RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 HEATR6Q6AI08 1181 aaKnown RBP12.89□□□□□ -0.35
CDH3-202ENST00000429102 ADGRF2Q8IZF7 708 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 FAM49AQ9H0Q0 323 aaPredicted RBP12.89□□□□□ -0.35
CDH3-202ENST00000429102 DDX18Q9NVP1 670 aaKnown RBP12.89□□□□□ -0.35
CDH3-202ENST00000429102 PAK5Q9P286 719 aa12.89□□□□□ -0.35
CDH3-202ENST00000429102 HBS1LQ9Y450 684 aaKnown RBP12.89□□□□□ -0.35
CDH3-202ENST00000429102 TCRBV5S1A1TA0A578 114 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 CAPN8A6NHC0 703 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 PPEF2O14830 753 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 STIP1P31948 543 aaKnown RBP12.88□□□□□ -0.35
CDH3-202ENST00000429102 FKBP1AP62942 108 aaKnown RBP12.88□□□□□ -0.35
CDH3-202ENST00000429102 DLG1Q12959 904 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 NOMO1Q15155 1222 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 DCLK2Q8N568 766 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 KIF12Q96FN5 646 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 ECSITQ9BQ95 431 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 CDT1Q9H211 546 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 PDGFCQ9NRA1 345 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 KLK14Q9P0G3 267 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 SLX4Q8IY92 1834 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 ZBTB7AO95365 584 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 CHRM1P11229 460 aaPredicted RBP12.88□□□□□ -0.35
CDH3-202ENST00000429102 RAG1P15918 1043 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 SLC10A2Q12908 348 aaPredicted RBP12.88□□□□□ -0.35
CDH3-202ENST00000429102 TREML2Q5T2D2 321 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 OR52E8Q6IFG1 317 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 CTU1Q7Z7A3 348 aaKnown RBP12.88□□□□□ -0.35
CDH3-202ENST00000429102 FAM83AQ86UY5 434 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 NLRP7Q8WX94 980 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 SEPT1Q8WYJ6 367 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 USP29Q9HBJ7 922 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 POPDC2Q9HBU9 364 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 PAPSS1O43252 624 aaPredicted RBP12.88□□□□□ -0.35
CDH3-202ENST00000429102 PLA2G6O60733 806 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 HSPA4LO95757 839 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 ENO3P13929 434 aaPredicted RBP12.88□□□□□ -0.35
CDH3-202ENST00000429102 GOT1P17174 413 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 DEUP1Q05D60 604 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 SPDYAQ5MJ70 313 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 PQLC3Q8N755 202 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 ZSCAN18Q8TBC5 510 aaPredicted RBP12.88□□□□□ -0.35
CDH3-202ENST00000429102 GDPD5Q8WTR4 605 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 TEPSINQ96N21 525 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 TUBB6Q9BUF5 446 aa12.88□□□□□ -0.35
CDH3-202ENST00000429102 TTLL12Q14166 644 aaPredicted RBP12.87□□□□□ -0.35
CDH3-202ENST00000429102 CCDC14Q49A88 953 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 PID1Q7Z2X4 250 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 CMASQ8NFW8 434 aaPredicted RBP12.87□□□□□ -0.35
CDH3-202ENST00000429102 SCYL1Q96KG9 808 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 CNBD2Q96M20 576 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 TMEM216Q9P0N5 145 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 CPSF3Q9UKF6 684 aaKnown RBP12.87□□□□□ -0.35
CDH3-202ENST00000429102 MAFBQ9Y5Q3 323 aaPredicted RBP12.87□□□□□ -0.35
CDH3-202ENST00000429102 ADCY6O43306 1168 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 BPGMP07738 259 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 CCDC130P13994 396 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 CYP3A5P20815 502 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 GPD2P43304 727 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 CLDN10P78369 228 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 TAP1Q03518 808 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 IFRD2Q12894 506 aaPredicted RBP12.87□□□□□ -0.35
CDH3-202ENST00000429102 TNFAIP1Q13829 316 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 KCNJ11Q14654 390 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 PPM1LQ5SGD2 360 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 MPZL3Q6UWV2 235 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 SATL1Q86VE3 508 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 USP33Q8TEY7 942 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 FAM136AQ96C01 138 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 CNPY3Q9BT09 278 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 PCDH18Q9HCL0 1135 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 KCNG1Q9UIX4 513 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 RPS6KL1Q9Y6S9 549 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 ADGRA2Q96PE1 1338 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 SIPA1L1O43166 1804 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 STX16-NPEPL1H3BU86 382 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 TRAFD1O14545 582 aaPredicted RBP12.87□□□□□ -0.35
CDH3-202ENST00000429102 TM7SF2O76062 418 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 FARP2O94887 1054 aaPredicted RBP12.87□□□□□ -0.35
CDH3-202ENST00000429102 CCNG1P51959 295 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 COPAP53621 1224 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 MED21Q13503 144 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 EFHC1Q5JVL4 640 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 FAM160B1Q5W0V3 765 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 DPEP3Q9H4B8 488 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 RHBDL2Q9NX52 303 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 CACNG4Q9UBN1 327 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 ADAMTS6Q9UKP5 1117 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 SOX13Q9UN79 622 aa12.87□□□□□ -0.35
CDH3-202ENST00000429102 HMX2A2RU54 273 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 E7ENQ6 273 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 MAFGO15525 162 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 NUDT2P50583 147 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 MRPS22P82650 360 aaKnown RBP12.86□□□□□ -0.35
CDH3-202ENST00000429102 FAM43BQ6ZT52 329 aaPredicted RBP12.86□□□□□ -0.35
CDH3-202ENST00000429102 RNF135Q8IUD6 432 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 RTKN2Q8IZC4 609 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 RDM1Q8NG50 284 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 KCNK4Q9NYG8 393 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 SPDYE16A6NNV3 312 aaPredicted RBP12.86□□□□□ -0.35
CDH3-202ENST00000429102 TBC1D12O60347 775 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms