RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 PHOSPHO2Q8TCD6 241 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 ATP8B4Q8TF62 1192 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 DYNLL2Q96FJ2 89 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 TMEM68Q96MH6 324 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 ANKRD27Q96NW4 1050 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 ZIM3Q96PE6 472 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 DHRS9Q9BPW9 319 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 TLR10Q9BXR5 811 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 EBF2Q9HAK2 575 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 IL17RBQ9NRM6 502 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 PCOLCE2Q9UKZ9 415 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 CLEC11AQ9Y240 323 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 VCANP13611 3396 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 COL1A1P02452 1464 aaPredicted RBP6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 NCF1BA6NI72 391 aaPredicted RBP6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 RRN3P2A6NIE6 340 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 NCF1CA8MVU1 366 aaPredicted RBP6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 TREHO43280 583 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 CLPTM1O96005 669 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 ZBTB48P10074 688 aaPredicted RBP6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 COL6A2P12110 1019 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 POLR2CP19387 275 aaPredicted RBP6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 ATP1A2P50993 1020 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 FXR2P51116 673 aaKnown RBP eCLIP6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 FAM26FQ5R3K3 315 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 MEX3BQ6ZN04 569 aaKnown RBP6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 DPP9Q86TI2 863 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 PASD1Q8IV76 773 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 MAP4K3Q8IVH8 894 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 SLC41A1Q8IVJ1 513 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 MREGQ8N565 214 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 NEDD1Q8NHV4 660 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 FBF1Q8TES7 1133 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 RAD54LQ92698 747 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 CELF1Q92879 486 aaKnown RBP6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 RMDN1Q96DB5 314 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 KRT12Q99456 494 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 EYA3Q99504 573 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 SRA1Q9HD15 236 aaKnown RBP6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 ASNSD1Q9NWL6 643 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 ATP6V1HQ9UI12 483 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 VAV3Q9UKW4 847 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 DNAJC16Q9Y2G8 782 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 ZFP37Q9Y6Q3 630 aaPredicted RBP6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 KDM3AQ9Y4C1 1321 aa6.81□□□□□ -1.32
TM9SF4-202ENST00000398022 LOC100653049A0A140TA62 436 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 MYMKA6NI61 221 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 MYO1FO00160 1098 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 DNAJB5O75953 348 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 KRT34O76011 436 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 FARP2O94887 1054 aaPredicted RBP6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 ANXA8P13928 327 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 HSD3B1P14060 373 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 SSTR3P32745 418 aaPredicted RBP6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 RGS19P49795 217 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 EEF1A1P68104 462 aaKnown RBP6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 EEF1A2Q05639 463 aaKnown RBP6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 ITKQ08881 620 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 HNRNPDQ14103 355 aaKnown RBP6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 GRM3Q14832 879 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 ODF2Q5BJF6 829 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 FSCBQ5H9T9 825 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 ANXA8L1Q5VT79 327 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 EEF1A1P5Q5VTE0 462 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 KCTD16Q68DU8 428 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 MAP7D3Q8IWC1 876 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 SCUBE1Q8IWY4 988 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 SLC38A6Q8IZM9 456 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 AVL9Q8NBF6 648 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 ATAD1Q8NBU5 361 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 ZNF384Q8TF68 577 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 TGFBRAP1Q8WUH2 860 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 NSMCE1Q8WV22 266 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 SEPT8Q92599 483 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 MSANTD3Q96H12 275 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 NTMT1Q9BV86 223 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 BTBD2Q9BX70 525 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 PACSIN1Q9BY11 444 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 EPN3Q9H201 632 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 MVB12BQ9H7P6 319 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 GDF3Q9NR23 364 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 C19orf53Q9UNZ5 99 aaPredicted RBP6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 SAMM50Q9Y512 469 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 SRRM3A6NNA2 597 aaPredicted RBP6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 TARM1B6A8C7 271 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 ADAMTS3O15072 1205 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 DDX3YO15523 660 aaKnown RBP6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 CCNDBP1O95273 360 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 KRT6AP02538 564 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 LMNAP02545 664 aaKnown RBP6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 KRT6BP04259 564 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 RAB14P61106 215 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 RAB33AQ14088 237 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 NAB2Q15742 525 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 SLC18A3Q16572 532 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 ECM1Q16610 540 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 ALG11Q2TAA5 492 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 USP39Q53GS9 565 aaKnown RBP6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 KLHDC7AQ5VTJ3 777 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms