RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 ZNF449Q6P9G9 518 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 CES3Q6UWW8 571 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 DSTYKQ6XUX3 929 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 CLEC20AQ6ZU45 233 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 OTOAQ7RTW8 1153 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 LRRC6Q86X45 466 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 PDCD7Q8N8D1 485 aaKnown RBP11.97□□□□□ -0.49
UBR4-207ENST00000425413 ANKLE1Q8NAG6 615 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 MZB1Q8WU39 189 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 DEPDC1BQ8WUY9 529 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 KLHL29Q96CT2 875 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 TBC1D31Q96DN5 1066 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 ARHGAP39Q9C0H5 1083 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 PLAC1Q9HBJ0 212 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 POPDC2Q9HBU9 364 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 ARHGEF4Q9NR80 690 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 PRKAG3Q9UGI9 489 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 INPP5FQ9Y2H2 1132 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 TTLL3Q9Y4R7 772 aa11.97□□□□□ -0.49
UBR4-207ENST00000425413 CCDC195A0A1B0GUA6 201 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 E2F8A0AVK6 867 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 YJEFN3A6XGL0 299 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 A8MUI8 341 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 E7ENQ6 273 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 FAM72CH0Y354 149 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 AP1G2O75843 785 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 POMCP01189 267 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 USP17L7P0C7H9 530 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 NPR3P17342 541 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 AXLP30530 894 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 PNPLA4P41247 253 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 FKBP1BP68106 108 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 FAM72AQ5TYM5 149 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 FAM72DQ6L9T8 149 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 UNC5AQ6ZN44 842 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 CDHR3Q6ZTQ4 885 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 FAM72BQ86X60 149 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 VSIG1Q86XK7 387 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 ZDHHC17Q8IUH5 632 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 BANPQ8N9N5 519 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 SLC44A1Q8WWI5 657 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 AGAP3Q96P47 875 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 TMEM237Q96Q45 408 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 C11orf84Q9BUA3 381 aaPredicted RBP11.96□□□□□ -0.49
UBR4-207ENST00000425413 MECRQ9BV79 373 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 DUSP16Q9BY84 665 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 MYLK2Q9H1R3 596 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 CRTAC1Q9NQ79 661 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 PIGVQ9NUD9 493 aa11.96□□□□□ -0.49
UBR4-207ENST00000425413 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.96□□□□□ -0.49
UBR4-207ENST00000425413 A0A0G2JND7 137 aa11.96□□□□□ -0.5
UBR4-207ENST00000425413 IQANK1A0A1B0GTG1 560 aa11.96□□□□□ -0.5
UBR4-207ENST00000425413 C2orf71A6NGG8 1288 aa11.96□□□□□ -0.5
UBR4-207ENST00000425413 M0QZ92 97 aa11.96□□□□□ -0.5
UBR4-207ENST00000425413 XPO1O14980 1071 aaKnown RBP11.96□□□□□ -0.5
UBR4-207ENST00000425413 CHUKO15111 745 aa11.96□□□□□ -0.5
UBR4-207ENST00000425413 EDF1O60869 148 aaKnown RBP11.96□□□□□ -0.5
UBR4-207ENST00000425413 USP12O75317 370 aa11.96□□□□□ -0.5
UBR4-207ENST00000425413 CSH1P0DML2 217 aa11.96□□□□□ -0.5
UBR4-207ENST00000425413 CSH2P0DML3 217 aa11.96□□□□□ -0.5
UBR4-207ENST00000425413 CTGFP29279 349 aa11.96□□□□□ -0.5
UBR4-207ENST00000425413 ELF3P78545 371 aaPredicted RBP11.96□□□□□ -0.5
UBR4-207ENST00000425413 MRPS5P82675 430 aaKnown RBP11.96□□□□□ -0.5
UBR4-207ENST00000425413 DEUP1Q05D60 604 aa11.96□□□□□ -0.5
UBR4-207ENST00000425413 TRIM32Q13049 653 aa11.96□□□□□ -0.5
UBR4-207ENST00000425413 EFHC1Q5JVL4 640 aa11.96□□□□□ -0.5
UBR4-207ENST00000425413 GDF6Q6KF10 455 aaPredicted RBP11.96□□□□□ -0.5
UBR4-207ENST00000425413 TRPV1Q8NER1 839 aa11.96□□□□□ -0.5
UBR4-207ENST00000425413 CENPIQ92674 756 aaPredicted RBP11.96□□□□□ -0.5
UBR4-207ENST00000425413 DHRS4Q9BTZ2 278 aa11.96□□□□□ -0.5
UBR4-207ENST00000425413 WDR27A2RRH5 827 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 BGNP21810 368 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 TARSP26639 723 aaKnown RBP11.95□□□□□ -0.5
UBR4-207ENST00000425413 ACADSBP45954 432 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 XRCC4Q13426 336 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 SLC25A52Q3SY17 297 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 OTUD1Q5VV17 481 aaPredicted RBP11.95□□□□□ -0.5
UBR4-207ENST00000425413 RNF139Q8WU17 664 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 TFB1MQ8WVM0 346 aaKnown RBP11.95□□□□□ -0.5
UBR4-207ENST00000425413 HTR3CQ8WXA8 447 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 HSFY1Q96LI6 401 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 IQCGQ9H095 443 aaKnown RBP11.95□□□□□ -0.5
UBR4-207ENST00000425413 FAM105AQ9NUU6 356 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 ZSWIM8A7E2V4 1837 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 CFAP69A5D8W1 941 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 RNF103O00237 685 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 DNAJC8O75937 253 aaPredicted RBP11.95□□□□□ -0.5
UBR4-207ENST00000425413 ZWINTO95229 277 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 FAM200BP0CF97 657 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 NCAM1P13591 858 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 RGS2P41220 211 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 ANKRD20A2Q5SQ80 823 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 ANKRD20A1Q5TYW2 823 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 ANKRD20A3Q5VUR7 823 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 ZNF534Q76KX8 674 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 COLGALT1Q8NBJ5 622 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 GSTCDQ8NEC7 633 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 RFWD2Q8NHY2 731 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 PCED1BQ96HM7 432 aa11.95□□□□□ -0.5
UBR4-207ENST00000425413 HNRNPABQ99729 332 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms