RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 FAM149B1Q96BN6 582 aa18.25■□□□□ 0.51
SMIM11A-202ENST00000399295 FAM122AQ96E09 287 aa18.25■□□□□ 0.51
SMIM11A-202ENST00000399295 CHFRQ96EP1 664 aa18.25■□□□□ 0.51
SMIM11A-202ENST00000399295 CPXM1Q96SM3 734 aa18.25■□□□□ 0.51
SMIM11A-202ENST00000399295 LMAN1LQ9HAT1 526 aa18.25■□□□□ 0.51
SMIM11A-202ENST00000399295 LUC7LQ9NQ29 371 aaKnown RBP18.25■□□□□ 0.51
SMIM11A-202ENST00000399295 HELZP42694 1942 aaKnown RBP18.25■□□□□ 0.51
SMIM11A-202ENST00000399295 TRDMT1O14717 391 aaKnown RBP18.24■□□□□ 0.51
SMIM11A-202ENST00000399295 ADH1CP00326 375 aa18.24■□□□□ 0.51
SMIM11A-202ENST00000399295 TUBB4AP04350 444 aa18.24■□□□□ 0.51
SMIM11A-202ENST00000399295 HMBSP08397 361 aa18.24■□□□□ 0.51
SMIM11A-202ENST00000399295 CHRNB1P11230 501 aa18.24■□□□□ 0.51
SMIM11A-202ENST00000399295 LY6G5CQ5SRR4 150 aa18.24■□□□□ 0.51
SMIM11A-202ENST00000399295 MAMSTRQ6ZN01 415 aa18.24■□□□□ 0.51
SMIM11A-202ENST00000399295 ZNF677Q86XU0 584 aa18.24■□□□□ 0.51
SMIM11A-202ENST00000399295 P2RY13Q9BPV8 354 aa18.24■□□□□ 0.51
SMIM11A-202ENST00000399295 TRIM62Q9BVG3 475 aa18.24■□□□□ 0.51
SMIM11A-202ENST00000399295 DCLK3Q9C098 648 aa18.24■□□□□ 0.51
SMIM11A-202ENST00000399295 SYNCQ9H7C4 482 aa18.24■□□□□ 0.51
SMIM11A-202ENST00000399295 TJP2Q9UDY2 1190 aa18.24■□□□□ 0.51
SMIM11A-202ENST00000399295 SFMBT1Q9UHJ3 866 aa18.24■□□□□ 0.51
SMIM11A-202ENST00000399295 HBS1LQ9Y450 684 aaKnown RBP18.24■□□□□ 0.51
SMIM11A-202ENST00000399295 KIF2AO00139 706 aaPredicted RBP18.23■□□□□ 0.51
SMIM11A-202ENST00000399295 KLKB1P03952 638 aa18.23■□□□□ 0.51
SMIM11A-202ENST00000399295 MMEP08473 750 aa18.23■□□□□ 0.51
SMIM11A-202ENST00000399295 NCAM1P13591 858 aa18.23■□□□□ 0.51
SMIM11A-202ENST00000399295 CDH5P33151 784 aaPredicted RBP18.23■□□□□ 0.51
SMIM11A-202ENST00000399295 PLA2G5P39877 138 aa18.23■□□□□ 0.51
SMIM11A-202ENST00000399295 GALK1P51570 392 aa18.23■□□□□ 0.51
SMIM11A-202ENST00000399295 YWHAZP63104 245 aaKnown RBP18.23■□□□□ 0.51
SMIM11A-202ENST00000399295 CDR2Q01850 454 aa18.23■□□□□ 0.51
SMIM11A-202ENST00000399295 ARID5AQ03989 594 aa18.23■□□□□ 0.51
SMIM11A-202ENST00000399295 GRSF1Q12849 480 aaKnown RBP eCLIP18.23■□□□□ 0.51
SMIM11A-202ENST00000399295 LRRC32Q14392 662 aa18.23■□□□□ 0.51
SMIM11A-202ENST00000399295 ASTE1Q2TB18 679 aaPredicted RBP18.23■□□□□ 0.51
SMIM11A-202ENST00000399295 TMEM196Q5HYL7 178 aa18.23■□□□□ 0.51
SMIM11A-202ENST00000399295 DGKKQ5KSL6 1271 aa18.23■□□□□ 0.51
SMIM11A-202ENST00000399295 C10orf76Q5T2E6 689 aa18.23■□□□□ 0.51
SMIM11A-202ENST00000399295 MSANTD2Q6P1R3 559 aa18.23■□□□□ 0.51
SMIM11A-202ENST00000399295 Q6ZNB5 142 aa18.23■□□□□ 0.51
SMIM11A-202ENST00000399295 IPO4Q8TEX9 1081 aaKnown RBP18.23■□□□□ 0.51
SMIM11A-202ENST00000399295 SLC20A1Q8WUM9 679 aa18.23■□□□□ 0.51
SMIM11A-202ENST00000399295 PLD4Q96BZ4 506 aa18.23■□□□□ 0.51
SMIM11A-202ENST00000399295 HAUS4Q9H6D7 363 aa18.23■□□□□ 0.51
SMIM11A-202ENST00000399295 NOCTQ9UK39 431 aaKnown RBP18.23■□□□□ 0.51
SMIM11A-202ENST00000399295 ZNF510Q9Y2H8 683 aa18.23■□□□□ 0.51
SMIM11A-202ENST00000399295 CAPN9O14815 690 aa18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 LSM8O95777 96 aaKnown RBP18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 ERBB2P04626 1255 aa18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 FYNP06241 537 aa18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 ADH5P11766 374 aa18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 CORO1AP31146 461 aaKnown RBP18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 GAD2Q05329 585 aa18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 TRIP4Q15650 581 aaPredicted RBP18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 PTPN20Q4JDL3 420 aa18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 NAIF1Q69YI7 327 aaPredicted RBP18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 OR6B2Q6IFH4 312 aa18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 ZNF662Q6ZS27 426 aa18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 BEND5Q7L4P6 421 aa18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 TMEM25Q86YD3 366 aa18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 DENND1CQ8IV53 801 aa18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 C17orf53Q8N3J3 647 aaPredicted RBP18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 PRSS33Q8NF86 280 aa18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 CD101Q93033 1021 aa18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 DESI2Q9BSY9 194 aa18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 POPDC2Q9HBU9 364 aa18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 FBRSL1Q9HCM7 1045 aaKnown RBP18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 SPHK2Q9NRA0 654 aa18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 RBM12Q9NTZ6 932 aaKnown RBP18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 TRMT1Q9NXH9 659 aaKnown RBP18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 NAALADL1Q9UQQ1 740 aa18.22■□□□□ 0.51
SMIM11A-202ENST00000399295 MSI1O43347 362 aaKnown RBP18.21■□□□□ 0.51
SMIM11A-202ENST00000399295 GLI1P08151 1106 aa18.21■□□□□ 0.51
SMIM11A-202ENST00000399295 PLEKP08567 350 aaPredicted RBP18.21■□□□□ 0.51
SMIM11A-202ENST00000399295 CHRNB2P17787 502 aa18.21■□□□□ 0.51
SMIM11A-202ENST00000399295 DRD1P21728 446 aa18.21■□□□□ 0.51
SMIM11A-202ENST00000399295 HARS2P49590 506 aaKnown RBP18.21■□□□□ 0.51
SMIM11A-202ENST00000399295 CCINQ13939 588 aa18.21■□□□□ 0.51
SMIM11A-202ENST00000399295 TAF5Q15542 800 aa18.21■□□□□ 0.51
SMIM11A-202ENST00000399295 SLC18A3Q16572 532 aa18.21■□□□□ 0.51
SMIM11A-202ENST00000399295 GAB4Q2WGN9 574 aa18.21■□□□□ 0.51
SMIM11A-202ENST00000399295 ANO4Q32M45 955 aa18.21■□□□□ 0.51
SMIM11A-202ENST00000399295 EFHC1Q5JVL4 640 aa18.21■□□□□ 0.51
SMIM11A-202ENST00000399295 FSTL4Q6MZW2 842 aa18.21■□□□□ 0.51
SMIM11A-202ENST00000399295 FAM183BPQ6ZVS7 135 aa18.21■□□□□ 0.51
SMIM11A-202ENST00000399295 ERICH1Q86X53 443 aa18.21■□□□□ 0.51
SMIM11A-202ENST00000399295 C1orf210Q8IVY1 113 aa18.21■□□□□ 0.51
SMIM11A-202ENST00000399295 REXO1L1PQ8IX06 675 aa18.21■□□□□ 0.51
SMIM11A-202ENST00000399295 SYNPOQ8N3V7 929 aa18.21■□□□□ 0.51
SMIM11A-202ENST00000399295 CHRDQ9H2X0 955 aa18.21■□□□□ 0.51
SMIM11A-202ENST00000399295 SPATA6Q9NWH7 488 aaPredicted RBP18.21■□□□□ 0.51
SMIM11A-202ENST00000399295 AGO1Q9UL18 857 aaKnown RBP18.21■□□□□ 0.51
SMIM11A-202ENST00000399295 OPRD1P41143 372 aa18.2■□□□□ 0.5
SMIM11A-202ENST00000399295 FMO1Q01740 532 aa18.2■□□□□ 0.5
SMIM11A-202ENST00000399295 SYPL2Q5VXT5 272 aa18.2■□□□□ 0.5
SMIM11A-202ENST00000399295 NAA35Q5VZE5 725 aa18.2■□□□□ 0.5
SMIM11A-202ENST00000399295 OLFML1Q6UWY5 402 aa18.2■□□□□ 0.5
SMIM11A-202ENST00000399295 ZNF571Q7Z3V5 609 aaPredicted RBP18.2■□□□□ 0.5
SMIM11A-202ENST00000399295 ZDHHC17Q8IUH5 632 aa18.2■□□□□ 0.5
SMIM11A-202ENST00000399295 MSANTD4Q8NCY6 345 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms