RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 ASTE1Q2TB18 679 aaPredicted RBP18.25■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 SLC25A52Q3SY17 297 aa18.25■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 ZNF852Q6ZMS4 543 aa18.25■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 BNIPLQ7Z465 357 aa18.25■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 TTC16Q8NEE8 873 aa18.25■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 FCRL2Q96LA5 508 aaPredicted RBP18.25■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 SPHK2Q9NRA0 654 aa18.25■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.25■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 MARK1Q9P0L2 795 aa18.25■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 MRPS17Q9Y2R5 130 aaKnown RBP18.25■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 KANSL1LA0AUZ9 987 aa18.24■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 SPECC1L-ADORA2AF8WAN1 911 aa18.24■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 GOLGA8SH3BPF8 625 aa18.24■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 MSI1O43347 362 aaKnown RBP18.24■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 ENDOD1O94919 500 aa18.24■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 ADH1CP00326 375 aa18.24■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 FTLP02792 175 aaPredicted RBP18.24■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 CYP17A1P05093 508 aa18.24■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 HMBSP08397 361 aa18.24■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 MYBL1P10243 752 aa18.24■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 SLC2A3P11169 496 aa18.24■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 KRT3P12035 628 aa18.24■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 GJA4P35212 333 aa18.24■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 FLT3P36888 993 aa18.24■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 CLCN5P51795 746 aa18.24■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 PPP1R15BQ5SWA1 713 aa18.24■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 PLEKHA7Q6IQ23 1121 aa18.24■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 TPRG1Q6ZUI0 275 aa18.24■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 TC2NQ8N9U0 490 aa18.24■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 CHFRQ96EP1 664 aa18.24■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 TRIM11Q96F44 468 aa18.24■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 NENFQ9UMX5 172 aa18.24■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 F5P12259 2224 aa18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 A0A087X0T9 212 aa18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 C2CD4BA6NLJ0 364 aa18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 GFRA2O00451 464 aa18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 TRDMT1O14717 391 aaKnown RBP18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 HOXC11O43248 304 aaPredicted RBP18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 FAM228BP0C875 321 aa18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 EIF4A3P38919 411 aaKnown RBP18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 EIF2DP41214 584 aaKnown RBP18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 RNASE9P60153 205 aaKnown RBP18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 PITX1P78337 314 aaPredicted RBP18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 GAD2Q05329 585 aa18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 PPP2R5DQ14738 602 aa18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 GAB4Q2WGN9 574 aa18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 TMEM31Q5JXX7 168 aa18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 LY6G5CQ5SRR4 150 aa18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 ADGRF1Q5T601 910 aa18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 ALKBH5Q6P6C2 394 aaKnown RBP18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 DENND1CQ8IV53 801 aa18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 ZNF687Q8N1G0 1237 aa18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 FAM3CQ92520 227 aa18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 EXOC4Q96A65 974 aa18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 PBXIP1Q96AQ6 731 aa18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 SELENOOQ9BVL4 669 aa18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 TBC1D17Q9HA65 648 aa18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 METTL5Q9NRN9 209 aaKnown RBP18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 PARVAQ9NVD7 372 aa18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 DDIT4Q9NX09 232 aa18.23■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 TICRRQ7Z2Z1 1910 aa18.22■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 KCNU1A8MYU2 1149 aa18.22■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 M0QYT0 321 aa18.22■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 ACSL4O60488 711 aa18.22■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 ADCY5O95622 1261 aa18.22■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 RRM1P23921 792 aa18.22■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 CCR1P32246 355 aa18.22■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 PTPN9P43378 593 aa18.22■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 SLC11A2P49281 568 aa18.22■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 SLC18A3Q16572 532 aa18.22■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 OTUD1Q5VV17 481 aaPredicted RBP18.22■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 TRNP1Q6NT89 227 aa18.22■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 DNAJC24Q6P3W2 148 aa18.22■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 TMEM25Q86YD3 366 aa18.22■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 FBXL6Q8N531 539 aa18.22■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 ADAM32Q8TC27 787 aa18.22■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 CENPIQ92674 756 aaPredicted RBP18.22■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 MFSD1Q9H3U5 465 aa18.22■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 FAM204AQ9H8W3 233 aa18.22■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 LTB4R2Q9NPC1 389 aa18.22■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 IMPACTQ9P2X3 320 aa18.22■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 SLC12A6Q9UHW9 1150 aa18.22■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 TMCO5BA8MYB1 307 aa18.21■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 SCAMP3O14828 347 aaKnown RBP18.21■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 PDGFBP01127 241 aaPredicted RBP18.21■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 APOEP02649 317 aa18.21■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 ADH5P11766 374 aa18.21■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 PDGFRAP16234 1089 aa18.21■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 AOC1P19801 751 aa18.21■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 RFC1P35251 1148 aaPredicted RBP18.21■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 SOX9P48436 509 aa18.21■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 CXCR3P49682 368 aa18.21■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 MAMLD1Q13495 774 aa18.21■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 ZC3H12AQ5D1E8 599 aaKnown RBP18.21■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 BRMS1LQ5PSV4 323 aa18.21■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 ACBD5Q5T8D3 534 aaPredicted RBP18.21■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 CWF19L1Q69YN2 538 aaKnown RBP18.21■□□□□ 0.51
COMMD3-BMI1-201ENST00000417470 TXNDC11Q6PKC3 985 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms