RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 TPCN2Q8NHX9 752 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 KIAA1524Q8TCG1 905 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 ATRIPQ8WXE1 791 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 USP13Q92995 863 aaPredicted RBP16.04■□□□□ 0.16
COL11A1-204ENST00000427239 RNF34Q969K3 372 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 PLD4Q96BZ4 506 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 SLC39A13Q96H72 371 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 BTBD6Q96KE9 485 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 ZFRQ96KR1 1074 aaKnown RBP16.04■□□□□ 0.16
COL11A1-204ENST00000427239 MYADMQ96S97 322 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 WDCPQ9H6R7 721 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 GKN1Q9NS71 199 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 PIGVQ9NUD9 493 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 EPS15L1Q9UBC2 864 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 TRIM10Q9UDY6 481 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 NR2E1Q9Y466 385 aa16.04■□□□□ 0.16
COL11A1-204ENST00000427239 BUB1BO60566 1050 aaPredicted RBP16.03■□□□□ 0.16
COL11A1-204ENST00000427239 IGLV3-27P01718 113 aa16.03■□□□□ 0.16
COL11A1-204ENST00000427239 HARS2P49590 506 aaKnown RBP16.03■□□□□ 0.16
COL11A1-204ENST00000427239 HDAC4P56524 1084 aa16.03■□□□□ 0.16
COL11A1-204ENST00000427239 BRMS1LQ5PSV4 323 aa16.03■□□□□ 0.16
COL11A1-204ENST00000427239 OTUD1Q5VV17 481 aaPredicted RBP16.03■□□□□ 0.16
COL11A1-204ENST00000427239 C11orf63Q6NUN7 778 aa16.03■□□□□ 0.16
COL11A1-204ENST00000427239 CCAR2Q8N163 923 aaKnown RBP16.03■□□□□ 0.16
COL11A1-204ENST00000427239 KIAA1958Q8N8K9 716 aa16.03■□□□□ 0.16
COL11A1-204ENST00000427239 ADAM33Q9BZ11 813 aa16.03■□□□□ 0.16
COL11A1-204ENST00000427239 DCLK3Q9C098 648 aa16.03■□□□□ 0.16
COL11A1-204ENST00000427239 SMPD4Q9NXE4 827 aa16.03■□□□□ 0.16
COL11A1-204ENST00000427239 TRMT1Q9NXH9 659 aaKnown RBP16.03■□□□□ 0.16
COL11A1-204ENST00000427239 OBP2AQ9NY56 170 aa16.03■□□□□ 0.16
COL11A1-204ENST00000427239 CALCOCO1Q9P1Z2 691 aa16.03■□□□□ 0.16
COL11A1-204ENST00000427239 SLC12A6Q9UHW9 1150 aa16.03■□□□□ 0.16
COL11A1-204ENST00000427239 ANAPC1Q9H1A4 1944 aa16.03■□□□□ 0.16
COL11A1-204ENST00000427239 SYNJ2BP-COX16A0A087WUM0 186 aa16.02■□□□□ 0.16
COL11A1-204ENST00000427239 MSI1O43347 362 aaKnown RBP16.02■□□□□ 0.16
COL11A1-204ENST00000427239 AIF1P55008 147 aa16.02■□□□□ 0.16
COL11A1-204ENST00000427239 ZXDBP98169 803 aa16.02■□□□□ 0.16
COL11A1-204ENST00000427239 TFF2Q03403 129 aa16.02■□□□□ 0.16
COL11A1-204ENST00000427239 ARL13BQ3SXY8 428 aa16.02■□□□□ 0.16
COL11A1-204ENST00000427239 ACBD5Q5T8D3 534 aaPredicted RBP16.02■□□□□ 0.16
COL11A1-204ENST00000427239 DAAM2Q86T65 1068 aa16.02■□□□□ 0.16
COL11A1-204ENST00000427239 SYCE1Q8N0S2 351 aa16.02■□□□□ 0.16
COL11A1-204ENST00000427239 AZIN2Q96A70 460 aa16.02■□□□□ 0.16
COL11A1-204ENST00000427239 ZFP14Q9HCL3 533 aa16.02■□□□□ 0.16
COL11A1-204ENST00000427239 COX16Q9P0S2 106 aa16.02■□□□□ 0.16
COL11A1-204ENST00000427239 THEGQ9P2T0 379 aa16.02■□□□□ 0.16
COL11A1-204ENST00000427239 ZNF510Q9Y2H8 683 aa16.02■□□□□ 0.16
COL11A1-204ENST00000427239 ALG6Q9Y672 507 aa16.02■□□□□ 0.16
COL11A1-204ENST00000427239 DENND4CQ5VZ89 1909 aa16.02■□□□□ 0.16
COL11A1-204ENST00000427239 E2F8A0AVK6 867 aa16.02■□□□□ 0.15
COL11A1-204ENST00000427239 LEFTY2O00292 366 aa16.02■□□□□ 0.15
COL11A1-204ENST00000427239 LRCH4O75427 683 aa16.02■□□□□ 0.15
COL11A1-204ENST00000427239 STC2O76061 302 aa16.02■□□□□ 0.15
COL11A1-204ENST00000427239 APOEP02649 317 aa16.02■□□□□ 0.15
COL11A1-204ENST00000427239 HADHQ16836 314 aaKnown RBP16.02■□□□□ 0.15
COL11A1-204ENST00000427239 ZC3H12AQ5D1E8 599 aaKnown RBP16.02■□□□□ 0.15
COL11A1-204ENST00000427239 CC2D1AQ6P1N0 951 aaPredicted RBP16.02■□□□□ 0.15
COL11A1-204ENST00000427239 HTR3DQ70Z44 454 aa16.02■□□□□ 0.15
COL11A1-204ENST00000427239 MTSS1LQ765P7 747 aa16.02■□□□□ 0.15
COL11A1-204ENST00000427239 ARFGAP1Q8N6T3 406 aa16.02■□□□□ 0.15
COL11A1-204ENST00000427239 SH3RF2Q8TEC5 729 aa16.02■□□□□ 0.15
COL11A1-204ENST00000427239 FCRL2Q96LA5 508 aaPredicted RBP16.02■□□□□ 0.15
COL11A1-204ENST00000427239 LSM7Q9UK45 103 aaKnown RBP16.02■□□□□ 0.15
COL11A1-204ENST00000427239 CCL26Q9Y258 94 aa16.02■□□□□ 0.15
COL11A1-204ENST00000427239 ZKSCAN5Q9Y2L8 839 aa16.02■□□□□ 0.15
COL11A1-204ENST00000427239 OBSL1O75147 1896 aa16.01■□□□□ 0.15
COL11A1-204ENST00000427239 KCNU1A8MYU2 1149 aa16.01■□□□□ 0.15
COL11A1-204ENST00000427239 PRPSAP2O60256 369 aa16.01■□□□□ 0.15
COL11A1-204ENST00000427239 MOCS3O95396 460 aa16.01■□□□□ 0.15
COL11A1-204ENST00000427239 PRAMEF12O95522 483 aa16.01■□□□□ 0.15
COL11A1-204ENST00000427239 HMBSP08397 361 aa16.01■□□□□ 0.15
COL11A1-204ENST00000427239 MIPP30301 263 aa16.01■□□□□ 0.15
COL11A1-204ENST00000427239 KCNQ1P51787 676 aa16.01■□□□□ 0.15
COL11A1-204ENST00000427239 BOLA3Q53S33 107 aa16.01■□□□□ 0.15
COL11A1-204ENST00000427239 SCYL2Q6P3W7 929 aa16.01■□□□□ 0.15
COL11A1-204ENST00000427239 SLFN11Q7Z7L1 901 aa16.01■□□□□ 0.15
COL11A1-204ENST00000427239 FAM131BQ86XD5 332 aa16.01■□□□□ 0.15
COL11A1-204ENST00000427239 ATP6V0D2Q8N8Y2 350 aa16.01■□□□□ 0.15
COL11A1-204ENST00000427239 TDRD5Q8NAT2 981 aaKnown RBP16.01■□□□□ 0.15
COL11A1-204ENST00000427239 TRIM58Q8NG06 486 aa16.01■□□□□ 0.15
COL11A1-204ENST00000427239 ADAMTS19Q8TE59 1207 aa16.01■□□□□ 0.15
COL11A1-204ENST00000427239 ELSPBP1Q96BH3 223 aa16.01■□□□□ 0.15
COL11A1-204ENST00000427239 BTN2A3PQ96KV6 586 aa16.01■□□□□ 0.15
COL11A1-204ENST00000427239 ALS2CR12Q96Q35 445 aa16.01■□□□□ 0.15
COL11A1-204ENST00000427239 SMG9Q9H0W8 520 aaKnown RBP16.01■□□□□ 0.15
COL11A1-204ENST00000427239 PRDM6Q9NQX0 595 aa16.01■□□□□ 0.15
COL11A1-204ENST00000427239 ARHGEF38Q9NXL2 777 aa16.01■□□□□ 0.15
COL11A1-204ENST00000427239 CFAP97Q9P2B7 532 aa16.01■□□□□ 0.15
COL11A1-204ENST00000427239 USP18Q9UMW8 372 aa16.01■□□□□ 0.15
COL11A1-204ENST00000427239 SH3BP1Q9Y3L3 701 aa16.01■□□□□ 0.15
COL11A1-204ENST00000427239 LATS1O95835 1130 aa16■□□□□ 0.15
COL11A1-204ENST00000427239 ADRA1BP35368 520 aa16■□□□□ 0.15
COL11A1-204ENST00000427239 SLC11A2P49281 568 aa16■□□□□ 0.15
COL11A1-204ENST00000427239 ATXN1P54253 815 aaKnown RBP16■□□□□ 0.15
COL11A1-204ENST00000427239 ZDHHC14Q8IZN3 488 aa16■□□□□ 0.15
COL11A1-204ENST00000427239 LRRC57Q8N9N7 239 aa16■□□□□ 0.15
COL11A1-204ENST00000427239 ATXN2LQ8WWM7 1075 aaKnown RBP16■□□□□ 0.15
COL11A1-204ENST00000427239 NXPE3Q969Y0 559 aa16■□□□□ 0.15
COL11A1-204ENST00000427239 NTAN1Q96AB6 310 aa16■□□□□ 0.15
COL11A1-204ENST00000427239 TKTL2Q9H0I9 626 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms