RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 HPSEQ9Y251 543 aa17.36■□□□□ 0.37
VARS-216ENST00000428445 SLCO1B1Q9Y6L6 691 aa17.36■□□□□ 0.37
VARS-216ENST00000428445 LAMA5O15230 3695 aa17.35■□□□□ 0.37
VARS-216ENST00000428445 FREM2Q5SZK8 3169 aa17.35■□□□□ 0.37
VARS-216ENST00000428445 TMEM8BA6NDV4 472 aa17.35■□□□□ 0.37
VARS-216ENST00000428445 MEI4A8MW99 385 aa17.35■□□□□ 0.37
VARS-216ENST00000428445 TSPAN3O60637 253 aa17.35■□□□□ 0.37
VARS-216ENST00000428445 KRT13P13646 458 aa17.35■□□□□ 0.37
VARS-216ENST00000428445 HLA-EP13747 358 aa17.35■□□□□ 0.37
VARS-216ENST00000428445 TRIM21P19474 475 aaKnown RBP17.35■□□□□ 0.37
VARS-216ENST00000428445 TPMTP51580 245 aa17.35■□□□□ 0.37
VARS-216ENST00000428445 RAD23BP54727 409 aa17.35■□□□□ 0.37
VARS-216ENST00000428445 BNC1Q01954 994 aa17.35■□□□□ 0.37
VARS-216ENST00000428445 ADAM9Q13443 819 aa17.35■□□□□ 0.37
VARS-216ENST00000428445 ZNF234Q14588 700 aa17.35■□□□□ 0.37
VARS-216ENST00000428445 DCAF12L1Q5VU92 463 aa17.35■□□□□ 0.37
VARS-216ENST00000428445 RABEPKQ7Z6M1 372 aa17.35■□□□□ 0.37
VARS-216ENST00000428445 RAB44Q7Z6P3 723 aaPredicted RBP17.35■□□□□ 0.37
VARS-216ENST00000428445 FAM124AQ86V42 546 aa17.35■□□□□ 0.37
VARS-216ENST00000428445 PIGZQ86VD9 579 aa17.35■□□□□ 0.37
VARS-216ENST00000428445 SMYD4Q8IYR2 804 aaPredicted RBP17.35■□□□□ 0.37
VARS-216ENST00000428445 FAM124BQ9H5Z6 455 aaPredicted RBP17.35■□□□□ 0.37
VARS-216ENST00000428445 CLIC5Q9NZA1 410 aa17.35■□□□□ 0.37
VARS-216ENST00000428445 USP36Q9P275 1121 aaKnown RBP17.35■□□□□ 0.37
VARS-216ENST00000428445 SLC27A6Q9Y2P4 619 aa17.35■□□□□ 0.37
VARS-216ENST00000428445 PCDHB9Q9Y5E1 797 aa17.35■□□□□ 0.37
VARS-216ENST00000428445 DSPP15924 2871 aaKnown RBP17.35■□□□□ 0.37
VARS-216ENST00000428445 RHOBTB3O94955 611 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 CAPNS1P04632 268 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 GNSP15586 552 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 SYKP43405 635 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 PSEN1P49768 467 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 COPAP53621 1224 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 YWHAGP61981 247 aaKnown RBP eCLIP17.34■□□□□ 0.37
VARS-216ENST00000428445 COG7P83436 770 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 DPYDQ12882 1025 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 STARD3Q14849 445 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 WDR45BQ5MNZ6 344 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 INTS8Q75QN2 995 aaKnown RBP17.34■□□□□ 0.37
VARS-216ENST00000428445 PKD1L2Q7Z442 2459 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 SLCO6A1Q86UG4 719 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 NAXDQ8IW45 347 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 HSCBQ8IWL3 235 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 ZNF276Q8N554 614 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 ZNF366Q8N895 744 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 RBBP8NLQ8NC74 664 aaPredicted RBP17.34■□□□□ 0.37
VARS-216ENST00000428445 DDI1Q8WTU0 396 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 FOXJ1Q92949 421 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 SIPA1Q96FS4 1042 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 TMEM176AQ96HP8 235 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 CIPCQ9C0C6 399 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 TMEM8AQ9HCN3 771 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 CISHQ9NSE2 258 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 ELOVL2Q9NXB9 296 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 MARCH2Q9P0N8 246 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 SFMBT1Q9UHJ3 866 aa17.34■□□□□ 0.37
VARS-216ENST00000428445 KNL1Q8NG31 2342 aa17.33■□□□□ 0.37
VARS-216ENST00000428445 CKAP5Q14008 2032 aa17.33■□□□□ 0.37
VARS-216ENST00000428445 MAPK13O15264 365 aa17.33■□□□□ 0.36
VARS-216ENST00000428445 SYNCRIPO60506 623 aaKnown RBP17.33■□□□□ 0.36
VARS-216ENST00000428445 EPHX1P07099 455 aa17.33■□□□□ 0.36
VARS-216ENST00000428445 FTH1P19P0C7X4 201 aa17.33■□□□□ 0.36
VARS-216ENST00000428445 CHKAP35790 457 aa17.33■□□□□ 0.36
VARS-216ENST00000428445 PSMC2P35998 433 aaKnown RBP17.33■□□□□ 0.36
VARS-216ENST00000428445 TKTL1P51854 596 aa17.33■□□□□ 0.36
VARS-216ENST00000428445 ENPEPQ07075 957 aa17.33■□□□□ 0.36
VARS-216ENST00000428445 ENPP2Q13822 863 aa17.33■□□□□ 0.36
VARS-216ENST00000428445 RSRC2Q7L4I2 434 aaKnown RBP17.33■□□□□ 0.36
VARS-216ENST00000428445 BHLHA9Q7RTU4 235 aa17.33■□□□□ 0.36
VARS-216ENST00000428445 TADA2BQ86TJ2 420 aa17.33■□□□□ 0.36
VARS-216ENST00000428445 MARCH9Q86YJ5 346 aa17.33■□□□□ 0.36
VARS-216ENST00000428445 CYB5D2Q8WUJ1 264 aa17.33■□□□□ 0.36
VARS-216ENST00000428445 DNASE2BQ8WZ79 361 aa17.33■□□□□ 0.36
VARS-216ENST00000428445 ULBP1Q9BZM6 244 aa17.33■□□□□ 0.36
VARS-216ENST00000428445 EIF2B4Q9UI10 523 aaKnown RBP17.33■□□□□ 0.36
VARS-216ENST00000428445 ZNF510Q9Y2H8 683 aa17.33■□□□□ 0.36
VARS-216ENST00000428445 ZDHHC9Q9Y397 364 aa17.33■□□□□ 0.36
VARS-216ENST00000428445 NBEAQ8NFP9 2946 aa17.33■□□□□ 0.36
VARS-216ENST00000428445 A0A1B0GTW7 788 aa17.32■□□□□ 0.36
VARS-216ENST00000428445 FAM221BA6H8Z2 402 aa17.32■□□□□ 0.36
VARS-216ENST00000428445 METTL12A8MUP2 240 aa17.32■□□□□ 0.36
VARS-216ENST00000428445 SCAPQ12770 1279 aa17.32■□□□□ 0.36
VARS-216ENST00000428445 NFIL3Q16649 462 aa17.32■□□□□ 0.36
VARS-216ENST00000428445 RAB41Q5JT25 222 aa17.32■□□□□ 0.36
VARS-216ENST00000428445 KRT39Q6A163 491 aa17.32■□□□□ 0.36
VARS-216ENST00000428445 C19orf48Q6RUI8 117 aa17.32■□□□□ 0.36
VARS-216ENST00000428445 LRSAM1Q6UWE0 723 aa17.32■□□□□ 0.36
VARS-216ENST00000428445 ANKS1BQ7Z6G8 1248 aa17.32■□□□□ 0.36
VARS-216ENST00000428445 METTL3Q86U44 580 aaKnown RBP17.32■□□□□ 0.36
VARS-216ENST00000428445 CCDC150Q8NCX0 1101 aa17.32■□□□□ 0.36
VARS-216ENST00000428445 UBA3Q8TBC4 463 aa17.32■□□□□ 0.36
VARS-216ENST00000428445 SETD7Q8WTS6 366 aaKnown RBP17.32■□□□□ 0.36
VARS-216ENST00000428445 EDEM1Q92611 657 aa17.32■□□□□ 0.36
VARS-216ENST00000428445 PRCCQ92733 491 aaPredicted RBP17.32■□□□□ 0.36
VARS-216ENST00000428445 SPATA32Q96LK8 384 aa17.32■□□□□ 0.36
VARS-216ENST00000428445 DCLK3Q9C098 648 aa17.32■□□□□ 0.36
VARS-216ENST00000428445 DNAI2Q9GZS0 605 aa17.32■□□□□ 0.36
VARS-216ENST00000428445 GOLPH3LQ9H4A5 285 aa17.32■□□□□ 0.36
VARS-216ENST00000428445 GAREM1Q9H706 876 aa17.32■□□□□ 0.36
VARS-216ENST00000428445 RAB20Q9NX57 234 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms