RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 SMG8Q8ND04 991 aaKnown RBP8.67□□□□□ -1.02
CD44-208ENST00000428726 TRPV1Q8NER1 839 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 KLHL29Q96CT2 875 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 FAXDC2Q96IV6 333 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 RNF157Q96PX1 679 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 CNPY3Q9BT09 278 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 ZC3H7BQ9UGR2 993 aaKnown RBP8.67□□□□□ -1.02
CD44-208ENST00000428726 RABGEF1Q9UJ41 708 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 PTGESO14684 152 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 APOL1O14791 398 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 BUD23O43709 281 aaKnown RBP8.67□□□□□ -1.02
CD44-208ENST00000428726 ERVK-10P10266 1014 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 TAC1P20366 129 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 ELF1P32519 619 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 GATMP50440 423 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 ARL4CP56559 192 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 SLC6A3Q01959 620 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 PEX6Q13608 980 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 ARHGAP36Q6ZRI8 547 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 PID1Q7Z2X4 250 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 RELL1Q8IUW5 271 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 NIPA2Q8N8Q9 360 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 MAML1Q92585 1016 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 NFKBIZQ9BYH8 718 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 LHX5Q9H2C1 402 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 CAB39LQ9H9S4 337 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 PIGVQ9NUD9 493 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 PHTF1Q9UMS5 762 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 PSAT1Q9Y617 370 aa8.67□□□□□ -1.02
CD44-208ENST00000428726 CFAP69A5D8W1 941 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 FAM47DPA6NHR8 397 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 SNX3O60493 162 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 AOC2O75106 756 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 TCEA3O75764 348 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 AP1G2O75843 785 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 ANP32DO95626 131 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 TBX18O95935 607 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 INHBAP08476 426 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 PTPN7P35236 360 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 FLT3LGP49771 235 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 POU5F1BQ06416 359 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 RCN2Q14257 317 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 DLG2Q15700 870 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 PLEKHG4Q58EX7 1191 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 BBS12Q6ZW61 710 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 SPATA21Q7Z572 469 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 TRABD2AQ86V40 505 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 ECHDC2Q86YB7 292 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 SIX6OS1Q8N1H7 587 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 MICAL1Q8TDZ2 1067 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 SLC35F5Q8WV83 523 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 MCRS1Q96EZ8 462 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 SNX27Q96L92 541 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 CCDC134Q9H6E4 229 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 VTA1Q9NP79 307 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 DDIT4Q9NX09 232 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 TSR3Q9UJK0 312 aaKnown RBP8.66□□□□□ -1.02
CD44-208ENST00000428726 DRG1Q9Y295 367 aaKnown RBP8.66□□□□□ -1.02
CD44-208ENST00000428726 SBF1O95248 1867 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 SPTBN5Q9NRC6 3674 aaKnown RBP8.66□□□□□ -1.02
CD44-208ENST00000428726 A0A0U1RQS6 177 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 MGEA5O60502 916 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 LYPLA1O75608 230 aaPredicted RBP8.66□□□□□ -1.02
CD44-208ENST00000428726 MT-ND3P03897 115 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 VAV1P15498 845 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 MGAT1P26572 445 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 PSMB4P28070 264 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 CCND3P30281 292 aaPredicted RBP8.66□□□□□ -1.02
CD44-208ENST00000428726 AVPR1AP37288 418 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 ATXN3P54252 364 aaPredicted RBP8.66□□□□□ -1.02
CD44-208ENST00000428726 LCLAT1Q6UWP7 414 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 CMC1Q7Z7K0 106 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 PPIL6Q8IXY8 311 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 NAT8LQ8N9F0 302 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 B3GALNT2Q8NCR0 500 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 SHKBP1Q8TBC3 707 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 LRRC8CQ8TDW0 803 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 PGBD4Q96DM1 585 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 SENP8Q96LD8 212 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 ZNF778Q96MU6 729 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 PARK7Q99497 189 aaKnown RBP8.66□□□□□ -1.02
CD44-208ENST00000428726 ASB7Q9H672 318 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 CPSF2Q9P2I0 782 aaKnown RBP8.66□□□□□ -1.02
CD44-208ENST00000428726 FIS1Q9Y3D6 152 aa8.66□□□□□ -1.02
CD44-208ENST00000428726 FAM237BA0A1B0GVD1 139 aa8.65□□□□□ -1.02
CD44-208ENST00000428726 C17orf102A2RUQ5 167 aa8.65□□□□□ -1.02
CD44-208ENST00000428726 IQCA1LA6NCM1 817 aa8.65□□□□□ -1.02
CD44-208ENST00000428726 NDC80O14777 642 aa8.65□□□□□ -1.02
CD44-208ENST00000428726 ZNF865P0CJ78 1059 aaPredicted RBP8.65□□□□□ -1.02
CD44-208ENST00000428726 CSH1P0DML2 217 aa8.65□□□□□ -1.02
CD44-208ENST00000428726 CSH2P0DML3 217 aa8.65□□□□□ -1.02
CD44-208ENST00000428726 GRB14Q14449 540 aa8.65□□□□□ -1.02
CD44-208ENST00000428726 ZNF268Q14587 947 aaPredicted RBP8.65□□□□□ -1.02
CD44-208ENST00000428726 FAM187BQ17R55 369 aa8.65□□□□□ -1.02
CD44-208ENST00000428726 SWT1Q5T5J6 900 aaKnown RBP8.65□□□□□ -1.02
CD44-208ENST00000428726 ARHGEF18Q6ZSZ5 1173 aa8.65□□□□□ -1.02
CD44-208ENST00000428726 TFAP2DQ7Z6R9 452 aa8.65□□□□□ -1.02
CD44-208ENST00000428726 MTDHQ86UE4 582 aaKnown RBP8.65□□□□□ -1.02
CD44-208ENST00000428726 TNS4Q8IZW8 715 aa8.65□□□□□ -1.02
CD44-208ENST00000428726 TTC9BQ8N6N2 239 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms