RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 SMOC2Q9H3U7 446 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 HOMER3Q9NSC5 361 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 IL37Q9NZH6 218 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 CWC15Q9P013 229 aaKnown RBP12.93□□□□□ -0.34
CHMP3-204ENST00000409727 FAM72CH0Y354 149 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 APOL1O14791 398 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 IRAK2O43187 625 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 DAPK3O43293 454 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 LILRB3O75022 631 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 MOCS2O96007 188 aaPredicted RBP12.92□□□□□ -0.34
CHMP3-204ENST00000409727 CA3P07451 260 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 MCM3P25205 808 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 DNAJB1P25685 340 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 ARL4AP40617 200 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 CARSP49589 748 aaKnown RBP12.92□□□□□ -0.34
CHMP3-204ENST00000409727 CXCR3P49682 368 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 VPS41P49754 854 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 PLD1Q13393 1074 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 BYSLQ13895 437 aaKnown RBP12.92□□□□□ -0.34
CHMP3-204ENST00000409727 BRD3Q15059 726 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 C10orf120Q5SQS8 335 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 FAM72AQ5TYM5 149 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 FAM72DQ6L9T8 149 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 CCNI2Q6ZMN8 369 aaPredicted RBP12.92□□□□□ -0.34
CHMP3-204ENST00000409727 FAM72BQ86X60 149 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 PQLC3Q8N755 202 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 MICAL1Q8TDZ2 1067 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 LRRN4Q8WUT4 740 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 POF1BQ8WVV4 589 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 CSPG4P5Q96PW8 444 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 ZNF670Q9BS34 389 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 GDF3Q9NR23 364 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.92□□□□□ -0.34
CHMP3-204ENST00000409727 RASAL2Q9UJF2 1139 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 NFU1Q9UMS0 254 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 ZNF148Q9UQR1 794 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 EFR3BQ9Y2G0 817 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 MFHAS1Q9Y4C4 1052 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 HEY1Q9Y5J3 304 aa12.92□□□□□ -0.34
CHMP3-204ENST00000409727 PLXNA3P51805 1871 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 FAM92AA1XBS5 289 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 CCDC151A5D8V7 595 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 FAM187AA6NFU0 413 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 HIDE1A8MVS5 230 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 TGM5O43548 720 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 ERLIN1O75477 346 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 IGLV3-25P01717 112 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 HMBSP08397 361 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 AMPD1P23109 780 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 TFDP2Q14188 446 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 HLTFQ14527 1009 aaKnown RBP eCLIP12.91□□□□□ -0.34
CHMP3-204ENST00000409727 TMCO3Q6UWJ1 677 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 BEND5Q7L4P6 421 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 ZC3H18Q86VM9 953 aaKnown RBP12.91□□□□□ -0.34
CHMP3-204ENST00000409727 NETO2Q8NC67 525 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 P3H4Q92791 437 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 RUNDC3BQ96NL0 473 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 TMEM121Q9BTD3 319 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 SIK2Q9H0K1 926 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 RAB17Q9H0T7 212 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 CCSER2Q9H7U1 834 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 FNIP2Q9P278 1114 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 SSX2IPQ9Y2D8 614 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 SNX24Q9Y343 169 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 APOC4-APOC2K7ER74 178 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 EEF2KO00418 725 aaKnown RBP12.91□□□□□ -0.34
CHMP3-204ENST00000409727 APOC2P02655 101 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 TUBBP07437 444 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 KLRC2P26717 231 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 EIF3EP60228 445 aaKnown RBP12.91□□□□□ -0.34
CHMP3-204ENST00000409727 CREMQ03060 361 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 VEPH1Q14D04 833 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 PLD5Q8N7P1 536 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 ATL2Q8NHH9 583 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 FAM71BQ8TC56 605 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 NTAN1Q96AB6 310 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 ERP44Q9BS26 406 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 RXFP1Q9HBX9 757 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 ARFGAP3Q9NP61 516 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.91□□□□□ -0.34
CHMP3-204ENST00000409727 STK39Q9UEW8 545 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 ASIC3Q9UHC3 531 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 INSL5Q9Y5Q6 135 aa12.91□□□□□ -0.34
CHMP3-204ENST00000409727 ZNF638Q14966 1978 aaKnown RBP12.91□□□□□ -0.34
CHMP3-204ENST00000409727 H3BRJ5 948 aa12.9□□□□□ -0.34
CHMP3-204ENST00000409727 SGK1O00141 431 aa12.9□□□□□ -0.34
CHMP3-204ENST00000409727 GAS8O95995 478 aa12.9□□□□□ -0.34
CHMP3-204ENST00000409727 CSH1P0DML2 217 aa12.9□□□□□ -0.34
CHMP3-204ENST00000409727 CSH2P0DML3 217 aa12.9□□□□□ -0.34
CHMP3-204ENST00000409727 SRGAP2BP0DMP2 458 aa12.9□□□□□ -0.34
CHMP3-204ENST00000409727 HMGA1P17096 107 aaKnown RBP12.9□□□□□ -0.34
CHMP3-204ENST00000409727 CCR1P32246 355 aa12.9□□□□□ -0.34
CHMP3-204ENST00000409727 TNNT3P45378 269 aaPredicted RBP12.9□□□□□ -0.34
CHMP3-204ENST00000409727 VCPP55072 806 aaKnown RBP12.9□□□□□ -0.34
CHMP3-204ENST00000409727 FAM182AQ5T1J6 154 aa12.9□□□□□ -0.34
CHMP3-204ENST00000409727 PSTKQ8IV42 348 aaKnown RBP12.9□□□□□ -0.34
CHMP3-204ENST00000409727 TTC13Q8NBP0 860 aa12.9□□□□□ -0.34
CHMP3-204ENST00000409727 SPPL3Q8TCT6 385 aa12.9□□□□□ -0.34
CHMP3-204ENST00000409727 GRK7Q8WTQ7 553 aa12.9□□□□□ -0.34
CHMP3-204ENST00000409727 ZBTB9Q96C00 473 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms