST00000430038 METTL14Q9HCE5 456 aaKnown RBP17.87■□□□□ 0.45
CPSF4-203ENST00000430038 EVLQ9UI08 416 aaPredicted RBP17.87■□□□□ 0.45
CPSF4-203ENST00000430038 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.87■□□□□ 0.45
CPSF4-203ENST00000430038 CTNND2Q9UQB3 1225 aa17.87■□□□□ 0.45
CPSF4-203ENST00000430038 PCDHB4Q9Y5E5 795 aa17.87■□□□□ 0.45
CPSF4-203ENST00000430038 GOLGA6L7A0A1B0GV03 622 aa17.86■□□□□ 0.45
CPSF4-203ENST00000430038 KRT37O76014 449 aa17.86■□□□□ 0.45
CPSF4-203ENST00000430038 TOP3BO95985 862 aaKnown RBP17.86■□□□□ 0.45
CPSF4-203ENST00000430038 TBXAS1P24557 533 aaPredicted RBP17.86■□□□□ 0.45
CPSF4-203ENST00000430038 ZNF132P52740 706 aa17.86■□□□□ 0.45
CPSF4-203ENST00000430038 KCNH2Q12809 1159 aa17.86■□□□□ 0.45
CPSF4-203ENST00000430038 CNGA2Q16280 664 aa17.86■□□□□ 0.45
CPSF4-203ENST00000430038 CCDC40Q4G0X9 1142 aa17.86■□□□□ 0.45
CPSF4-203ENST00000430038 LYSMD4Q5XG99 296 aa17.86■□□□□ 0.45
CPSF4-203ENST00000430038 SLC23A3Q6PIS1 610 aa17.86■□□□□ 0.45
CPSF4-203ENST00000430038 PPM1KQ8N3J5 372 aa17.86■□□□□ 0.45
CPSF4-203ENST00000430038 EHBP1Q8NDI1 1231 aa17.86■□□□□ 0.45
CPSF4-203ENST00000430038 OR2I1PQ8NGU4 316 aa17.86■□□□□ 0.45
CPSF4-203ENST00000430038 WFDC5Q8TCV5 224 aa17.86■□□□□ 0.45
CPSF4-203ENST00000430038 NT5C1BQ96P26 610 aa17.86■□□□□ 0.45
CPSF4-203ENST00000430038 DNAI2Q9GZS0 605 aa17.86■□□□□ 0.45
CPSF4-203ENST00000430038 TMEM9BQ9NQ34 198 aa17.86■□□□□ 0.45
CPSF4-203ENST00000430038 ELOVL2Q9NXB9 296 aa17.86■□□□□ 0.45
CPSF4-203ENST00000430038 HESX1Q9UBX0 185 aa17.86■□□□□ 0.45
CPSF4-203ENST00000430038 STOML2Q9UJZ1 356 aa17.86■□□□□ 0.45
CPSF4-203ENST00000430038 AKAP13Q12802 2813 aa17.85■□□□□ 0.45
CPSF4-203ENST00000430038 PAEPP09466 180 aa17.85■□□□□ 0.45
CPSF4-203ENST00000430038 ENGP17813 658 aa17.85■□□□□ 0.45
CPSF4-203ENST00000430038 PRKCHP24723 683 aa17.85■□□□□ 0.45
CPSF4-203ENST00000430038 HLA-FP30511 346 aa17.85■□□□□ 0.45
CPSF4-203ENST00000430038 APBA1Q02410 837 aa17.85■□□□□ 0.45
CPSF4-203ENST00000430038 ZNF33AQ06730 810 aa17.85■□□□□ 0.45
CPSF4-203ENST00000430038 ZNF234Q14588 700 aa17.85■□□□□ 0.45
CPSF4-203ENST00000430038 SPDYCQ5MJ68 293 aa17.85■□□□□ 0.45
CPSF4-203ENST00000430038 SH3PXD2AQ5TCZ1 1133 aa17.85■□□□□ 0.45
CPSF4-203ENST00000430038 SDE2Q6IQ49 451 aa17.85■□□□□ 0.45
CPSF4-203ENST00000430038 SCML4Q8N228 414 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms