RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ITGA5P08648 1049 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 VEGFAP15692 232 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 TYRP1P17643 537 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 KLRK1P26718 216 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 GKP32189 559 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 TPTEP56180 551 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 SIM1P81133 766 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 DEUP1Q05D60 604 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 MTAPQ13126 283 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 GRM4Q14833 912 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 PLAC9Q5JTB6 97 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 GRHL2Q6ISB3 625 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 TLDC1Q6P9B6 456 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 USP51Q70EK9 711 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 LDLRAD3Q86YD5 345 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 NKAPQ8N5F7 415 aaKnown RBP5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 CCT6BQ92526 530 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 CTHRC1Q96CG8 243 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 RSPRY1Q96DX4 576 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 LENG8Q96PV6 779 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 WDR24Q96S15 920 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 HERPUD2Q9BSE4 406 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 SCAND2PQ9GZW5 306 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 DUSP22Q9NRW4 184 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 NKX1-2Q9UD57 310 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 STEAP1Q9UHE8 339 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 GABRQQ9UN88 632 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 RALGAPBQ86X10 1494 aa5.75□□□□□ -1.49
HMGB3P19-201ENST00000403971 SETD1AO15047 1707 aaKnown RBP5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 POLR1AO95602 1720 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 TMEM191CA6NGB0 347 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 H0YIZ8 118 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 CES2O00748 559 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 FCHO1O14526 889 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 FOXN1O15353 648 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 DHHO43323 396 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 TAF5LO75529 589 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 NTSR2O95665 410 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 GLP2RO95838 553 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 TTLL1O95922 423 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 ANXA6P08133 673 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 CREB1P16220 341 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 NDUFB7P17568 137 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 FPR3P25089 353 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 MCM5P33992 734 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 EIF4A1P60842 406 aaKnown RBP5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 PSG6Q00889 435 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 ACOX1Q15067 660 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 TMEM196Q5HYL7 178 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 SULT6B1Q6IMI4 303 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 JMJD6Q6NYC1 403 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 PARS2Q7L3T8 475 aaKnown RBP5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 GATAD2AQ86YP4 633 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 CERS3Q8IU89 383 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 KATNAL1Q9BW62 490 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 ZCWPW1Q9H0M4 648 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 TOR3AQ9H497 397 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 CA14Q9ULX7 337 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 ARHGAP23Q9P227 1491 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 SETBP1Q9Y6X0 1596 aa5.74□□□□□ -1.49
HMGB3P19-201ENST00000403971 IQGAP1P46940 1657 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 GPRASP1Q5JY77 1395 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 TMEM2Q9UHN6 1383 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 PNMA6EA0A0J9YXQ4 647 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 CA12O43570 354 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 FSHBP01225 129 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 GCP02774 474 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 TMEM225BP0DP42 221 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 CD19P15391 556 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 DRD1P21728 446 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 AKT1P31749 480 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 ACVRL1P37023 503 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 GRK6P43250 576 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 CCT8P50990 548 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 ALDH18A1P54886 795 aaKnown RBP5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 CLCA4Q14CN2 919 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 TIGD6Q17RP2 521 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 L1TD1Q5T7N2 865 aaKnown RBP5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 RAB11FIP4Q86YS3 637 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 GPR150Q8NGU9 434 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 PRR11Q96HE9 360 aaPredicted RBP5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 PRRX2Q99811 253 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 MACROD1Q9BQ69 325 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 KRTAP9-3Q9BYQ3 159 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 MYLK2Q9H1R3 596 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 MLXIPQ9HAP2 919 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 AGO4Q9HCK5 861 aaKnown RBP5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 ALG13Q9NP73 1137 aaKnown RBP5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 IL17RBQ9NRM6 502 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 HELLSQ9NRZ9 838 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 PACSIN3Q9UKS6 424 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 PIK3C2GO75747 1445 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 RIMS2Q9UQ26 1411 aa5.73□□□□□ -1.49
HMGB3P19-201ENST00000403971 CCDC151A5D8V7 595 aa5.72□□□□□ -1.49
HMGB3P19-201ENST00000403971 QSOX1O00391 747 aa5.72□□□□□ -1.49
HMGB3P19-201ENST00000403971 PRKCBP05771 671 aa5.72□□□□□ -1.49
HMGB3P19-201ENST00000403971 PROZP22891 400 aa5.72□□□□□ -1.49
HMGB3P19-201ENST00000403971 CXCR5P32302 372 aa5.72□□□□□ -1.49
HMGB3P19-201ENST00000403971 RARRES1P49788 294 aa5.72□□□□□ -1.49
HMGB3P19-201ENST00000403971 PNLIPRP1P54315 467 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms