RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 DAB2IPQ5VWQ8 1189 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 CLDND1Q9NY35 253 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 HEMK1Q9Y5R4 338 aaPredicted RBP11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 SNCAIPQ9Y6H5 919 aa11.28□□□□□ -0.6
CACNA1C-210ENST00000399606 ATP2C1P98194 919 aaPredicted RBP11.27□□□□□ -0.6
CACNA1C-210ENST00000399606 C1orf54Q8WWF1 131 aa11.27□□□□□ -0.6
CACNA1C-210ENST00000399606 KRT35Q92764 455 aa11.27□□□□□ -0.6
CACNA1C-210ENST00000399606 PRMT6Q96LA8 375 aaPredicted RBP11.27□□□□□ -0.6
CACNA1C-210ENST00000399606 SUCOQ9UBS9 1254 aaKnown RBP11.27□□□□□ -0.6
CACNA1C-210ENST00000399606 CCL16O15467 120 aa11.27□□□□□ -0.6
CACNA1C-210ENST00000399606 POLBP06746 335 aa11.27□□□□□ -0.6
CACNA1C-210ENST00000399606 CCDC130P13994 396 aa11.27□□□□□ -0.6
CACNA1C-210ENST00000399606 HSPA9P38646 679 aaKnown RBP11.27□□□□□ -0.6
CACNA1C-210ENST00000399606 BIKQ13323 160 aa11.27□□□□□ -0.6
CACNA1C-210ENST00000399606 CDK20Q8IZL9 346 aa11.27□□□□□ -0.6
CACNA1C-210ENST00000399606 TINF2Q9BSI4 451 aa11.27□□□□□ -0.6
CACNA1C-210ENST00000399606 WDR35Q9P2L0 1181 aa11.27□□□□□ -0.6
CACNA1C-210ENST00000399606 MRPL42Q9Y6G3 142 aaKnown RBP11.27□□□□□ -0.6
CACNA1C-210ENST00000399606 SMNDC1O75940 238 aaKnown RBP eCLIP11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 PDX1P52945 283 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 PLOD1Q02809 727 aaPredicted RBP11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 NFE2Q16621 373 aaPredicted RBP11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 CXCL17Q6UXB2 119 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 GSPT2Q8IYD1 628 aaKnown RBP11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 GALNT4Q8N4A0 578 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 RSPH1Q8WYR4 309 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 NT5MQ9NPB1 228 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 ABHD10Q9NUJ1 306 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 SH3GLB1Q9Y371 365 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 ZNF839A8K0R7 811 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 FAM25AB3EWG3 89 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 FAM25CB3EWG5 89 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 FAM25GB3EWG6 89 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 H3BRB1 525 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 XPO1O14980 1071 aaKnown RBP11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 EXTL3O43909 919 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 GMFGO60234 142 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 GTF2H1P32780 548 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 SOX6P35712 828 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 TUFMP49411 452 aaKnown RBP11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 POU5F1Q01860 360 aaKnown RBP11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 SNRNP35Q16560 246 aaKnown RBP11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 AAK1Q2M2I8 961 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 OTOAQ7RTW8 1153 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 OR8H2Q8N162 312 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 NAT16Q8N8M0 369 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 PRMT1Q99873 361 aaKnown RBP11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 CCDC134Q9H6E4 229 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 ZCCHC17Q9NP64 241 aaKnown RBP11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 RAB6BQ9NRW1 208 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 CDYLQ9Y232 598 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 TRIM49BA6NDI0 452 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 RBAK-RBAKDNI3L0D1 243 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 PRODHO43272 600 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 ELNP15502 786 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 CES1P23141 567 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 GEMP55040 296 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 VAC14Q08AM6 782 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 SMTNL2Q2TAL5 461 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 RAET1GQ6H3X3 334 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 LRIG3Q6UXM1 1119 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 REXO1L1PQ8IX06 675 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 IZUMO1Q8IYV9 350 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 LGI2Q8N0V4 545 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 MRPL48Q96GC5 212 aaKnown RBP11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 KLC4Q9NSK0 619 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 L1RE1Q9UN81 338 aa11.27□□□□□ -0.61
CACNA1C-210ENST00000399606 TRIM43BA6NCK2 446 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 CSDE1O75534 798 aaKnown RBP11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 MFN2O95140 757 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 ABCB1P08183 1280 aaPredicted RBP11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 CLTBP09497 229 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 MYL2P10916 166 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 SCP2P22307 547 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 SCNN1AP37088 669 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 ERVK-9P63128 1117 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 ERVK-24P63145 666 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 KDSRQ06136 332 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 ZNF543Q08ER8 600 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 UGP2Q16851 508 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 FUT11Q495W5 492 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 PSRC1Q6PGN9 363 aaPredicted RBP11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 KIAA0408Q6ZU52 694 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 PTAR1Q7Z6K3 402 aaPredicted RBP11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 NEDD1Q8NHV4 660 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 TARS2Q9BW92 718 aaKnown RBP11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 WNT8AQ9H1J5 351 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 RSAD1Q9HA92 442 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 CDHR2Q9BYE9 1310 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 HIST1H2ABP04908 130 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 RAP1GAPP47736 663 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 CXCL9Q07325 125 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 FCHO2Q0JRZ9 810 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 HIST3H2AQ7L7L0 130 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 DENND6AQ8IWF6 608 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 HIST1H2ACQ93077 130 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 COL26A1Q96A83 441 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 PDGFCQ9NRA1 345 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 INTS13Q9NVM9 706 aa11.26□□□□□ -0.61
CACNA1C-210ENST00000399606 RIC8BQ9NVN3 520 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms