RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 GLIS1Q8NBF1 620 aa19.09■□□□□ 0.65
USP48-204ENST00000400301 STK32AQ8WU08 396 aa19.09■□□□□ 0.65
USP48-204ENST00000400301 VANGL2Q9ULK5 521 aa19.09■□□□□ 0.65
USP48-204ENST00000400301 KIF3CO14782 793 aa19.09■□□□□ 0.65
USP48-204ENST00000400301 TIMM44O43615 452 aa19.09■□□□□ 0.65
USP48-204ENST00000400301 BNIP1Q12981 228 aa19.09■□□□□ 0.65
USP48-204ENST00000400301 PPIL2Q13356 520 aa19.09■□□□□ 0.65
USP48-204ENST00000400301 TMA16Q96EY4 203 aaKnown RBP19.09■□□□□ 0.65
USP48-204ENST00000400301 THAP1Q9NVV9 213 aa19.09■□□□□ 0.65
USP48-204ENST00000400301 NSMCE4AQ9NXX6 385 aa19.09■□□□□ 0.65
USP48-204ENST00000400301 SUFUQ9UMX1 484 aa19.09■□□□□ 0.65
USP48-204ENST00000400301 HSPA8P11142 646 aaKnown RBP19.08■□□□□ 0.65
USP48-204ENST00000400301 BST1Q10588 318 aa19.08■□□□□ 0.65
USP48-204ENST00000400301 CRYMQ14894 314 aa19.08■□□□□ 0.65
USP48-204ENST00000400301 PDCD6IPQ8WUM4 868 aaKnown RBP19.08■□□□□ 0.65
USP48-204ENST00000400301 ZNF670Q9BS34 389 aa19.08■□□□□ 0.65
USP48-204ENST00000400301 RNPEPL1Q9HAU8 725 aa19.08■□□□□ 0.65
USP48-204ENST00000400301 DOCK2Q92608 1830 aa19.08■□□□□ 0.64
USP48-204ENST00000400301 GDF10P55107 478 aa19.08■□□□□ 0.64
USP48-204ENST00000400301 SH3BGRP55822 239 aaPredicted RBP19.08■□□□□ 0.64
USP48-204ENST00000400301 TAS1R3Q7RTX0 852 aa19.08■□□□□ 0.64
USP48-204ENST00000400301 TMPRSS6Q8IU80 811 aa19.08■□□□□ 0.64
USP48-204ENST00000400301 MIPOL1Q8TD10 442 aa19.08■□□□□ 0.64
USP48-204ENST00000400301 CELF6Q96J87 481 aaKnown RBP19.08■□□□□ 0.64
USP48-204ENST00000400301 SYT15Q9BQS2 421 aa19.08■□□□□ 0.64
USP48-204ENST00000400301 TJP2Q9UDY2 1190 aa19.08■□□□□ 0.64
USP48-204ENST00000400301 UBA6A0AVT1 1052 aaPredicted RBP19.08■□□□□ 0.64
USP48-204ENST00000400301 TPH1P17752 444 aa19.08■□□□□ 0.64
USP48-204ENST00000400301 AP1ARQ63HQ0 302 aa19.08■□□□□ 0.64
USP48-204ENST00000400301 LCLAT1Q6UWP7 414 aa19.08■□□□□ 0.64
USP48-204ENST00000400301 MRPL45Q9BRJ2 306 aaKnown RBP19.08■□□□□ 0.64
USP48-204ENST00000400301 SUDS3Q9H7L9 328 aaPredicted RBP19.08■□□□□ 0.64
USP48-204ENST00000400301 CATSPERBQ9H7T0 1116 aa19.08■□□□□ 0.64
USP48-204ENST00000400301 C2CD2LO14523 706 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 FBXO21O94952 628 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 AVPR1AP37288 418 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 ACVR2BQ13705 512 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 RBBP5Q15291 538 aaKnown RBP19.07■□□□□ 0.64
USP48-204ENST00000400301 LINC00523Q86TU6 105 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 NETO2Q8NC67 525 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 TEPSINQ96N21 525 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 ANGPTL3Q9Y5C1 460 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 SNCAIPQ9Y6H5 919 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 A0A0A0MRY4 1105 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 THP07101 528 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 HOXC6P09630 235 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 YY1P25490 414 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 MED21Q13503 144 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 ZNF235Q14590 738 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 MFSD14CQ5VZR4 134 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 PIGZQ86VD9 579 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 SPATA13Q96N96 652 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 CAMKK2Q96RR4 588 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 CHEK2O96017 543 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 HMBSP08397 361 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 UBTFL6P0CB48 400 aaPredicted RBP19.07■□□□□ 0.64
USP48-204ENST00000400301 FOXN2P32314 431 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 ANO4Q32M45 955 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 ZNF398Q8TD17 642 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 TRPV6Q9H1D0 765 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 FBXO6Q9NRD1 293 aaPredicted RBP19.07■□□□□ 0.64
USP48-204ENST00000400301 ARHGAP26Q9UNA1 814 aa19.07■□□□□ 0.64
USP48-204ENST00000400301 GOLGA8CPA6NN73 597 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 E9PBE3 544 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 KLHL41O60662 606 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 TOMM70O94826 608 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 S100BP04271 92 aaPredicted RBP19.06■□□□□ 0.64
USP48-204ENST00000400301 SERPINE1P05121 402 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 PGAM1P18669 254 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 SLC1A6P48664 564 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 WDR4P57081 412 aaKnown RBP19.06■□□□□ 0.64
USP48-204ENST00000400301 ANKS1BQ7Z6G8 1248 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 POU5F2Q8N7G0 328 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 PLD5Q8N7P1 536 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 ANKRD52Q8NB46 1076 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 LGMNQ99538 433 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 EBNA1BP2Q99848 306 aaKnown RBP19.06■□□□□ 0.64
USP48-204ENST00000400301 CPA4Q9UI42 421 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 TELO2Q9Y4R8 837 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 KIF1CO43896 1103 aaKnown RBP19.06■□□□□ 0.64
USP48-204ENST00000400301 ENTPD5O75356 428 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 RASSF9O75901 435 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 ANXA9O76027 345 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 GOT1P17174 413 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 SKIV2L2P42285 1042 aaKnown RBP19.06■□□□□ 0.64
USP48-204ENST00000400301 YWHAHQ04917 246 aaPredicted RBP19.06■□□□□ 0.64
USP48-204ENST00000400301 RARS2Q5T160 578 aaKnown RBP19.06■□□□□ 0.64
USP48-204ENST00000400301 SNX30Q5VWJ9 437 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 TMEM192Q8IY95 271 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 BCORQ6W2J9 1755 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 ENO4A6NNW6 628 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 HACD1B0YJ81 288 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 CPB1P15086 417 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 ASPAP45381 313 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 DLK2Q6UY11 383 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 SKA2Q8WVK7 121 aaPredicted RBP19.06■□□□□ 0.64
USP48-204ENST00000400301 HSFY1Q96LI6 401 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 SYT11Q9BT88 431 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 CDYLQ9Y232 598 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 CASTOR2A6NHX0 329 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms