RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 DPYDQ12882 1025 aa15.73■□□□□ 0.11
ATG4B-209ENST00000425239 PM20D1Q6GTS8 502 aa15.73■□□□□ 0.11
ATG4B-209ENST00000425239 DBX2Q6ZNG2 339 aa15.73■□□□□ 0.11
ATG4B-209ENST00000425239 INTS8Q75QN2 995 aaKnown RBP15.73■□□□□ 0.11
ATG4B-209ENST00000425239 TOE1Q96GM8 510 aaKnown RBP15.73■□□□□ 0.11
ATG4B-209ENST00000425239 NIF3L1Q9GZT8 377 aa15.73■□□□□ 0.11
ATG4B-209ENST00000425239 FAM124BQ9H5Z6 455 aaPredicted RBP15.73■□□□□ 0.11
ATG4B-209ENST00000425239 PRDM16Q9HAZ2 1276 aa15.73■□□□□ 0.11
ATG4B-209ENST00000425239 ZNF510Q9Y2H8 683 aa15.73■□□□□ 0.11
ATG4B-209ENST00000425239 ZDHHC9Q9Y397 364 aa15.73■□□□□ 0.11
ATG4B-209ENST00000425239 BAHCC1Q9P281 2608 aa15.73■□□□□ 0.11
ATG4B-209ENST00000425239 CALUO43852 315 aaPredicted RBP15.72■□□□□ 0.11
ATG4B-209ENST00000425239 CHKAP35790 457 aa15.72■□□□□ 0.11
ATG4B-209ENST00000425239 TPMTP51580 245 aa15.72■□□□□ 0.11
ATG4B-209ENST00000425239 RAD23BP54727 409 aa15.72■□□□□ 0.11
ATG4B-209ENST00000425239 TRIP6Q15654 476 aaKnown RBP15.72■□□□□ 0.11
ATG4B-209ENST00000425239 PLEKHG6Q3KR16 790 aa15.72■□□□□ 0.11
ATG4B-209ENST00000425239 CPXM2Q8N436 756 aa15.72■□□□□ 0.11
ATG4B-209ENST00000425239 CADM4Q8NFZ8 388 aa15.72■□□□□ 0.11
ATG4B-209ENST00000425239 ZCCHC14Q8WYQ9 949 aaKnown RBP15.72■□□□□ 0.11
ATG4B-209ENST00000425239 FOXJ1Q92949 421 aa15.72■□□□□ 0.11
ATG4B-209ENST00000425239 FAXDC2Q96IV6 333 aa15.72■□□□□ 0.11
ATG4B-209ENST00000425239 TMEM8AQ9HCN3 771 aa15.72■□□□□ 0.11
ATG4B-209ENST00000425239 ELOVL2Q9NXB9 296 aa15.72■□□□□ 0.11
ATG4B-209ENST00000425239 USP25Q9UHP3 1055 aa15.72■□□□□ 0.11
ATG4B-209ENST00000425239 MAPK8IP1Q9UQF2 711 aa15.72■□□□□ 0.11
ATG4B-209ENST00000425239 METTL12A8MUP2 240 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 TULP2O00295 520 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 NPC1O15118 1278 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 NDUFS2O75306 463 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 CLSTN1O94985 981 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 CORO1AP31146 461 aaKnown RBP15.71■□□□□ 0.11
ATG4B-209ENST00000425239 RING1Q06587 406 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 EFEMP1Q12805 493 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 GRIK2Q13002 908 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 HNRNPDQ14103 355 aaKnown RBP15.71■□□□□ 0.11
ATG4B-209ENST00000425239 ZNF234Q14588 700 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 ZNF423Q2M1K9 1284 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 ZNF394Q53GI3 561 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 SYCP2LQ5T4T6 812 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 ARHGAP17Q68EM7 881 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 LRSAM1Q6UWE0 723 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 SLCO6A1Q86UG4 719 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 PIGZQ86VD9 579 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 TMPRSS6Q8IU80 811 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 DENND1CQ8IV53 801 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 RGL4Q8IZJ4 473 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 GUF1Q8N442 669 aaKnown RBP15.71■□□□□ 0.11
ATG4B-209ENST00000425239 ADAMTS14Q8WXS8 1223 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 TATDN2Q93075 761 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 ARID3AQ99856 593 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 GPR174Q9BXC1 333 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 DCLK3Q9C098 648 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 SLCO1B1Q9Y6L6 691 aa15.71■□□□□ 0.11
ATG4B-209ENST00000425239 PTPRBP23467 1997 aa15.7■□□□□ 0.1
ATG4B-209ENST00000425239 ZBTB24O43167 697 aaPredicted RBP15.7■□□□□ 0.1
ATG4B-209ENST00000425239 RALAP11233 206 aa15.7■□□□□ 0.1
ATG4B-209ENST00000425239 NCAM1P13591 858 aa15.7■□□□□ 0.1
ATG4B-209ENST00000425239 PRKCHP24723 683 aa15.7■□□□□ 0.1
ATG4B-209ENST00000425239 GTF2H1P32780 548 aa15.7■□□□□ 0.1
ATG4B-209ENST00000425239 PSMC2P35998 433 aaKnown RBP15.7■□□□□ 0.1
ATG4B-209ENST00000425239 NDUFA8P51970 172 aa15.7■□□□□ 0.1
ATG4B-209ENST00000425239 ADAM9Q13443 819 aa15.7■□□□□ 0.1
ATG4B-209ENST00000425239 TRIP4Q15650 581 aaPredicted RBP15.7■□□□□ 0.1
ATG4B-209ENST00000425239 WDR45BQ5MNZ6 344 aa15.7■□□□□ 0.1
ATG4B-209ENST00000425239 KRT39Q6A163 491 aa15.7■□□□□ 0.1
ATG4B-209ENST00000425239 KIAA1324Q6UXG2 1013 aaKnown RBP15.7■□□□□ 0.1
ATG4B-209ENST00000425239 KIAA0907Q7Z7F0 614 aaPredicted RBP15.7■□□□□ 0.1
ATG4B-209ENST00000425239 GLRX5Q86SX6 157 aa15.7■□□□□ 0.1
ATG4B-209ENST00000425239 TADA2BQ86TJ2 420 aa15.7■□□□□ 0.1
ATG4B-209ENST00000425239 PROSER1Q86XN7 944 aa15.7■□□□□ 0.1
ATG4B-209ENST00000425239 FAM186BQ8IYM0 893 aa15.7■□□□□ 0.1
ATG4B-209ENST00000425239 PNPLA1Q8N8W4 532 aa15.7■□□□□ 0.1
ATG4B-209ENST00000425239 ANKRD52Q8NB46 1076 aa15.7■□□□□ 0.1
ATG4B-209ENST00000425239 BAHD1Q8TBE0 780 aaPredicted RBP15.7■□□□□ 0.1
ATG4B-209ENST00000425239 SORCS1Q8WY21 1168 aa15.7■□□□□ 0.1
ATG4B-209ENST00000425239 NDRG1Q92597 394 aaKnown RBP15.7■□□□□ 0.1
ATG4B-209ENST00000425239 TMEM176AQ96HP8 235 aa15.7■□□□□ 0.1
ATG4B-209ENST00000425239 HEXIM2Q96MH2 286 aaKnown RBP15.7■□□□□ 0.1
ATG4B-209ENST00000425239 CDK5RAP1Q96SZ6 601 aaKnown RBP15.7■□□□□ 0.1
ATG4B-209ENST00000425239 SLC2A11Q9BYW1 496 aa15.7■□□□□ 0.1
ATG4B-209ENST00000425239 IL21RQ9HBE5 538 aa15.7■□□□□ 0.1
ATG4B-209ENST00000425239 CISHQ9NSE2 258 aa15.7■□□□□ 0.1
ATG4B-209ENST00000425239 SUSD2Q9UGT4 822 aa15.7■□□□□ 0.1
ATG4B-209ENST00000425239 RASAL2Q9UJF2 1139 aa15.7■□□□□ 0.1
ATG4B-209ENST00000425239 STOML2Q9UJZ1 356 aa15.7■□□□□ 0.1
ATG4B-209ENST00000425239 KNL1Q8NG31 2342 aa15.69■□□□□ 0.1
ATG4B-209ENST00000425239 A0A1B0GTW7 788 aa15.69■□□□□ 0.1
ATG4B-209ENST00000425239 DKK1O94907 266 aa15.69■□□□□ 0.1
ATG4B-209ENST00000425239 HMBSP08397 361 aa15.69■□□□□ 0.1
ATG4B-209ENST00000425239 FTH1P19P0C7X4 201 aa15.69■□□□□ 0.1
ATG4B-209ENST00000425239 YWHAGP61981 247 aaKnown RBP eCLIP15.69■□□□□ 0.1
ATG4B-209ENST00000425239 NUMA1Q14980 2115 aa15.69■□□□□ 0.1
ATG4B-209ENST00000425239 NAXDQ8IW45 347 aa15.69■□□□□ 0.1
ATG4B-209ENST00000425239 SIPA1Q96FS4 1042 aa15.69■□□□□ 0.1
ATG4B-209ENST00000425239 IMPG2Q9BZV3 1241 aa15.69■□□□□ 0.1
ATG4B-209ENST00000425239 ZDHHC5Q9C0B5 715 aa15.69■□□□□ 0.1
ATG4B-209ENST00000425239 TMEM245Q9H330 911 aa15.69■□□□□ 0.1
ATG4B-209ENST00000425239 RAB20Q9NX57 234 aa15.69■□□□□ 0.1
ATG4B-209ENST00000425239 TOR4AQ9NXH8 423 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms