RNA–Protein interactions for RNA: ENST00000415993.5

HDAC10-203, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 2,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-203ENST00000415993 KCNT2Q6UVM3 1135 aa17.9■□□□□ 0.46
HDAC10-203ENST00000415993 TTC25Q96NG3 672 aa17.9■□□□□ 0.46
HDAC10-203ENST00000415993 CASD1Q96PB1 797 aa17.9■□□□□ 0.46
HDAC10-203ENST00000415993 ZCWPW1Q9H0M4 648 aa17.9■□□□□ 0.46
HDAC10-203ENST00000415993 PRDM16Q9HAZ2 1276 aa17.9■□□□□ 0.46
HDAC10-203ENST00000415993 EURLQ9NYK6 297 aa17.9■□□□□ 0.46
HDAC10-203ENST00000415993 RRN3Q9NYV6 651 aa17.9■□□□□ 0.46
HDAC10-203ENST00000415993 XPO7Q9UIA9 1087 aaKnown RBP17.9■□□□□ 0.46
HDAC10-203ENST00000415993 FAM72CH0Y354 149 aa17.89■□□□□ 0.45
HDAC10-203ENST00000415993 DGKIO75912 1065 aa17.89■□□□□ 0.45
HDAC10-203ENST00000415993 MMP13P45452 471 aa17.89■□□□□ 0.45
HDAC10-203ENST00000415993 FAM72AQ5TYM5 149 aa17.89■□□□□ 0.45
HDAC10-203ENST00000415993 FAM72DQ6L9T8 149 aa17.89■□□□□ 0.45
HDAC10-203ENST00000415993 C4orf50Q6ZRC1 276 aa17.89■□□□□ 0.45
HDAC10-203ENST00000415993 FAM72BQ86X60 149 aa17.89■□□□□ 0.45
HDAC10-203ENST00000415993 SPATA2LQ8IUW3 424 aaPredicted RBP17.89■□□□□ 0.45
HDAC10-203ENST00000415993 CCDC13Q8IYE1 715 aa17.89■□□□□ 0.45
HDAC10-203ENST00000415993 COLEC11Q9BWP8 271 aa17.89■□□□□ 0.45
HDAC10-203ENST00000415993 DDIT4Q9NX09 232 aa17.89■□□□□ 0.45
HDAC10-203ENST00000415993 PAK5Q9P286 719 aa17.89■□□□□ 0.45
HDAC10-203ENST00000415993 ZMYND8Q9ULU4 1186 aaPredicted RBP17.89■□□□□ 0.45
HDAC10-203ENST00000415993 PCDHB7Q9Y5E2 793 aa17.89■□□□□ 0.45
HDAC10-203ENST00000415993 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.89■□□□□ 0.45
HDAC10-203ENST00000415993 GATMP50440 423 aa17.89■□□□□ 0.45
HDAC10-203ENST00000415993 DPYSQ14117 519 aa17.89■□□□□ 0.45
HDAC10-203ENST00000415993 STAT4Q14765 748 aa17.89■□□□□ 0.45
HDAC10-203ENST00000415993 EFHC2Q5JST6 749 aa17.89■□□□□ 0.45
HDAC10-203ENST00000415993 LEKR1Q6ZMV7 388 aa17.89■□□□□ 0.45
HDAC10-203ENST00000415993 CDKL3Q8IVW4 592 aaPredicted RBP17.89■□□□□ 0.45
HDAC10-203ENST00000415993 CCDC33Q8N5R6 958 aa17.89■□□□□ 0.45
HDAC10-203ENST00000415993 QKIQ96PU8 341 aaKnown RBP eCLIP17.89■□□□□ 0.45
HDAC10-203ENST00000415993 FAM193BQ96PV7 902 aaPredicted RBP17.89■□□□□ 0.45
HDAC10-203ENST00000415993 CTNNAL1Q9UBT7 734 aa17.89■□□□□ 0.45
HDAC10-203ENST00000415993 TET1Q8NFU7 2136 aa17.88■□□□□ 0.45
HDAC10-203ENST00000415993 H3BRJ5 948 aa17.88■□□□□ 0.45
HDAC10-203ENST00000415993 LSP1P33241 339 aa17.88■□□□□ 0.45
HDAC10-203ENST00000415993 CXCR3P49682 368 aa17.88■□□□□ 0.45
HDAC10-203ENST00000415993 ARL4CP56559 192 aa17.88■□□□□ 0.45
HDAC10-203ENST00000415993 EIF4EBP2Q13542 120 aaPredicted RBP17.88■□□□□ 0.45
HDAC10-203ENST00000415993 SLC39A12Q504Y0 691 aa17.88■□□□□ 0.45
HDAC10-203ENST00000415993 RFX8Q6ZV50 586 aa17.88■□□□□ 0.45
HDAC10-203ENST00000415993 BEND5Q7L4P6 421 aa17.88■□□□□ 0.45
HDAC10-203ENST00000415993 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.88■□□□□ 0.45
HDAC10-203ENST00000415993 A0A087WUV0 522 aaPredicted RBP17.88■□□□□ 0.45
HDAC10-203ENST00000415993 CHADO15335 359 aa17.88■□□□□ 0.45
HDAC10-203ENST00000415993 TRAPPC3O43617 180 aa17.88■□□□□ 0.45
HDAC10-203ENST00000415993 CREB3O43889 395 aa17.88■□□□□ 0.45
HDAC10-203ENST00000415993 MFSD11O43934 449 aa17.88■□□□□ 0.45
HDAC10-203ENST00000415993 PQBP1O60828 265 aaKnown RBP17.88■□□□□ 0.45
HDAC10-203ENST00000415993 GCATO75600 419 aa17.88■□□□□ 0.45
HDAC10-203ENST00000415993 F9P00740 461 aa17.88■□□□□ 0.45
HDAC10-203ENST00000415993 MAGEA6P43360 314 aa17.88■□□□□ 0.45
HDAC10-203ENST00000415993 SLC5A3P53794 718 aa17.88■□□□□ 0.45
HDAC10-203ENST00000415993 GPX6P59796 221 aa17.88■□□□□ 0.45
HDAC10-203ENST00000415993 PPARDQ03181 441 aa17.88■□□□□ 0.45
HDAC10-203ENST00000415993 CBLBQ13191 982 aa17.88■□□□□ 0.45
HDAC10-203ENST00000415993 EXOC3L1Q86VI1 746 aa17.88■□□□□ 0.45
HDAC10-203ENST00000415993 CCDC110Q8TBZ0 833 aa17.88■□□□□ 0.45
HDAC10-203ENST00000415993 SEPT8Q92599 483 aa17.88■□□□□ 0.45
HDAC10-203ENST00000415993 STMN4Q9H169 189 aaPredicted RBP17.88■□□□□ 0.45
HDAC10-203ENST00000415993 RAB6BQ9NRW1 208 aa17.88■□□□□ 0.45
HDAC10-203ENST00000415993 CLUHO75153 1309 aa17.87■□□□□ 0.45
HDAC10-203ENST00000415993 SYN3O14994 580 aa17.87■□□□□ 0.45
HDAC10-203ENST00000415993 DCLK1O15075 740 aa17.87■□□□□ 0.45
HDAC10-203ENST00000415993 TADA2AO75478 443 aa17.87■□□□□ 0.45
HDAC10-203ENST00000415993 IGLV3-25P01717 112 aa17.87■□□□□ 0.45
HDAC10-203ENST00000415993 GCAP28676 217 aa17.87■□□□□ 0.45
HDAC10-203ENST00000415993 GRIK1P39086 918 aa17.87■□□□□ 0.45
HDAC10-203ENST00000415993 PGFP49763 221 aa17.87■□□□□ 0.45
HDAC10-203ENST00000415993 MRPL58Q14197 206 aaKnown RBP17.87■□□□□ 0.45
HDAC10-203ENST00000415993 VARS2Q5ST30 1063 aaKnown RBP17.87■□□□□ 0.45
HDAC10-203ENST00000415993 ABI1Q8IZP0 508 aa17.87■□□□□ 0.45
HDAC10-203ENST00000415993 APBB2Q92870 758 aa17.87■□□□□ 0.45
HDAC10-203ENST00000415993 LGALS13Q9UHV8 139 aa17.87■□□□□ 0.45
HDAC10-203ENST00000415993 ADAM28Q9UKQ2 775 aa17.87■□□□□ 0.45
HDAC10-203ENST00000415993 PATJQ8NI35 1801 aa17.87■□□□□ 0.45
HDAC10-203ENST00000415993 SF3B1O75533 1304 aaKnown RBP eCLIP17.87■□□□□ 0.456e-8■■■■■ 127.1
HDAC10-203ENST00000415993 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.87■□□□□ 0.45
HDAC10-203ENST00000415993 PAFAH1B3Q15102 231 aaKnown RBP17.87■□□□□ 0.45
HDAC10-203ENST00000415993 ZSCAN26Q16670 478 aa17.87■□□□□ 0.45
HDAC10-203ENST00000415993 TAC4Q86UU9 113 aa17.87■□□□□ 0.45
HDAC10-203ENST00000415993 ANKMY2Q8IV38 441 aa17.87■□□□□ 0.45
HDAC10-203ENST00000415993 CYP4X1Q8N118 509 aa17.87■□□□□ 0.45
HDAC10-203ENST00000415993 MDM1Q8TC05 714 aa17.87■□□□□ 0.45
HDAC10-203ENST00000415993 GPR62Q9BZJ7 368 aa17.87■□□□□ 0.45
HDAC10-203ENST00000415993 CNOT10Q9H9A5 744 aaKnown RBP17.87■□□□□ 0.45
HDAC10-203ENST00000415993 MARCH5Q9NX47 278 aa17.87■□□□□ 0.45
HDAC10-203ENST00000415993 HCSTQ9UBK5 93 aa17.87■□□□□ 0.45
HDAC10-203ENST00000415993 C5orf60A6NFR6 353 aa17.86■□□□□ 0.45
HDAC10-203ENST00000415993 E7EVH7 732 aa17.86■□□□□ 0.45
HDAC10-203ENST00000415993 EEF2KO00418 725 aaKnown RBP17.86■□□□□ 0.45
HDAC10-203ENST00000415993 CDH16O75309 829 aa17.86■□□□□ 0.45
HDAC10-203ENST00000415993 HCAR3P49019 387 aa17.86■□□□□ 0.45
HDAC10-203ENST00000415993 MTM1Q13496 603 aa17.86■□□□□ 0.45
HDAC10-203ENST00000415993 CCDC38Q502W7 563 aa17.86■□□□□ 0.45
HDAC10-203ENST00000415993 FAM43BQ6ZT52 329 aaPredicted RBP17.86■□□□□ 0.45
HDAC10-203ENST00000415993 PDIK1LQ8N165 341 aa17.86■□□□□ 0.45
HDAC10-203ENST00000415993 DQX1Q8TE96 717 aaKnown RBP17.86■□□□□ 0.45
HDAC10-203ENST00000415993 LGMNQ99538 433 aa17.86■□□□□ 0.45
HDAC10-203ENST00000415993 RNF208Q9H0X6 261 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms