RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 NCBP2-AS2Q69YL0 99 aa23.87■■□□□ 1.41
RABGGTA-202ENST00000399409 MAML3Q96JK9 1138 aa23.87■■□□□ 1.41
RABGGTA-202ENST00000399409 RNPEPL1Q9HAU8 725 aa23.87■■□□□ 1.41
RABGGTA-202ENST00000399409 GEMIN8Q9NWZ8 242 aaKnown RBP23.87■■□□□ 1.41
RABGGTA-202ENST00000399409 DTLQ9NZJ0 730 aa23.87■■□□□ 1.41
RABGGTA-202ENST00000399409 NRCAMQ92823 1304 aa23.87■■□□□ 1.41
RABGGTA-202ENST00000399409 MATKP42679 507 aa23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 CDK18Q07002 472 aa23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 TMEM62Q0P6H9 643 aa23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 TIFABQ6ZNK6 161 aa23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 CDHR3Q6ZTQ4 885 aa23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 LIMS2Q7Z4I7 341 aa23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 CCDC185Q8N715 623 aa23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 HTR3CQ8WXA8 447 aa23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 N4BP2L2Q92802 583 aaPredicted RBP23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 PTCD3Q96EY7 689 aaKnown RBP23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 OLFM3Q96PB7 478 aa23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 NXF3Q9H4D5 531 aaKnown RBP23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 HES2Q9Y543 173 aa23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 USP3Q9Y6I4 520 aa23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 A0A0A0MRY4 1105 aa23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 CSH1P0DML2 217 aa23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 CSH2P0DML3 217 aa23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 EPHB2P29323 1055 aa23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 ATXN1P54253 815 aaKnown RBP23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 GRB14Q14449 540 aa23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 ANKRD20A3Q5VUR7 823 aa23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 APPL2Q8NEU8 664 aa23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 TNIP3Q96KP6 325 aa23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 SPATA13Q96N96 652 aa23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 TINF2Q9BSI4 451 aa23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 CDHR5Q9HBB8 845 aa23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 FZD10Q9ULW2 581 aa23.86■■□□□ 1.41
RABGGTA-202ENST00000399409 STK10O94804 968 aaKnown RBP23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 KCNE1P15382 129 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 CRHR1P34998 444 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 NBPF20Q3BBV1 942 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 STEAP4Q687X5 459 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 DPY19L2Q6NUT2 758 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 OSMRQ99650 979 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 FERMT1Q9BQL6 677 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 EIF2B3Q9NR50 452 aaKnown RBP23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 KCNK4Q9NYG8 393 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 SIRPGQ9P1W8 387 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 SMIM28A0A1B0GU29 152 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 XPO1O14980 1071 aaKnown RBP23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 BIRC5O15392 142 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 DIAPH2O60879 1101 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 AMPD1P23109 780 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 TAF6P49848 677 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 MRPS5P82675 430 aaKnown RBP23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 DBN1Q16643 649 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 SLC25A52Q3SY17 297 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 SV2CQ496J9 727 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 XKR4Q5GH76 650 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 GPR142Q7Z601 462 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 LRRN4Q8WUT4 740 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 DEPDC1BQ8WUY9 529 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 E2F7Q96AV8 911 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 BTBD10Q9BSF8 475 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 MOCS1Q9NZB8 636 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 NUMBLQ9Y6R0 609 aa23.85■■□□□ 1.41
RABGGTA-202ENST00000399409 MBLAC1A4D2B0 266 aaPredicted RBP23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 SMIM10L2AP0DMW4 78 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 SMIM10L2BP0DMW5 78 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 CALB2P22676 271 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 LMO2P25791 158 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 SERPINB3P29508 390 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 ANKRD20A2Q5SQ80 823 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 ANKRD20A1Q5TYW2 823 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 CCNJLQ8IV13 435 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 SLC2A14Q8TDB8 520 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 PDCD11Q14690 1871 aaKnown RBP23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 BTBD19C9JJ37 291 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 HCRTO43612 131 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 UGT1A9O60656 530 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 PEX11AO75192 247 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 DAB1O75553 588 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 ZNF189O75820 626 aaPredicted RBP23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 LMNAP02545 664 aaKnown RBP23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 CYP2C9P11712 490 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 GTF2A2P52657 109 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 SLC8A3P57103 927 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 FAM182AQ5T1J6 154 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 TRMT10BQ6PF06 316 aaKnown RBP23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 MPP5Q8N3R9 675 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 ARMC2Q8NEN0 867 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 CFAP61Q8NHU2 1237 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 APOL6Q9BWW8 343 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 UGT1A7Q9HAW7 530 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 UGT1A10Q9HAW8 530 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 UGT1A8Q9HAW9 530 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 ARL8BQ9NVJ2 186 aa23.84■■□□□ 1.41
RABGGTA-202ENST00000399409 SF3B1O75533 1304 aaKnown RBP eCLIP23.83■■□□□ 1.418e-6■■■■■ 107
RABGGTA-202ENST00000399409 H3BRJ5 948 aa23.83■■□□□ 1.41
RABGGTA-202ENST00000399409 ALDH1A2O94788 518 aa23.83■■□□□ 1.41
RABGGTA-202ENST00000399409 GOT1P17174 413 aa23.83■■□□□ 1.41
RABGGTA-202ENST00000399409 AKAP5P24588 427 aa23.83■■□□□ 1.41
RABGGTA-202ENST00000399409 SULT1E1P49888 294 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms