RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 FAM217AQ8IXS0 508 aa13.53□□□□□ -0.24
PRAME-206ENST00000406503 SLC4A11Q8NBS3 891 aa13.53□□□□□ -0.24
PRAME-206ENST00000406503 DNASE2BQ8WZ79 361 aa13.53□□□□□ -0.24
PRAME-206ENST00000406503 ARID3AQ99856 593 aa13.53□□□□□ -0.24
PRAME-206ENST00000406503 RASAL2Q9UJF2 1139 aa13.53□□□□□ -0.24
PRAME-206ENST00000406503 AGO1Q9UL18 857 aaKnown RBP13.53□□□□□ -0.24
PRAME-206ENST00000406503 FRMD4BQ9Y2L6 1034 aa13.53□□□□□ -0.24
PRAME-206ENST00000406503 SLCO1B1Q9Y6L6 691 aa13.53□□□□□ -0.24
PRAME-206ENST00000406503 TULP2O00295 520 aa13.52□□□□□ -0.25
PRAME-206ENST00000406503 CALUO43852 315 aaPredicted RBP13.52□□□□□ -0.25
PRAME-206ENST00000406503 HMBSP08397 361 aa13.52□□□□□ -0.25
PRAME-206ENST00000406503 CMA1P23946 247 aa13.52□□□□□ -0.25
PRAME-206ENST00000406503 PRKCHP24723 683 aa13.52□□□□□ -0.25
PRAME-206ENST00000406503 CD6P30203 668 aa13.52□□□□□ -0.25
PRAME-206ENST00000406503 PSEN1P49768 467 aa13.52□□□□□ -0.25
PRAME-206ENST00000406503 EFEMP1Q12805 493 aa13.52□□□□□ -0.25
PRAME-206ENST00000406503 DPYDQ12882 1025 aa13.52□□□□□ -0.25
PRAME-206ENST00000406503 ZNF234Q14588 700 aa13.52□□□□□ -0.25
PRAME-206ENST00000406503 PLEKHG6Q3KR16 790 aa13.52□□□□□ -0.25
PRAME-206ENST00000406503 SDE2Q6IQ49 451 aa13.52□□□□□ -0.25
PRAME-206ENST00000406503 INTS8Q75QN2 995 aaKnown RBP13.52□□□□□ -0.25
PRAME-206ENST00000406503 RABEPKQ7Z6M1 372 aa13.52□□□□□ -0.25
PRAME-206ENST00000406503 FAM186BQ8IYM0 893 aa13.52□□□□□ -0.25
PRAME-206ENST00000406503 RGL4Q8IZJ4 473 aa13.52□□□□□ -0.25
PRAME-206ENST00000406503 SORCS1Q8WY21 1168 aa13.52□□□□□ -0.25
PRAME-206ENST00000406503 TOE1Q96GM8 510 aaKnown RBP13.52□□□□□ -0.25
PRAME-206ENST00000406503 MMRN2Q9H8L6 949 aa13.52□□□□□ -0.25
PRAME-206ENST00000406503 ITM2CQ9NQX7 267 aa13.52□□□□□ -0.25
PRAME-206ENST00000406503 CFAP45Q9UL16 551 aa13.52□□□□□ -0.25
PRAME-206ENST00000406503 MAPK8IP1Q9UQF2 711 aa13.52□□□□□ -0.25
PRAME-206ENST00000406503 ZDHHC9Q9Y397 364 aa13.52□□□□□ -0.25
PRAME-206ENST00000406503 CBFA2T3O75081 653 aa13.51□□□□□ -0.25
PRAME-206ENST00000406503 IGLV3-19P01714 112 aa13.51□□□□□ -0.25
PRAME-206ENST00000406503 MYL1P05976 194 aa13.51□□□□□ -0.25
PRAME-206ENST00000406503 SYPP08247 313 aa13.51□□□□□ -0.25
PRAME-206ENST00000406503 NDUFA8P51970 172 aa13.51□□□□□ -0.25
PRAME-206ENST00000406503 RAD23BP54727 409 aa13.51□□□□□ -0.25
PRAME-206ENST00000406503 ENPEPQ07075 957 aa13.51□□□□□ -0.25
PRAME-206ENST00000406503 PIGZQ86VD9 579 aa13.51□□□□□ -0.25
PRAME-206ENST00000406503 NAXDQ8IW45 347 aa13.51□□□□□ -0.25
PRAME-206ENST00000406503 CPXM2Q8N436 756 aa13.51□□□□□ -0.25
PRAME-206ENST00000406503 C1orf216Q8TAB5 229 aa13.51□□□□□ -0.25
PRAME-206ENST00000406503 NDRG1Q92597 394 aaKnown RBP13.51□□□□□ -0.25
PRAME-206ENST00000406503 GPR174Q9BXC1 333 aa13.51□□□□□ -0.25
PRAME-206ENST00000406503 PRDM16Q9HAZ2 1276 aa13.51□□□□□ -0.25
PRAME-206ENST00000406503 IL21RQ9HBE5 538 aa13.51□□□□□ -0.25
PRAME-206ENST00000406503 TMEM8AQ9HCN3 771 aa13.51□□□□□ -0.25
PRAME-206ENST00000406503 H0Y626 953 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 NDUFS2O75306 463 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 KIF20AO95235 890 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 TRIM16O95361 564 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 FTH1P19P0C7X4 201 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 C7P10643 843 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 RALAP11233 206 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 NCAM1P13591 858 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 TPMTP51580 245 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 COG7P83436 770 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 RING1Q06587 406 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 SLC14A1Q13336 389 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 ARHGAP17Q68EM7 881 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 PM20D1Q6GTS8 502 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 CACUL1Q86Y37 369 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 DENND1CQ8IV53 801 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 GUF1Q8N442 669 aaKnown RBP13.5□□□□□ -0.25
PRAME-206ENST00000406503 ZCCHC9Q8N567 271 aaKnown RBP13.5□□□□□ -0.25
PRAME-206ENST00000406503 PNPLA1Q8N8W4 532 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 BAHD1Q8TBE0 780 aaPredicted RBP13.5□□□□□ -0.25
PRAME-206ENST00000406503 FOXJ1Q92949 421 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 TATDN2Q93075 761 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 EEF2KMTQ96G04 330 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 IMPG2Q9BZV3 1241 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 GOLPH3LQ9H4A5 285 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 FAM124BQ9H5Z6 455 aaPredicted RBP13.5□□□□□ -0.25
PRAME-206ENST00000406503 CISHQ9NSE2 258 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 ELOVL2Q9NXB9 296 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 SUSD2Q9UGT4 822 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 USP25Q9UHP3 1055 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 ZNF510Q9Y2H8 683 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 NFE2L3Q9Y4A8 694 aa13.5□□□□□ -0.25
PRAME-206ENST00000406503 ARID1BQ8NFD5 2236 aaPredicted RBP13.49□□□□□ -0.25
PRAME-206ENST00000406503 COL5A1P20908 1838 aaPredicted RBP13.49□□□□□ -0.25
PRAME-206ENST00000406503 HOXD9P28356 352 aaPredicted RBP13.49□□□□□ -0.25
PRAME-206ENST00000406503 CHKAP35790 457 aa13.49□□□□□ -0.25
PRAME-206ENST00000406503 PSMC2P35998 433 aaKnown RBP13.49□□□□□ -0.25
PRAME-206ENST00000406503 ZNF132P52740 706 aa13.49□□□□□ -0.25
PRAME-206ENST00000406503 YWHAGP61981 247 aaKnown RBP eCLIP13.49□□□□□ -0.25
PRAME-206ENST00000406503 ADAM9Q13443 819 aa13.49□□□□□ -0.25
PRAME-206ENST00000406503 TRIP4Q15650 581 aaPredicted RBP13.49□□□□□ -0.25
PRAME-206ENST00000406503 TRIP6Q15654 476 aaKnown RBP13.49□□□□□ -0.25
PRAME-206ENST00000406503 ZNF423Q2M1K9 1284 aa13.49□□□□□ -0.25
PRAME-206ENST00000406503 SYCP2LQ5T4T6 812 aa13.49□□□□□ -0.25
PRAME-206ENST00000406503 DCAF12L1Q5VU92 463 aa13.49□□□□□ -0.25
PRAME-206ENST00000406503 KRT39Q6A163 491 aa13.49□□□□□ -0.25
PRAME-206ENST00000406503 ANKS1BQ7Z6G8 1248 aa13.49□□□□□ -0.25
PRAME-206ENST00000406503 TADA2BQ86TJ2 420 aa13.49□□□□□ -0.25
PRAME-206ENST00000406503 SLCO6A1Q86UG4 719 aa13.49□□□□□ -0.25
PRAME-206ENST00000406503 PROSER1Q86XN7 944 aa13.49□□□□□ -0.25
PRAME-206ENST00000406503 TMPRSS6Q8IU80 811 aa13.49□□□□□ -0.25
PRAME-206ENST00000406503 ZC3H3Q8IXZ2 948 aaKnown RBP13.49□□□□□ -0.25
PRAME-206ENST00000406503 SMYD4Q8IYR2 804 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms