RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 PLEKHO1Q53GL0 409 aaPredicted RBP-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 TFDP3Q5H9I0 405 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 SLC35F1Q5T1Q4 408 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 ACBD5Q5T8D3 534 aaPredicted RBP-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 TEDDM1Q5T9Z0 273 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 NUGGCQ68CJ6 796 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 INTS3Q68E01 1043 aaKnown RBP-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 GALNT17Q6IS24 598 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 TMEM71Q6P5X7 295 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 CRTC1Q6UUV9 634 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 KIRREL2Q6UWL6 708 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 SATL1Q86VE3 508 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 RCOR2Q8IZ40 523 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZNF567Q8N184 647 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 CD177Q8N6Q3 437 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 Q8NA96 180 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 PRPF38AQ8NAV1 312 aaKnown RBP-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZNF540Q8NDQ6 660 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 PHC3Q8NDX5 983 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 WDR20Q8TBZ3 569 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 CD101Q93033 1021 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 FAM104AQ969W3 186 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 DHX58Q96C10 678 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZNF799Q96GE5 643 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 AHCYL2Q96HN2 611 aaKnown RBP-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 POM121L2Q96KW2 1035 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 MGME1Q9BQP7 344 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 HSPB9Q9BQS6 159 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 PARLQ9H300 379 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 ASB8Q9H765 288 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 FZD3Q9NPG1 666 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 MKKSQ9NPJ1 570 aaPredicted RBP-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 LANCL2Q9NS86 450 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 LRFN1Q9P244 771 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 FAM8A1Q9UBU6 413 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 RGS17Q9UGC6 210 aaPredicted RBP-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 RAB23Q9ULC3 237 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZMIZ1Q9ULJ6 1067 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 RAD54BQ9Y620 910 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 MYO10Q9HD67 2058 aa-1.27□□□□□ -2.61
RNU4-88P-201ENST00000411220 PKD1L1Q8TDX9 2849 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 ALPK3Q96L96 1907 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 COL4A2P08572 1712 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 LTBP4Q8N2S1 1624 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 OR6C75A6NL08 312 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 MEIS3P2A8K0S8 358 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 C3orf84H3BNL1 204 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 MAGEB2O15479 319 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 ITGA10O75578 1167 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 RASGRP1O95267 797 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 PNPP00491 289 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 MMEP08473 750 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 IGFBP1P08833 259 aaPredicted RBP-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 TFPIP10646 304 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 VDRP11473 427 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 DAOP14920 347 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 ATP2B1P20020 1258 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 POU3F2P20265 443 aaPredicted RBP-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 ATP2B4P23634 1241 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 DGKAP23743 735 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 UQCRFS1P47985 274 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 CPA2P48052 419 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZNF135P52742 658 aaPredicted RBP-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 RPS7P62081 194 aaKnown RBP-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 ILF2Q12905 390 aaKnown RBP-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 CAMK2GQ13555 558 aaPredicted RBP-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 DHX34Q14147 1143 aaKnown RBP-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 KRT24Q2M2I5 525 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 SGSM1Q2NKQ1 1148 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZNF658BQ4V348 819 aaPredicted RBP-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZNF658Q5TYW1 1059 aaPredicted RBP-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 HMBOX1Q6NT76 420 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZNF530Q6P9A1 599 aaPredicted RBP-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 FBXO46Q6PJ61 603 aaPredicted RBP-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 USP49Q70CQ1 688 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 SLC26A9Q7LBE3 791 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 WDR53Q7Z5U6 358 aaPredicted RBP-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 C14orf80Q86SX3 495 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 ENTHD1Q8IYW4 607 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 PRSS35Q8N3Z0 413 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 KIAA0895Q8NCT3 520 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 LSM14AQ8ND56 463 aaKnown RBP-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 C11orf45Q8TAV5 145 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 STK32AQ8WU08 396 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 DEDD2Q8WXF8 326 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 ARNTL2Q8WYA1 636 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 FAM122AQ96E09 287 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 MOCOSQ96EN8 888 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 IL17FQ96PD4 163 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 PPP1R9BQ96SB3 815 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 PHF7Q9BWX1 381 aaPredicted RBP-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 PPP1R12CQ9BZL4 782 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 CHIAQ9BZP6 476 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 PRDM16Q9HAZ2 1276 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 PPANQ9NQ55 473 aaKnown RBP-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 LHX9Q9NQ69 397 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 ANAPC4Q9UJX5 808 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 KLK13Q9UKR3 277 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 IKZF2Q9UKS7 526 aa-1.28□□□□□ -2.61
RNU4-88P-201ENST00000411220 SUGT1Q9Y2Z0 365 aa-1.28□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms