RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 KCNT2Q6UVM3 1135 aa5.09□□□□□ -1.6
SMAD4-202ENST00000398417 CDHR3Q6ZTQ4 885 aa5.09□□□□□ -1.6
SMAD4-202ENST00000398417 CDCA5Q96FF9 252 aa5.09□□□□□ -1.6
SMAD4-202ENST00000398417 POLE3Q9NRF9 147 aa5.09□□□□□ -1.6
SMAD4-202ENST00000398417 UBP1Q9NZI7 540 aa5.09□□□□□ -1.6
SMAD4-202ENST00000398417 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.09□□□□□ -1.6
SMAD4-202ENST00000398417 UBAP2LQ14157 1087 aaKnown RBP5.08□□□□□ -1.6
SMAD4-202ENST00000398417 PRAMEF19Q5SWL8 479 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 MIEF2Q96C03 454 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 ELMO2Q96JJ3 720 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 CAB39LQ9H9S4 337 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 PGAP2Q9UHJ9 254 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 GPC4O75487 556 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 SPAG6O75602 509 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 TRPA1O75762 1119 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 SLC34A1Q06495 639 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 FAPQ12884 760 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 PRKD1Q15139 912 aaPredicted RBP5.08□□□□□ -1.6
SMAD4-202ENST00000398417 GRAMD1BQ3KR37 738 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 SLC45A4Q5BKX6 768 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 TDRPQ86YL5 185 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 MPP5Q8N3R9 675 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 ADAM32Q8TC27 787 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 SLC44A1Q8WWI5 657 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 SCG3Q8WXD2 468 aaKnown RBP5.08□□□□□ -1.6
SMAD4-202ENST00000398417 ATP2A3Q93084 1043 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 MCRS1Q96EZ8 462 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 LGMNQ99538 433 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 ULBP1Q9BZM6 244 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 DENND2DQ9H6A0 471 aaPredicted RBP5.08□□□□□ -1.6
SMAD4-202ENST00000398417 ERAP1Q9NZ08 941 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 SNX10Q9Y5X0 201 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.08□□□□□ -1.6
SMAD4-202ENST00000398417 MSCO60682 206 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 TGM2P21980 687 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 MLH1P40692 756 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 GBE1Q04446 702 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 RIPK1Q13546 671 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 HIC1Q14526 733 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 TNFAIP8L3Q5GJ75 292 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 NAIF1Q69YI7 327 aaPredicted RBP5.08□□□□□ -1.6
SMAD4-202ENST00000398417 PQLC3Q8N755 202 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 GSDMBQ8TAX9 411 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 MAGEC3Q8TD91 643 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 SLC16A10Q8TF71 515 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 TEKT4Q8WW24 435 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 FICDQ9BVA6 458 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 VPS33BQ9H267 617 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 GTSE1Q9NYZ3 720 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 BFARQ9NZS9 450 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 MPDZO75970 2070 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 GMNNO75496 209 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 RALBP11234 206 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 CPA3P15088 417 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 TSHRP16473 764 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 CYP3A5P20815 502 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 MAPK8P45983 427 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 TAF6P49848 677 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 SLC25A11Q02978 314 aaKnown RBP5.08□□□□□ -1.6
SMAD4-202ENST00000398417 ACAP2Q15057 778 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 DCAF6Q58WW2 860 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 IL31Q6EBC2 164 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 IZUMO2Q6UXV1 221 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 PLPPR4Q7Z2D5 763 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 PLD5Q8N7P1 536 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 SLC2A14Q8TDB8 520 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 DNAJB3Q8WWF6 145 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 MAML3Q96JK9 1138 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 TSC22D3Q99576 134 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 LRMDAQ9H2I8 198 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 ASB7Q9H672 318 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 C20orf96Q9NUD7 363 aaPredicted RBP5.08□□□□□ -1.6
SMAD4-202ENST00000398417 NDE1Q9NXR1 346 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.08□□□□□ -1.6
SMAD4-202ENST00000398417 EME2A4GXA9 379 aaPredicted RBP5.08□□□□□ -1.6
SMAD4-202ENST00000398417 KPNA7A9QM74 516 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 PRR5-ARHGAP8B1AHC4 643 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 E9PBE3 544 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 DFFAO00273 331 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 AIM2O14862 343 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 TM9SF1O15321 606 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 PAPSS1O43252 624 aaPredicted RBP5.08□□□□□ -1.6
SMAD4-202ENST00000398417 KLHL41O60662 606 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 CNMDO75829 334 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 ATG7O95352 703 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 HMBSP08397 361 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 ZCCHC18P0CG32 403 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 ZFXP17010 805 aaPredicted RBP5.08□□□□□ -1.6
SMAD4-202ENST00000398417 GLRBP48167 497 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 SLC12A2P55011 1212 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 ARHGAP8P85298 464 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 BST2Q10589 180 aaKnown RBP5.08□□□□□ -1.6
SMAD4-202ENST00000398417 TARBP2Q15633 366 aaKnown RBP5.08□□□□□ -1.6
SMAD4-202ENST00000398417 TFB1MQ8WVM0 346 aaKnown RBP5.08□□□□□ -1.6
SMAD4-202ENST00000398417 HTR3CQ8WXA8 447 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 C12orf42Q96LP6 360 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 ZNF560Q96MR9 790 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 LHX5Q9H2C1 402 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 TASP1Q9H6P5 420 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 ZNF358Q9NW07 568 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 178.1 ms