RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 CASTOR2A6NHX0 329 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 KPNA7A9QM74 516 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 RNF103O00237 685 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 BAG2O95816 211 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 SNRPAP09012 282 aaKnown RBP4.5□□□□□ -1.69
SMC6-203ENST00000402989 SRGAP2BP0DMP2 458 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 SMIM10L2AP0DMW4 78 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 SMIM10L2BP0DMW5 78 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 YBX3P16989 372 aaKnown RBP eCLIP4.5□□□□□ -1.691e-6■■■■□ 21.3
SMC6-203ENST00000402989 ATICP31939 592 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 STIP1P31948 543 aaKnown RBP4.5□□□□□ -1.69
SMC6-203ENST00000402989 ENPEPQ07075 957 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 BST1Q10588 318 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 PEX6Q13608 980 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 ACVR2BQ13705 512 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 KCNJ11Q14654 390 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 CCL14Q16627 93 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 GALNTL6Q49A17 601 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 PPM1JQ5JR12 505 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 MARCH8Q5T0T0 291 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 C9orf57Q5W0N0 161 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 WSCD1Q658N2 575 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 RWDD4Q6NW29 188 aaKnown RBP4.5□□□□□ -1.69
SMC6-203ENST00000402989 NOTUMQ6P988 496 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 GPR142Q7Z601 462 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 CLNKQ7Z7G1 428 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 CMC1Q7Z7K0 106 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 PIGZQ86VD9 579 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 RASSF3Q86WH2 238 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 CDKL3Q8IVW4 592 aaPredicted RBP4.5□□□□□ -1.69
SMC6-203ENST00000402989 ADGRF2Q8IZF7 708 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 COLGALT1Q8NBJ5 622 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 FAM13CQ8NE31 585 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 PPTC7Q8NI37 304 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 FNIP1Q8TF40 1166 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 SLC44A1Q8WWI5 657 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 FAM161BQ96MY7 647 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 CSPG4P5Q96PW8 444 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 CXorf56Q9H5V9 222 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 CYP4F11Q9HBI6 524 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.5□□□□□ -1.69
SMC6-203ENST00000402989 PACSIN3Q9UKS6 424 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 ACTL7BQ9Y614 415 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 LAMA3Q16787 3333 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 PTPRFP10586 1907 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 SMIM28A0A1B0GU29 152 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 FCHO1O14526 889 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 MOCS2O96007 188 aaPredicted RBP4.5□□□□□ -1.69
SMC6-203ENST00000402989 VAV1P15498 845 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 HOXA11P31270 313 aaPredicted RBP4.5□□□□□ -1.69
SMC6-203ENST00000402989 L1CAMP32004 1257 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 AQP5P55064 265 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 DEUP1Q05D60 604 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 BST2Q10589 180 aaKnown RBP4.5□□□□□ -1.69
SMC6-203ENST00000402989 MOGSQ13724 837 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 UBAP2LQ14157 1087 aaKnown RBP4.5□□□□□ -1.69
SMC6-203ENST00000402989 GPR162Q16538 588 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 TTC39BQ5VTQ0 682 aaPredicted RBP4.5□□□□□ -1.69
SMC6-203ENST00000402989 SYPL2Q5VXT5 272 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 OSTM1Q86WC4 334 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 TDRPQ86YL5 185 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 E2F7Q96AV8 911 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 CCDC124Q96CT7 223 aaKnown RBP4.5□□□□□ -1.69
SMC6-203ENST00000402989 KCNK16Q96T55 309 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 MYCBPQ99417 103 aaPredicted RBP4.5□□□□□ -1.69
SMC6-203ENST00000402989 NMUR2Q9GZQ4 415 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 POPDC2Q9HBU9 364 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 ARHGEF3Q9NR81 526 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 KRT82Q9NSB4 513 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 DTLQ9NZJ0 730 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 CPSF2Q9P2I0 782 aaKnown RBP4.5□□□□□ -1.69
SMC6-203ENST00000402989 FIS1Q9Y3D6 152 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 PSAT1Q9Y617 370 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 TEX264Q9Y6I9 313 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 ANK1P16157 1881 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 ARHGAP42A6NI28 874 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 SLC15A5A6NIM6 579 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 ZMPSTE24O75844 475 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 KRT38O76015 456 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 APOEP02649 317 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 USP17L7P0C7H9 530 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 T-ENOLP0DO92 83 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 NCAM1P13591 858 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 NCF2P19878 526 aaPredicted RBP4.5□□□□□ -1.69
SMC6-203ENST00000402989 AVPR1AP37288 418 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 PEX19P40855 299 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 GRM5P41594 1212 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 TKTL1P51854 596 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 ATXN3P54252 364 aaPredicted RBP4.5□□□□□ -1.69
SMC6-203ENST00000402989 EPHB1P54762 984 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 SLC8A3P57103 927 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 HIC1Q14526 733 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 KPNB1Q14974 876 aaKnown RBP4.5□□□□□ -1.69
SMC6-203ENST00000402989 LRRC36Q1X8D7 754 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 MUM1Q2TAK8 710 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 ANKRD20A2Q5SQ80 823 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 LGSNQ5TDP6 509 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 ANKRD20A1Q5TYW2 823 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 ISLR2Q6UXK2 745 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 DSTYKQ6XUX3 929 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms