RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 LAYNQ6UX15 382 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 SCARA5Q6ZMJ2 495 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 CCDC73Q6ZRK6 1079 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 STXBP4Q6ZWJ1 553 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 CCDC65Q8IXS2 484 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 RDH13Q8NBN7 331 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 SNX19Q92543 992 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 SYAP1Q96A49 352 aaPredicted RBP10.06□□□□□ -0.8
RFFL-203ENST00000413582 CCDC127Q96BQ5 260 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 NXPE2Q96DL1 559 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 TNIP3Q96KP6 325 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 NUP58Q9BVL2 599 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 PRORYQ9H606 182 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 C6orf106Q9H6K1 298 aaPredicted RBP10.06□□□□□ -0.8
RFFL-203ENST00000413582 NMUR1Q9HB89 426 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 HMGXB4Q9UGU5 601 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 SCML2Q9UQR0 700 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 SRPRBQ9Y5M8 271 aaKnown RBP10.06□□□□□ -0.8
RFFL-203ENST00000413582 PLXNA2O75051 1894 aa10.06□□□□□ -0.8
RFFL-203ENST00000413582 H0Y8X5 98 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 PLK4O00444 970 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 PAPSS1O43252 624 aaPredicted RBP10.05□□□□□ -0.8
RFFL-203ENST00000413582 TGFB1I1O43294 461 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 TLX3O43711 291 aaPredicted RBP10.05□□□□□ -0.8
RFFL-203ENST00000413582 SYNCRIPO60506 623 aaKnown RBP10.05□□□□□ -0.8
RFFL-203ENST00000413582 KLKB1P03952 638 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 ACADMP11310 421 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 HLA-EP13747 358 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 GRIA4P48058 902 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 CYP2J2P51589 502 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 MAP3K7CLP57077 242 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 ORC1Q13415 861 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 SUZ12Q15022 739 aaKnown RBP10.05□□□□□ -0.8
RFFL-203ENST00000413582 FAM173BQ6P4H8 233 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 EPM2AIP1Q7L775 607 aaPredicted RBP10.05□□□□□ -0.8
RFFL-203ENST00000413582 ANKS1BQ7Z6G8 1248 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 ACOT1Q86TX2 421 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 FAM124AQ86V42 546 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 TMPRSS12Q86WS5 348 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 SLC2A14Q8TDB8 520 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 UCMAQ8WVF2 138 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 SORCS1Q8WY21 1168 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 IGSF8Q969P0 613 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 ELMO3Q96BJ8 720 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 PIWIL1Q96J94 861 aaKnown RBP10.05□□□□□ -0.8
RFFL-203ENST00000413582 GBP4Q96PP9 640 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 TM9SF3Q9HD45 589 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 OSGEPQ9NPF4 335 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 FAM49BQ9NUQ9 324 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.05□□□□□ -0.8
RFFL-203ENST00000413582 NUDT5Q9UKK9 219 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 ANKRD6Q9Y2G4 727 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.05□□□□□ -0.8
RFFL-203ENST00000413582 ATMQ13315 3056 aa10.05□□□□□ -0.8
RFFL-203ENST00000413582 A0A1W2PQH9 124 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 HHLA1C9JL84 531 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 C7P10643 843 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 RARGP13631 454 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 ACSL1P33121 698 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 EIF2S3P41091 472 aaKnown RBP10.04□□□□□ -0.8
RFFL-203ENST00000413582 CTSKP43235 329 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 PLA2G4AP47712 749 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 CLDN6P56747 220 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 IL9RQ01113 521 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 EIF4HQ15056 248 aaKnown RBP10.04□□□□□ -0.8
RFFL-203ENST00000413582 TEAD4Q15561 434 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 ZNF667Q5HYK9 610 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 KCNT1Q5JUK3 1230 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 C10orf120Q5SQS8 335 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 TMEM215Q68D42 235 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 SERPINA13PQ6UXR4 307 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 CLEC20AQ6ZU45 233 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 ZNF843Q8N446 348 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 XXYLT1Q8NBI6 393 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 LSM14AQ8ND56 463 aaKnown RBP10.04□□□□□ -0.8
RFFL-203ENST00000413582 ENGASEQ8NFI3 743 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 OR2T3Q8NH03 318 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 PLEKHO2Q8TD55 490 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 ORAI3Q9BRQ5 295 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 LHX5Q9H2C1 402 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 ELOVL2Q9NXB9 296 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 FTSJ1Q9UET6 329 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 DNMT3LQ9UJW3 386 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 CLEC4EQ9ULY5 219 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 RAI2Q9Y5P3 530 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 UBE4BO95155 1302 aa10.04□□□□□ -0.8
RFFL-203ENST00000413582 HECTD1Q9ULT8 2610 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 KCNK3O14649 394 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 CLIC2O15247 247 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 PHACTR2O75167 634 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 VNN1O95497 513 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 SEMA4FO95754 770 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 EPHX1P07099 455 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 FAM200BP0CF97 657 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 PTMSP20962 102 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 ADORA2BP29275 332 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 CASP4P49662 377 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 NDST1P52848 882 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 BIRC3Q13489 604 aa10.03□□□□□ -0.8
RFFL-203ENST00000413582 CAMK2GQ13555 558 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms