RNA–Protein interactions for RNA: ENST00000417243.5

TRAPPC12-206, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 1,047 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-206ENST00000417243 LRRC38Q5VT99 294 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 NUGGCQ68CJ6 796 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 POTEHQ6S545 545 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 CYP4V2Q6ZWL3 525 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 SND1Q7KZF4 910 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 GET4Q7L5D6 327 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 POLNQ7Z5Q5 900 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 DAAM2Q86T65 1068 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 ADAM32Q8TC27 787 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 ING5Q8WYH8 240 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 CD101Q93033 1021 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 FCRL2Q96LA5 508 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 NACA2Q9H009 215 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 ARHGEF38Q9NXL2 777 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 OBP2AQ9NY56 170 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 SFMBT1Q9UHJ3 866 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 CDH7Q9ULB5 785 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 USTQ9Y2C2 406 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 ALG6Q9Y672 507 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 SLC12A8A0AV02 714 aa13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 KCNU1A8MYU2 1149 aa13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 PSTPIP1O43586 416 aa13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 KIF5CO60282 957 aa13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 PALMO75781 387 aa13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 STC2O76061 302 aa13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 COMTP21964 271 aa13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 MSNP26038 577 aaKnown RBP13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 MIPP30301 263 aa13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 CCR1P32246 355 aa13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 TBX4P57082 545 aa13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 SKIV2LQ15477 1246 aaKnown RBP13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 PUS10Q3MIT2 529 aaKnown RBP13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 RAB6CQ53S08 254 aa13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 ACBD5Q5T8D3 534 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 CC2D1AQ6P1N0 951 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 NT5DC3Q86UY8 548 aa13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 MIB1Q86YT6 1006 aa13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 PSTKQ8IV42 348 aaKnown RBP13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 MAFAQ8NHW3 353 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 ADAMTS19Q8TE59 1207 aa13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 TEKT4Q8WW24 435 aa13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 AZIN2Q96A70 460 aa13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 ASB16Q96NS5 453 aa13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 RAB6CQ9H0N0 254 aa13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 SLITRK6Q9H5Y7 841 aa13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.04□□□□□ -0.324e-7■■■■□ 24.3
TRAPPC12-206ENST00000417243 EPS15L1Q9UBC2 864 aa13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 USP18Q9UMW8 372 aa13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 CPQQ9Y646 472 aa13.04□□□□□ -0.32
TRAPPC12-206ENST00000417243 MIF4GDA9UHW6 222 aaKnown RBP13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 SPOPO43791 374 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 PRPSAP2O60256 369 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 GREM1O60565 184 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 PRAMEF12O95522 483 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 APOEP02649 317 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 CTNNA2P26232 953 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 CTNNA1P35221 906 aaKnown RBP13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 ATXN1P54253 815 aaKnown RBP13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 ZXDBP98169 803 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 NME3Q13232 169 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 SMAD2Q15796 467 aaKnown RBP13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 CLUL1Q15846 466 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 ZNF77Q15935 545 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 HADHQ16836 314 aaKnown RBP13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 ARL13BQ3SXY8 428 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 Q6ZNB5 142 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 NYAP1Q6ZVC0 841 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 OTOP3Q7RTS5 596 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 FAM131BQ86XD5 332 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 CPNE8Q86YQ8 564 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 UNC45BQ8IWX7 931 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 ZSCAN18Q8TBC5 510 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 SMARCD2Q92925 531 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 USP13Q92995 863 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 E2F7Q96AV8 911 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 ZSWIM3Q96MP5 696 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 PEBP4Q96S96 227 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 MYADMQ96S97 322 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 CYP2S1Q96SQ9 504 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 IRX2Q9BZI1 471 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 DCLK3Q9C098 648 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 GOLPH3Q9H4A6 298 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 TDP1Q9NUW8 608 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 STOML2Q9UJZ1 356 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 DOCK4Q8N1I0 1966 aa13.03□□□□□ -0.32
TRAPPC12-206ENST00000417243 E2F8A0AVK6 867 aa13.02□□□□□ -0.33
TRAPPC12-206ENST00000417243 CCDC66A2RUB6 948 aa13.02□□□□□ -0.33
TRAPPC12-206ENST00000417243 TMEM110-MUSTN1A8MSY1 372 aa13.02□□□□□ -0.33
TRAPPC12-206ENST00000417243 LEFTY2O00292 366 aa13.02□□□□□ -0.33
TRAPPC12-206ENST00000417243 KRT7P08729 469 aa13.02□□□□□ -0.33
TRAPPC12-206ENST00000417243 LAMP2P13473 410 aa13.02□□□□□ -0.33
TRAPPC12-206ENST00000417243 TCF4P15884 667 aa13.02□□□□□ -0.33
TRAPPC12-206ENST00000417243 FCARP24071 287 aa13.02□□□□□ -0.33
TRAPPC12-206ENST00000417243 IL1R2P27930 398 aa13.02□□□□□ -0.33
TRAPPC12-206ENST00000417243 TAS2R40P59535 323 aa13.02□□□□□ -0.33
TRAPPC12-206ENST00000417243 NRG1Q02297 640 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC12-206ENST00000417243 BOLA3Q53S33 107 aa13.02□□□□□ -0.33
TRAPPC12-206ENST00000417243 ZC3H12AQ5D1E8 599 aaKnown RBP13.02□□□□□ -0.33
TRAPPC12-206ENST00000417243 DAB2IPQ5VWQ8 1189 aa13.02□□□□□ -0.33
TRAPPC12-206ENST00000417243 HTR3DQ70Z44 454 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms