RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	PSMC3	P17980	439 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	NAT1	P18440	290 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	KRT2	P35908	639 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	CXCL12	P48061	93 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	STK3	Q13188	491 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	PPP2R5A	Q15172	486 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	LPAL2	Q16609	132 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	FAM187B	Q17R55	369 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	FNDC3B	Q53EP0	1204 aa	Known RBP	7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	CDCA2	Q69YH5	1023 aa	Predicted RBP	7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	SDE2	Q6IQ49	451 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	MAEA	Q7L5Y9	396 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	YAF2	Q8IY57	180 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ZNF461	Q8TAF7	563 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	E2F7	Q96AV8	911 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	AIFM3	Q96NN9	605 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	HSD17B14	Q9BPX1	270 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	PAAF1	Q9BRP4	392 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	CDIP1	Q9H305	208 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	PDZD7	Q9H5P4	517 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	TTC12	Q9H892	705 aa	Predicted RBP	7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	CYP4F11	Q9HBI6	524 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	SLC38A7	Q9NVC3	462 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	CACNG4	Q9UBN1	327 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	NDOR1	Q9UHB4	597 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	PIAS3	Q9Y6X2	628 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	LOXHD1	Q8IVV2	1947 aa		7.36	□□□□□ -1.23
CEACAM1-208	ENST00000403461	OTOGL	Q3ZCN5	2332 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	EPG5	Q9HCE0	2579 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	STK36	Q9NRP7	1315 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ARHGEF37	A1IGU5	675 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ARHGEF35	A5YM69	484 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ZNF263	O14978	683 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	NEMF	O60524	1076 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	CYBB	P04839	570 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	DBH	P09172	617 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	CEBPB	P17676	345 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	FPR2	P25090	351 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	GDI1	P31150	447 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	NAMPT	P43490	491 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	CLCNKB	P51801	687 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	EFNA5	P52803	228 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ARPP19	P56211	112 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	PLD1	Q13393	1074 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	TOB2	Q14106	344 aa	Predicted RBP	7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	TRIM29	Q14134	588 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	NR1I3	Q14994	352 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	NPY5R	Q15761	445 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	CSRP2	Q16527	193 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	SLC5A9	Q2M3M2	681 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	MROH9	Q5TGP6	573 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	TANGO2	Q6ICL3	276 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	SLC8B1	Q6J4K2	584 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	PAQR3	Q6TCH7	311 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	NOSTRIN	Q8IVI9	506 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	SPEM1	Q8N4L4	309 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	NETO2	Q8NC67	525 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ERMN	Q8TAM6	284 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	CSGALNACT1	Q8TDX6	532 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	PIGO	Q8TEQ8	1089 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	SMARCD2	Q92925	531 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	IFT74	Q96LB3	600 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ZNF512	Q96ME7	567 aa	Predicted RBP	7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	CCDC94	Q9BW85	323 aa	Predicted RBP	7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	GPR88	Q9GZN0	384 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	FZD8	Q9H461	694 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	SLITRK6	Q9H5Y7	841 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	LMAN1L	Q9HAT1	526 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	PARD6A	Q9NPB6	346 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	TRPV5	Q9NQA5	729 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ASAH2	Q9NR71	780 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	SEMA4G	Q9NTN9	838 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	PDRG1	Q9NUG6	133 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	SFMBT1	Q9UHJ3	866 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ANGPTL2	Q9UKU9	493 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	MAFF	Q9ULX9	164 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	GDA	Q9Y2T3	454 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	NUB1	Q9Y5A7	615 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	DNAH14	Q0VDD8	3507 aa		7.35	□□□□□ -1.23
CEACAM1-208	ENST00000403461	DENND4A	Q7Z401	1863 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	PHLPP2	Q6ZVD8	1323 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	WDR27	A2RRH5	827 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ACKR2	O00590	384 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	PODXL	O00592	558 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ABLIM1	O14639	778 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	SYN3	O14994	580 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	EPB41L2	O43491	1005 aa	Known RBP	7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	RFPL3	O75679	317 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	NTRK1	P04629	796 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ATF2	P15336	505 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	HSD3B2	P26439	372 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	TKT	P29401	623 aa	Known RBP	7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	KPNA1	P52294	538 aa	Predicted RBP	7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	MLLT6	P55198	1093 aa	Predicted RBP	7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ROR1	Q01973	937 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	AASDH	Q4L235	1098 aa	Predicted RBP	7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	FAM78A	Q5JUQ0	283 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	GLRA4	Q5JXX5	417 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	DGKK	Q5KSL6	1271 aa		7.34	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms