RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 MIS12Q9H081 205 aa9.03□□□□□ -0.96
MDC1-204ENST00000422266 ST7Q9NRC1 585 aa9.03□□□□□ -0.96
MDC1-204ENST00000422266 SLC12A6Q9UHW9 1150 aa9.03□□□□□ -0.96
MDC1-204ENST00000422266 STOML2Q9UJZ1 356 aa9.03□□□□□ -0.96
MDC1-204ENST00000422266 NUDT5Q9UKK9 219 aa9.03□□□□□ -0.96
MDC1-204ENST00000422266 AGO1Q9UL18 857 aaKnown RBP9.03□□□□□ -0.96
MDC1-204ENST00000422266 ATG2BQ96BY7 2078 aa9.03□□□□□ -0.96
MDC1-204ENST00000422266 TCRBV21S2A2A0A5A6 115 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 YJEFN3A6XGL0 299 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 E7ENQ6 273 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 SGK1O00141 431 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 SLC30A4O14863 429 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 AP5Z1O43299 807 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 THAP12O43422 761 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 SYNCRIPO60506 623 aaKnown RBP9.02□□□□□ -0.97
MDC1-204ENST00000422266 LETM1O95202 739 aaPredicted RBP9.02□□□□□ -0.97
MDC1-204ENST00000422266 CAVIN2O95810 425 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 GLI1P08151 1106 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 HMBSP08397 361 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 SLC2A3P11169 496 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 NCAM1P13591 858 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 TGM1P22735 817 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 BRD2P25440 801 aaKnown RBP9.02□□□□□ -0.97
MDC1-204ENST00000422266 MPLP40238 635 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 P2RY2P41231 377 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 GPD2P43304 727 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 RPL34P49207 117 aaKnown RBP9.02□□□□□ -0.97
MDC1-204ENST00000422266 FYB2Q5VWT5 728 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 PMS2CLQ68D20 193 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 IL31Q6EBC2 164 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 PMF1Q6P1K2 205 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 ANKRD20A12PQ8NF67 263 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 OLIG1Q8TAK6 271 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 CEP76Q8TAP6 659 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 ZNF606Q8WXB4 792 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 TFAP2BQ92481 460 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 FAM149B1Q96BN6 582 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 TMA16Q96EY4 203 aaKnown RBP9.02□□□□□ -0.97
MDC1-204ENST00000422266 GABRG3Q99928 467 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 DUSP15Q9H1R2 295 aaPredicted RBP9.02□□□□□ -0.97
MDC1-204ENST00000422266 ARRDC1-AS1Q9H2J1 176 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 FBRSQ9HAH7 460 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 POPDC2Q9HBU9 364 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 PLA2G4CQ9UP65 541 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 TLR6Q9Y2C9 796 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 DAAM1Q9Y4D1 1078 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 SPAG17Q6Q759 2223 aa9.02□□□□□ -0.97
MDC1-204ENST00000422266 BCLAF3A2AJT9 711 aaKnown RBP9.01□□□□□ -0.97
MDC1-204ENST00000422266 RNF225M0QZC1 329 aaPredicted RBP9.01□□□□□ -0.97
MDC1-204ENST00000422266 TULP2O00295 520 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 PES1O00541 588 aaKnown RBP9.01□□□□□ -0.97
MDC1-204ENST00000422266 KHNYNO15037 678 aaKnown RBP9.01□□□□□ -0.97
MDC1-204ENST00000422266 ADAM23O75077 832 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 APOEP02649 317 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 KLKB1P03952 638 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 ATP5BP06576 529 aaKnown RBP9.01□□□□□ -0.97
MDC1-204ENST00000422266 CISD3P0C7P0 127 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 EEF1GP26641 437 aaKnown RBP9.01□□□□□ -0.97
MDC1-204ENST00000422266 KRT9P35527 623 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 USP8P40818 1118 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 RGS7P49802 495 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 TBX4P57082 545 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 CREB5Q02930 508 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 LMAN2Q12907 356 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 VWA3BQ502W6 1294 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 EFHC1Q5JVL4 640 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 PLA2G2CQ5R387 149 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 ACBD5Q5T8D3 534 aaPredicted RBP9.01□□□□□ -0.97
MDC1-204ENST00000422266 EMC10Q5UCC4 262 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 TMEM92Q6UXU6 159 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 BHLHA9Q7RTU4 235 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 CYP2U1Q7Z449 544 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 TMEM110Q86TL2 294 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 METTL3Q86U44 580 aaKnown RBP9.01□□□□□ -0.97
MDC1-204ENST00000422266 ZDHHC17Q8IUH5 632 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 ARHGEF19Q8IW93 802 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 MSANTD4Q8NCY6 345 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 IPO4Q8TEX9 1081 aaKnown RBP9.01□□□□□ -0.97
MDC1-204ENST00000422266 HMGB4Q8WW32 186 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 SHC3Q92529 594 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 EDEM1Q92611 657 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 FOXJ1Q92949 421 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 KAT5Q92993 513 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 BHMTQ93088 406 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 WBP2Q969T9 261 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 KREMEN1Q96MU8 473 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 PPP1R9BQ96SB3 815 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 TUBGCP2Q9BSJ2 902 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 TPSD1Q9BZJ3 242 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 LHX5Q9H2C1 402 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 NDST4Q9H3R1 872 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 PARD6AQ9NPB6 346 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 RRN3Q9NYV6 651 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 PLK2Q9NYY3 685 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 PCDHGC3Q9UN70 934 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 MYOFQ9NZM1 2061 aa9.01□□□□□ -0.97
MDC1-204ENST00000422266 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9□□□□□ -0.97
MDC1-204ENST00000422266 NDUFS2O75306 463 aa9□□□□□ -0.97
MDC1-204ENST00000422266 MOCS3O95396 460 aa9□□□□□ -0.97
MDC1-204ENST00000422266 IGLV3-27P01718 113 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms