RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 BTBD7Q9P203 1132 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 HERC5Q9UII4 1024 aaKnown RBP17.17■□□□□ 0.34
PKP4-204ENST00000421462 CROCCQ5TZA2 2017 aa17.17■□□□□ 0.34
PKP4-204ENST00000421462 RBBP6Q7Z6E9 1792 aaKnown RBP17.16■□□□□ 0.34
PKP4-204ENST00000421462 STX16-NPEPL1H3BU86 382 aa17.16■□□□□ 0.34
PKP4-204ENST00000421462 TPP1O14773 563 aa17.16■□□□□ 0.34
PKP4-204ENST00000421462 AMHP03971 560 aa17.16■□□□□ 0.34
PKP4-204ENST00000421462 COX4I1P13073 169 aa17.16■□□□□ 0.34
PKP4-204ENST00000421462 ARRB2P32121 409 aa17.16■□□□□ 0.34
PKP4-204ENST00000421462 FLOT2Q14254 428 aa17.16■□□□□ 0.34
PKP4-204ENST00000421462 HSP90AA5PQ58FG0 334 aa17.16■□□□□ 0.34
PKP4-204ENST00000421462 DEPTORQ8TB45 409 aa17.16■□□□□ 0.34
PKP4-204ENST00000421462 JADE3Q92613 823 aa17.16■□□□□ 0.34
PKP4-204ENST00000421462 MARK4Q96L34 752 aa17.16■□□□□ 0.34
PKP4-204ENST00000421462 C8orf37Q96NL8 207 aa17.16■□□□□ 0.34
PKP4-204ENST00000421462 PLAC1Q9HBJ0 212 aa17.16■□□□□ 0.34
PKP4-204ENST00000421462 CTDP1Q9Y5B0 961 aaPredicted RBP17.16■□□□□ 0.34
PKP4-204ENST00000421462 PCDHA10Q9Y5I2 948 aa17.16■□□□□ 0.34
PKP4-204ENST00000421462 UBIAD1Q9Y5Z9 338 aa17.16■□□□□ 0.34
PKP4-204ENST00000421462 SLC15A5A6NIM6 579 aa17.16■□□□□ 0.34
PKP4-204ENST00000421462 ZBTB14O43829 449 aa17.16■□□□□ 0.34
PKP4-204ENST00000421462 SETSIPP0DME0 302 aa17.16■□□□□ 0.34
PKP4-204ENST00000421462 RBM12BQ8IXT5 1001 aaKnown RBP17.16■□□□□ 0.34
PKP4-204ENST00000421462 SAMD3Q8N6K7 520 aa17.16■□□□□ 0.34
PKP4-204ENST00000421462 SYTL5Q8TDW5 730 aaPredicted RBP17.16■□□□□ 0.34
PKP4-204ENST00000421462 LENG8Q96PV6 779 aaPredicted RBP17.16■□□□□ 0.34
PKP4-204ENST00000421462 ARHGAP26Q9UNA1 814 aa17.16■□□□□ 0.34
PKP4-204ENST00000421462 GREB1LQ9C091 1923 aaPredicted RBP17.16■□□□□ 0.34
PKP4-204ENST00000421462 TCRBV5S1A1TA0A578 114 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 SPDYE2BA6NHP3 402 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 TRMUO75648 421 aaKnown RBP17.15■□□□□ 0.34
PKP4-204ENST00000421462 SPDYE6P0CI01 402 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 FGF3P11487 239 aaPredicted RBP17.15■□□□□ 0.34
PKP4-204ENST00000421462 STT3AP46977 705 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 SESN2P58004 480 aaPredicted RBP17.15■□□□□ 0.34
PKP4-204ENST00000421462 CDKL1Q00532 357 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 DCTN2Q13561 401 aaKnown RBP17.15■□□□□ 0.34
PKP4-204ENST00000421462 SPDYE2Q495Y8 402 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 RARS2Q5T160 578 aaKnown RBP17.15■□□□□ 0.34
PKP4-204ENST00000421462 FAM102AQ5T9C2 384 aaPredicted RBP17.15■□□□□ 0.34
PKP4-204ENST00000421462 PGM2L1Q6PCE3 622 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 THNSL1Q8IYQ7 743 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 TMEM174Q8WUU8 243 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 WDR55Q9H6Y2 383 aaPredicted RBP17.15■□□□□ 0.34
PKP4-204ENST00000421462 ANKEF1Q9NU02 776 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 CSPG5O95196 566 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 IL1BP01584 269 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 HMGCRP04035 888 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 CRHR1P34998 444 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 KCTD21Q4G0X4 260 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 MBLAC2Q68D91 279 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 KBTBD6Q86V97 674 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 UBA3Q8TBC4 463 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 GAB3Q8WWW8 586 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 PEBP4Q96S96 227 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 KLC2Q9H0B6 622 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 CAAP1Q9H8G2 361 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 NGRNQ9NPE2 291 aaKnown RBP17.15■□□□□ 0.34
PKP4-204ENST00000421462 ADCY6O43306 1168 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 CSDE1O75534 798 aaKnown RBP17.15■□□□□ 0.34
PKP4-204ENST00000421462 TFPTP0C1Z6 253 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 XRCC1P18887 633 aaPredicted RBP17.15■□□□□ 0.34
PKP4-204ENST00000421462 PRKCEQ02156 737 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 PGM5Q15124 567 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 SLC27A3Q5K4L6 730 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 CCT7Q99832 543 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 SIKE1Q9BRV8 207 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 DCUN1D5Q9BTE7 237 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 CEP41Q9BYV8 373 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 ZNF510Q9Y2H8 683 aa17.15■□□□□ 0.34
PKP4-204ENST00000421462 STRNO43815 780 aa17.14■□□□□ 0.33
PKP4-204ENST00000421462 SPAG6O75602 509 aa17.14■□□□□ 0.33
PKP4-204ENST00000421462 C1QAP02745 245 aa17.14■□□□□ 0.33
PKP4-204ENST00000421462 EDN1P05305 212 aa17.14■□□□□ 0.33
PKP4-204ENST00000421462 RPL10P27635 214 aaKnown RBP17.14■□□□□ 0.33
PKP4-204ENST00000421462 SERPINB8P50452 374 aa17.14■□□□□ 0.33
PKP4-204ENST00000421462 SLC9B1Q4ZJI4 515 aa17.14■□□□□ 0.33
PKP4-204ENST00000421462 NXNQ6DKJ4 435 aa17.14■□□□□ 0.33
PKP4-204ENST00000421462 SNX32Q86XE0 403 aa17.14■□□□□ 0.33
PKP4-204ENST00000421462 BHLHE22Q8NFJ8 381 aaPredicted RBP17.14■□□□□ 0.33
PKP4-204ENST00000421462 ZNF512Q96ME7 567 aaPredicted RBP17.14■□□□□ 0.33
PKP4-204ENST00000421462 SENP6Q9GZR1 1112 aaPredicted RBP17.14■□□□□ 0.33
PKP4-204ENST00000421462 NRDE2Q9H7Z3 1164 aa17.14■□□□□ 0.33
PKP4-204ENST00000421462 ITGA11Q9UKX5 1188 aa17.14■□□□□ 0.33
PKP4-204ENST00000421462 SSX2IPQ9Y2D8 614 aa17.14■□□□□ 0.33
PKP4-204ENST00000421462 AFG3L2Q9Y4W6 797 aa17.14■□□□□ 0.33
PKP4-204ENST00000421462 UTRNP46939 3433 aa17.14■□□□□ 0.33
PKP4-204ENST00000421462 WDR27A2RRH5 827 aa17.14■□□□□ 0.33
PKP4-204ENST00000421462 POLRMTO00411 1230 aaKnown RBP17.14■□□□□ 0.33
PKP4-204ENST00000421462 LYPLA2O95372 231 aa17.14■□□□□ 0.33
PKP4-204ENST00000421462 TNFAIP8O95379 198 aa17.14■□□□□ 0.33
PKP4-204ENST00000421462 FAM58BPP0C7Q3 252 aa17.14■□□□□ 0.33
PKP4-204ENST00000421462 JAK3P52333 1124 aa17.14■□□□□ 0.33
PKP4-204ENST00000421462 GTF2A2P52657 109 aa17.14■□□□□ 0.33
PKP4-204ENST00000421462 THOP1P52888 689 aa17.14■□□□□ 0.33
PKP4-204ENST00000421462 BCAR1P56945 870 aa17.14■□□□□ 0.33
PKP4-204ENST00000421462 KLHL35Q6PF15 583 aa17.14■□□□□ 0.33
PKP4-204ENST00000421462 CMC1Q7Z7K0 106 aa17.14■□□□□ 0.33
PKP4-204ENST00000421462 CCDC60Q8IWA6 550 aaPredicted RBP17.14■□□□□ 0.33
PKP4-204ENST00000421462 KCNK16Q96T55 309 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms