RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 DGKHQ86XP1 1220 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 ZNF619Q8N2I2 560 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 ANKRD44Q8N8A2 993 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 OR8K3Q8NH51 312 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 TTC8Q8TAM2 541 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 UTP15Q8TED0 518 aaKnown RBP4.28□□□□□ -1.72
PTPN22-202ENST00000420377 ZDHHC1Q8WTX9 485 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 GAB3Q8WWW8 586 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 BADQ92934 168 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 IQCDQ96DY2 449 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 TMEM68Q96MH6 324 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 C12orf49Q9H741 205 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 ZNF395Q9H8N7 513 aaPredicted RBP4.28□□□□□ -1.72
PTPN22-202ENST00000420377 ANKZF1Q9H8Y5 726 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 MRPL40Q9NQ50 206 aaKnown RBP4.28□□□□□ -1.72
PTPN22-202ENST00000420377 GLRX2Q9NS18 164 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 RASSF1Q9NS23 344 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 INTS7Q9NVH2 962 aaKnown RBP4.28□□□□□ -1.72
PTPN22-202ENST00000420377 GIN1Q9NXP7 522 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 FETUBQ9UGM5 382 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 ADGRE2Q9UHX3 823 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 LRCH1Q9Y2L9 728 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 C15orf38-AP3S2A0A0A6YYH1 394 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 SMIM31A0A1B0GVY4 71 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 ARHGEF37A1IGU5 675 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 ACOD1A6NK06 481 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 PLA2G6O60733 806 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 SOCS5O75159 536 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 SNAPINO95295 136 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 CNOT4O95628 575 aaKnown RBP4.28□□□□□ -1.72
PTPN22-202ENST00000420377 ADH1CP00326 375 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 ALBP02768 609 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 S100A9P06702 114 aaKnown RBP4.28□□□□□ -1.72
PTPN22-202ENST00000420377 RPS17P08708 135 aaKnown RBP4.28□□□□□ -1.72
PTPN22-202ENST00000420377 GNAI3P08754 354 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 NPR3P17342 541 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 GARTP22102 1010 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 ACSL1P33121 698 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 TXKP42681 527 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 ZAP70P43403 619 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 PHKA1P46020 1223 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 RPIAP49247 311 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 RENBPP51606 427 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 HNRNPFP52597 415 aaKnown RBP4.28□□□□□ -1.72
PTPN22-202ENST00000420377 STAT2P52630 851 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 ARFIP1P53367 373 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 EPHB1P54762 984 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 RAB14P61106 215 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 RPS3AP61247 264 aaKnown RBP4.28□□□□□ -1.72
PTPN22-202ENST00000420377 HERVK_113P62684 666 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 UBE2IP63279 158 aaKnown RBP4.28□□□□□ -1.72
PTPN22-202ENST00000420377 RELBQ01201 579 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 LGALS3BPQ08380 585 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 CDC16Q13042 620 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 STK4Q13043 487 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 COTL1Q14019 142 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 MXD4Q14582 209 aaPredicted RBP4.28□□□□□ -1.72
PTPN22-202ENST00000420377 KPNB1Q14974 876 aaKnown RBP4.28□□□□□ -1.72
PTPN22-202ENST00000420377 ACAP2Q15057 778 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 PPA1Q15181 289 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 CWF19L2Q2TBE0 894 aaKnown RBP4.28□□□□□ -1.72
PTPN22-202ENST00000420377 C5orf22Q49AR2 442 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 CEP55Q53EZ4 464 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 FAM209BQ5JX69 171 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 PDPK2PQ6A1A2 396 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 ARHGAP11AQ6P4F7 1023 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 PGM2L1Q6PCE3 622 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 TRIM65Q6PJ69 517 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 TRIM67Q6ZTA4 783 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 TOGARAM2Q6ZUX3 1019 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 TTC6Q86TZ1 520 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 SLC22A9Q8IVM8 553 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 TRIM22Q8IYM9 498 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 PM20D2Q8IYS1 436 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 LINC00518Q8N0U6 118 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 GJD3Q8N144 294 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 ARHGAP24Q8N264 748 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 PABPC5Q96DU9 382 aaKnown RBP4.28□□□□□ -1.72
PTPN22-202ENST00000420377 EIF2AK1Q9BQI3 630 aaKnown RBP4.28□□□□□ -1.72
PTPN22-202ENST00000420377 PHF20Q9BVI0 1012 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 TFB2MQ9H5Q4 396 aaKnown RBP4.28□□□□□ -1.72
PTPN22-202ENST00000420377 TRPV4Q9HBA0 871 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 ALG13Q9NP73 1137 aaKnown RBP4.28□□□□□ -1.72
PTPN22-202ENST00000420377 SEC31BQ9NQW1 1179 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 BLOC1S4Q9NUP1 217 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 MCM9Q9NXL9 1143 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 STK17AQ9UEE5 414 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 FBXO40Q9UH90 709 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 DACH1Q9UI36 760 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 ERVK-11Q9UQG0 969 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 MAP4K5Q9Y4K4 846 aa4.28□□□□□ -1.72
PTPN22-202ENST00000420377 FAM221BA6H8Z2 402 aa4.27□□□□□ -1.73
PTPN22-202ENST00000420377 OR6C74A6NCV1 312 aa4.27□□□□□ -1.73
PTPN22-202ENST00000420377 SMCO2A6NFE2 343 aa4.27□□□□□ -1.73
PTPN22-202ENST00000420377 CAPN8A6NHC0 703 aa4.27□□□□□ -1.73
PTPN22-202ENST00000420377 CCDC69A6NI79 296 aa4.27□□□□□ -1.73
PTPN22-202ENST00000420377 C5orf67F2Z3F1 127 aa4.27□□□□□ -1.73
PTPN22-202ENST00000420377 H3BUI4 141 aa4.27□□□□□ -1.73
PTPN22-202ENST00000420377 L7N2F9 121 aa4.27□□□□□ -1.73
PTPN22-202ENST00000420377 MEN1O00255 615 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms