RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 STON1Q9Y6Q2 735 aa12.97□□□□□ -0.33
PRAME-204ENST00000403441 ANKRD11Q6UB99 2663 aaPredicted RBP12.97□□□□□ -0.33
PRAME-204ENST00000403441 HHLA1C9JL84 531 aa12.96□□□□□ -0.33
PRAME-204ENST00000403441 MDM4O15151 490 aa12.96□□□□□ -0.33
PRAME-204ENST00000403441 SH3BP5O60239 455 aa12.96□□□□□ -0.33
PRAME-204ENST00000403441 SYNCRIPO60506 623 aaKnown RBP12.96□□□□□ -0.33
PRAME-204ENST00000403441 STC2O76061 302 aa12.96□□□□□ -0.33
PRAME-204ENST00000403441 CISD3P0C7P0 127 aa12.96□□□□□ -0.33
PRAME-204ENST00000403441 CD44P16070 742 aaKnown RBP12.96□□□□□ -0.33
PRAME-204ENST00000403441 RPL13P26373 211 aaKnown RBP12.96□□□□□ -0.33
PRAME-204ENST00000403441 CHKAP35790 457 aa12.96□□□□□ -0.33
PRAME-204ENST00000403441 PSMC2P35998 433 aaKnown RBP12.96□□□□□ -0.33
PRAME-204ENST00000403441 PPP1R2P41236 205 aa12.96□□□□□ -0.33
PRAME-204ENST00000403441 ZNF132P52740 706 aa12.96□□□□□ -0.33
PRAME-204ENST00000403441 PMS1P54277 932 aaKnown RBP12.96□□□□□ -0.33
PRAME-204ENST00000403441 FAM193AP78312 1265 aa12.96□□□□□ -0.33
PRAME-204ENST00000403441 LRRC63Q05C16 580 aa12.96□□□□□ -0.33
PRAME-204ENST00000403441 TRIP6Q15654 476 aaKnown RBP12.96□□□□□ -0.33
PRAME-204ENST00000403441 FUT11Q495W5 492 aa12.96□□□□□ -0.33
PRAME-204ENST00000403441 CCDC186Q7Z3E2 898 aa12.96□□□□□ -0.33
PRAME-204ENST00000403441 RAB44Q7Z6P3 723 aaPredicted RBP12.96□□□□□ -0.33
PRAME-204ENST00000403441 NAXDQ8IW45 347 aa12.96□□□□□ -0.33
PRAME-204ENST00000403441 CHCHD4Q8N4Q1 142 aa12.96□□□□□ -0.33
PRAME-204ENST00000403441 CCDC150Q8NCX0 1101 aa12.96□□□□□ -0.33
PRAME-204ENST00000403441 UCMAQ8WVF2 138 aa12.96□□□□□ -0.33
PRAME-204ENST00000403441 DCLK3Q9C098 648 aa12.96□□□□□ -0.33
PRAME-204ENST00000403441 NIF3L1Q9GZT8 377 aa12.96□□□□□ -0.33
PRAME-204ENST00000403441 CYP3A43Q9HB55 503 aa12.96□□□□□ -0.33
PRAME-204ENST00000403441 NMUR1Q9HB89 426 aa12.96□□□□□ -0.33
PRAME-204ENST00000403441 NUDT5Q9UKK9 219 aa12.96□□□□□ -0.33
PRAME-204ENST00000403441 LHX6Q9UPM6 363 aa12.96□□□□□ -0.33
PRAME-204ENST00000403441 SLC27A6Q9Y2P4 619 aa12.96□□□□□ -0.33
PRAME-204ENST00000403441 NFE2L3Q9Y4A8 694 aa12.96□□□□□ -0.33
PRAME-204ENST00000403441 DSPP15924 2871 aaKnown RBP12.96□□□□□ -0.34
PRAME-204ENST00000403441 DMXL2Q8TDJ6 3036 aa12.96□□□□□ -0.34
PRAME-204ENST00000403441 FREM2Q5SZK8 3169 aa12.95□□□□□ -0.34
PRAME-204ENST00000403441 A0A1B0GTW7 788 aa12.95□□□□□ -0.34
PRAME-204ENST00000403441 FAM221BA6H8Z2 402 aa12.95□□□□□ -0.34
PRAME-204ENST00000403441 PPP1R3GB7ZBB8 358 aa12.95□□□□□ -0.34
PRAME-204ENST00000403441 WASH3PC4AMC7 463 aa12.95□□□□□ -0.34
PRAME-204ENST00000403441 PENKP01210 267 aaPredicted RBP12.95□□□□□ -0.34
PRAME-204ENST00000403441 CYBBP04839 570 aa12.95□□□□□ -0.34
PRAME-204ENST00000403441 NCAM1P13591 858 aa12.95□□□□□ -0.34
PRAME-204ENST00000403441 CD58P19256 250 aa12.95□□□□□ -0.34
PRAME-204ENST00000403441 VAMP7P51809 220 aa12.95□□□□□ -0.34
PRAME-204ENST00000403441 KIF11P52732 1056 aa12.95□□□□□ -0.34
PRAME-204ENST00000403441 COG7P83436 770 aa12.95□□□□□ -0.34
PRAME-204ENST00000403441 GRIK2Q13002 908 aa12.95□□□□□ -0.34
PRAME-204ENST00000403441 ADAM9Q13443 819 aa12.95□□□□□ -0.34
PRAME-204ENST00000403441 COL9A2Q14055 689 aaPredicted RBP12.95□□□□□ -0.34
PRAME-204ENST00000403441 METTL3Q86U44 580 aaKnown RBP12.95□□□□□ -0.34
PRAME-204ENST00000403441 FAM186BQ8IYM0 893 aa12.95□□□□□ -0.34
PRAME-204ENST00000403441 ARHGAP18Q8N392 663 aa12.95□□□□□ -0.34
PRAME-204ENST00000403441 CADM4Q8NFZ8 388 aa12.95□□□□□ -0.34
PRAME-204ENST00000403441 TOE1Q96GM8 510 aaKnown RBP12.95□□□□□ -0.34
PRAME-204ENST00000403441 CAMK1GQ96NX5 476 aa12.95□□□□□ -0.34
PRAME-204ENST00000403441 IPO9Q96P70 1041 aaKnown RBP12.95□□□□□ -0.34
PRAME-204ENST00000403441 TWNKQ96RR1 684 aa12.95□□□□□ -0.34
PRAME-204ENST00000403441 CD93Q9NPY3 652 aa12.95□□□□□ -0.34
PRAME-204ENST00000403441 CLIC5Q9NZA1 410 aa12.95□□□□□ -0.34
PRAME-204ENST00000403441 USP36Q9P275 1121 aaKnown RBP12.95□□□□□ -0.34
PRAME-204ENST00000403441 RASAL2Q9UJF2 1139 aa12.95□□□□□ -0.34
PRAME-204ENST00000403441 FBXO10Q9UK96 956 aa12.95□□□□□ -0.34
PRAME-204ENST00000403441 STRIP2Q9ULQ0 834 aa12.95□□□□□ -0.34
PRAME-204ENST00000403441 SLC16A3O15427 465 aaKnown RBP12.94□□□□□ -0.34
PRAME-204ENST00000403441 CILPO75339 1184 aa12.94□□□□□ -0.34
PRAME-204ENST00000403441 GJB3O75712 270 aa12.94□□□□□ -0.34
PRAME-204ENST00000403441 HMBSP08397 361 aa12.94□□□□□ -0.34
PRAME-204ENST00000403441 FTH1P19P0C7X4 201 aa12.94□□□□□ -0.34
PRAME-204ENST00000403441 ACADMP11310 421 aa12.94□□□□□ -0.34
PRAME-204ENST00000403441 KRT13P13646 458 aa12.94□□□□□ -0.34
PRAME-204ENST00000403441 OXTRP30559 389 aa12.94□□□□□ -0.34
PRAME-204ENST00000403441 CORO1AP31146 461 aaKnown RBP12.94□□□□□ -0.34
PRAME-204ENST00000403441 MFAP3P55082 362 aa12.94□□□□□ -0.34
PRAME-204ENST00000403441 RING1Q06587 406 aa12.94□□□□□ -0.34
PRAME-204ENST00000403441 PPP3CAQ08209 521 aa12.94□□□□□ -0.34
PRAME-204ENST00000403441 EIF4HQ15056 248 aaKnown RBP12.94□□□□□ -0.34
PRAME-204ENST00000403441 ANKRD40Q6AI12 368 aa12.94□□□□□ -0.34
PRAME-204ENST00000403441 TTI2Q6NXR4 508 aa12.94□□□□□ -0.34
PRAME-204ENST00000403441 LRSAM1Q6UWE0 723 aa12.94□□□□□ -0.34
PRAME-204ENST00000403441 RSRC2Q7L4I2 434 aaKnown RBP12.94□□□□□ -0.34
PRAME-204ENST00000403441 ANKS1BQ7Z6G8 1248 aa12.94□□□□□ -0.34
PRAME-204ENST00000403441 SCD5Q86SK9 330 aa12.94□□□□□ -0.34
PRAME-204ENST00000403441 ZNF276Q8N554 614 aa12.94□□□□□ -0.34
PRAME-204ENST00000403441 ZCCHC9Q8N567 271 aaKnown RBP12.94□□□□□ -0.34
PRAME-204ENST00000403441 PRCCQ92733 491 aaPredicted RBP12.94□□□□□ -0.34
PRAME-204ENST00000403441 DHTKD1Q96HY7 919 aaPredicted RBP12.94□□□□□ -0.34
PRAME-204ENST00000403441 GPR174Q9BXC1 333 aa12.94□□□□□ -0.34
PRAME-204ENST00000403441 DUSP16Q9BY84 665 aa12.94□□□□□ -0.34
PRAME-204ENST00000403441 MIR1-1HGQ9H1L0 117 aa12.94□□□□□ -0.34
PRAME-204ENST00000403441 LMBRD1Q9NUN5 540 aa12.94□□□□□ -0.34
PRAME-204ENST00000403441 KIAA1468Q9P260 1216 aa12.94□□□□□ -0.34
PRAME-204ENST00000403441 THAP10Q9P2Z0 257 aaPredicted RBP12.94□□□□□ -0.34
PRAME-204ENST00000403441 APOBEC2Q9Y235 224 aaKnown RBP12.94□□□□□ -0.34
PRAME-204ENST00000403441 TRIM49BA6NDI0 452 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 PSMA7O14818 248 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 CETN3O15182 167 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 CER1O95813 267 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 KLKB1P03952 638 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 TRIM49P0CI25 452 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms