RNA–Protein interactions for RNA: ENST00000398138.4

RDH16-202, Transcript of retinol dehydrogenase 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDH16, Length 2,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH16-202ENST00000398138 NEFHP12036 1026 aa13.24□□□□□ -0.29
RDH16-202ENST00000398138 VAV1P15498 845 aa13.24□□□□□ -0.29
RDH16-202ENST00000398138 WARSP23381 471 aaKnown RBP13.24□□□□□ -0.29
RDH16-202ENST00000398138 ACAT1P24752 427 aaKnown RBP13.24□□□□□ -0.29
RDH16-202ENST00000398138 SLC8A1P32418 973 aa13.24□□□□□ -0.29
RDH16-202ENST00000398138 CRYBB1P53674 252 aaPredicted RBP13.24□□□□□ -0.29
RDH16-202ENST00000398138 TWF2Q6IBS0 349 aaKnown RBP13.24□□□□□ -0.29
RDH16-202ENST00000398138 NLRP9Q7RTR0 991 aa13.24□□□□□ -0.29
RDH16-202ENST00000398138 CHSY1Q86X52 802 aa13.24□□□□□ -0.29
RDH16-202ENST00000398138 TOP6BLQ8N6T0 577 aa13.24□□□□□ -0.29
RDH16-202ENST00000398138 HTR3CQ8WXA8 447 aa13.24□□□□□ -0.29
RDH16-202ENST00000398138 TSPAN18Q96SJ8 248 aa13.24□□□□□ -0.29
RDH16-202ENST00000398138 TSSK1BQ9BXA7 367 aa13.24□□□□□ -0.29
RDH16-202ENST00000398138 DUSP16Q9BY84 665 aa13.24□□□□□ -0.29
RDH16-202ENST00000398138 SMYD2Q9NRG4 433 aa13.24□□□□□ -0.29
RDH16-202ENST00000398138 COX16Q9P0S2 106 aa13.24□□□□□ -0.29
RDH16-202ENST00000398138 DCTN4Q9UJW0 460 aa13.24□□□□□ -0.29
RDH16-202ENST00000398138 DAB1O75553 588 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 NPR3P17342 541 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 SEMA5AQ13591 1074 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 C2orf69Q8N8R5 385 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 GSDMBQ8TAX9 411 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 TBC1D31Q96DN5 1066 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 SIGLEC10Q96LC7 697 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 OLFM3Q96PB7 478 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 SRPK1Q96SB4 655 aaKnown RBP13.23□□□□□ -0.29
RDH16-202ENST00000398138 LGMNQ99538 433 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 HNRNPABQ99729 332 aaKnown RBP13.23□□□□□ -0.29
RDH16-202ENST00000398138 EBNA1BP2Q99848 306 aaKnown RBP13.23□□□□□ -0.29
RDH16-202ENST00000398138 ARHGEF4Q9NR80 690 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 A8MUI8 341 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 C2CD2LO14523 706 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 CYB561D2O14569 222 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 MFSD11O43934 449 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 UGT1A9O60656 530 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 ATP5HO75947 161 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 BEST1O76090 585 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 CELF2O95319 508 aaKnown RBP13.23□□□□□ -0.29
RDH16-202ENST00000398138 GSTA2P09210 222 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 CSH1P0DML2 217 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 CSH2P0DML3 217 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 GRIA1P42261 906 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 PITX1P78337 314 aaPredicted RBP13.23□□□□□ -0.29
RDH16-202ENST00000398138 MRPS5P82675 430 aaKnown RBP13.23□□□□□ -0.29
RDH16-202ENST00000398138 BMPR2Q13873 1038 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 E2F5Q15329 346 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 CCL14Q16627 93 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 PLEKHG4Q58EX7 1191 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 LGSNQ5TDP6 509 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 DOCK3Q8IZD9 2030 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 RFWD2Q8NHY2 731 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 ZNF398Q8TD17 642 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 TMEM237Q96Q45 408 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 UGT1A7Q9HAW7 530 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 UGT1A10Q9HAW8 530 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 UGT1A8Q9HAW9 530 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 XAB2Q9HCS7 855 aaKnown RBP13.23□□□□□ -0.29
RDH16-202ENST00000398138 TMPRSS4Q9NRS4 437 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 RCOR3Q9P2K3 495 aaPredicted RBP13.23□□□□□ -0.29
RDH16-202ENST00000398138 HAO1Q9UJM8 370 aa13.23□□□□□ -0.29
RDH16-202ENST00000398138 A0A0A0MRY4 1105 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 HACD1B0YJ81 288 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 PTGESO14684 152 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 DGKIO75912 1065 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 PTPN1P18031 435 aaKnown RBP13.22□□□□□ -0.29
RDH16-202ENST00000398138 BGNP21810 368 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 TAF1BQ53T94 588 aaPredicted RBP13.22□□□□□ -0.29
RDH16-202ENST00000398138 ANKRD20A2Q5SQ80 823 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 ANKRD20A1Q5TYW2 823 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 ANKRD20A3Q5VUR7 823 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 OTUD1Q5VV17 481 aaPredicted RBP13.22□□□□□ -0.29
RDH16-202ENST00000398138 WSCD1Q658N2 575 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 ZNF449Q6P9G9 518 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 TRMT10BQ6PF06 316 aaKnown RBP13.22□□□□□ -0.29
RDH16-202ENST00000398138 CDHR3Q6ZTQ4 885 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 BZW1Q7L1Q6 419 aaKnown RBP13.22□□□□□ -0.29
RDH16-202ENST00000398138 SIX6OS1Q8N1H7 587 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 NETO2Q8NC67 525 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 RNF139Q8WU17 664 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 ZFP42Q96MM3 310 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 SPATA13Q96N96 652 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 MED10Q9BTT4 135 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 AP5M1Q9H0R1 490 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 LRRC4Q9HBW1 653 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 ZFP69BQ9UJL9 534 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 PCDHA11Q9Y5I1 949 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 A0A0G2JND7 137 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 KRT38O76015 456 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 SERPINB4P48594 390 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 NDUFV1P49821 464 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 SARNPP82979 210 aaKnown RBP13.22□□□□□ -0.29
RDH16-202ENST00000398138 AP1B1Q10567 949 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 NME3Q13232 169 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 IRF5Q13568 498 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 MDH1BQ5I0G3 518 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 RAB3IPQ96QF0 476 aaPredicted RBP13.22□□□□□ -0.29
RDH16-202ENST00000398138 KATNAL1Q9BW62 490 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 TRIM55Q9BYV6 548 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 LRMDAQ9H2I8 198 aa13.22□□□□□ -0.29
RDH16-202ENST00000398138 FAM159BA6NKW6 160 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms