RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 IFNB1P01574 187 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 NCAM1P13591 858 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 ZFXP17010 805 aaPredicted RBP17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 BCAR1P56945 870 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 GPS1Q13098 491 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 TCTN1Q2MV58 587 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 SLC39A12Q504Y0 691 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 SLC9A4Q6AI14 798 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 PM20D1Q6GTS8 502 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 CEP128Q6ZU80 1094 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 BNIPLQ7Z465 357 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 LRRC34Q8IZ02 419 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 MGARPQ8TDB4 240 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 ARHGEF2Q92974 986 aaKnown RBP17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 TRIM62Q9BVG3 475 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 COX16Q9P0S2 106 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 CYP2F1P24903 491 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 GRIK1P39086 918 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 ARL4AP40617 200 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 GATMP50440 423 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 ROR1Q01973 937 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 NME3Q13232 169 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 LRRC14Q15048 493 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 NFE2Q16621 373 aaPredicted RBP17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 SPRED3Q2MJR0 410 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 C1orf53Q5VUE5 145 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 DARS2Q6PI48 645 aaKnown RBP17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 C1orf228Q6PIY5 440 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 NPNTQ6UXI9 565 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 DEFB128Q7Z7B8 93 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 PLD5Q8N7P1 536 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 PCDH19Q8TAB3 1148 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 SLC7A14Q8TBB6 771 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 TMEM175Q9BSA9 504 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 NINJ2Q9NZG7 142 aa17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 TPX2Q9ULW0 747 aaKnown RBP17.8■□□□□ 0.44
SCNN1A-205ENST00000396966 FYNP06241 537 aa17.79■□□□□ 0.44
SCNN1A-205ENST00000396966 VIMP08670 466 aaKnown RBP17.79■□□□□ 0.44
SCNN1A-205ENST00000396966 ZSCAN5DPP0CG00 497 aa17.79■□□□□ 0.44
SCNN1A-205ENST00000396966 ETS1P14921 441 aa17.79■□□□□ 0.44
SCNN1A-205ENST00000396966 STIP1P31948 543 aaKnown RBP17.79■□□□□ 0.44
SCNN1A-205ENST00000396966 CYP2C18P33260 490 aa17.79■□□□□ 0.44
SCNN1A-205ENST00000396966 MNX1P50219 401 aaPredicted RBP17.79■□□□□ 0.44
SCNN1A-205ENST00000396966 AIF1P55008 147 aa17.79■□□□□ 0.44
SCNN1A-205ENST00000396966 ACTN3Q08043 901 aaPredicted RBP17.79■□□□□ 0.44
SCNN1A-205ENST00000396966 VARS2Q5ST30 1063 aaKnown RBP17.79■□□□□ 0.44
SCNN1A-205ENST00000396966 OTUD1Q5VV17 481 aaPredicted RBP17.79■□□□□ 0.44
SCNN1A-205ENST00000396966 HIBCHQ6NVY1 386 aaPredicted RBP17.79■□□□□ 0.44
SCNN1A-205ENST00000396966 PCGF5Q86SE9 256 aa17.79■□□□□ 0.44
SCNN1A-205ENST00000396966 CEP57Q86XR8 500 aa17.79■□□□□ 0.44
SCNN1A-205ENST00000396966 PQLC3Q8N755 202 aa17.79■□□□□ 0.44
SCNN1A-205ENST00000396966 C9orf72Q96LT7 481 aa17.79■□□□□ 0.44
SCNN1A-205ENST00000396966 SERPINB12Q96P63 405 aa17.79■□□□□ 0.44
SCNN1A-205ENST00000396966 KCTD15Q96SI1 283 aaPredicted RBP17.79■□□□□ 0.44
SCNN1A-205ENST00000396966 SLC9A7Q96T83 725 aa17.79■□□□□ 0.44
SCNN1A-205ENST00000396966 FOXP3Q9BZS1 431 aa17.79■□□□□ 0.44
SCNN1A-205ENST00000396966 RCOR3Q9P2K3 495 aaPredicted RBP17.79■□□□□ 0.44
SCNN1A-205ENST00000396966 TBKBP1A7MCY6 615 aa17.78■□□□□ 0.44
SCNN1A-205ENST00000396966 H7C0C1 242 aa17.78■□□□□ 0.44
SCNN1A-205ENST00000396966 F9P00740 461 aa17.78■□□□□ 0.44
SCNN1A-205ENST00000396966 ATP5OP48047 213 aa17.78■□□□□ 0.44
SCNN1A-205ENST00000396966 PITX1P78337 314 aaPredicted RBP17.78■□□□□ 0.44
SCNN1A-205ENST00000396966 FAM171A1Q5VUB5 890 aa17.78■□□□□ 0.44
SCNN1A-205ENST00000396966 CCDC13Q8IYE1 715 aa17.78■□□□□ 0.44
SCNN1A-205ENST00000396966 PRDM16Q9HAZ2 1276 aa17.78■□□□□ 0.44
SCNN1A-205ENST00000396966 TBK1Q9UHD2 729 aa17.78■□□□□ 0.44
SCNN1A-205ENST00000396966 USP3Q9Y6I4 520 aa17.78■□□□□ 0.44
SCNN1A-205ENST00000396966 CEP350Q5VT06 3117 aa17.78■□□□□ 0.44
SCNN1A-205ENST00000396966 OR4Q2P0C623 313 aa17.78■□□□□ 0.44
SCNN1A-205ENST00000396966 ELAVL2Q12926 359 aaKnown RBP17.78■□□□□ 0.44
SCNN1A-205ENST00000396966 CTXN3Q4LDR2 81 aa17.78■□□□□ 0.44
SCNN1A-205ENST00000396966 EFHC2Q5JST6 749 aa17.78■□□□□ 0.44
SCNN1A-205ENST00000396966 ZC3H18Q86VM9 953 aaKnown RBP17.78■□□□□ 0.44
SCNN1A-205ENST00000396966 CRIPAKQ8N1N5 446 aa17.78■□□□□ 0.44
SCNN1A-205ENST00000396966 PGAP3Q96FM1 320 aaPredicted RBP17.78■□□□□ 0.44
SCNN1A-205ENST00000396966 FUBP3Q96I24 572 aaKnown RBP eCLIP17.78■□□□□ 0.44
SCNN1A-205ENST00000396966 PIGVQ9NUD9 493 aa17.78■□□□□ 0.44
SCNN1A-205ENST00000396966 MTMR10Q9NXD2 777 aa17.78■□□□□ 0.44
SCNN1A-205ENST00000396966 ABI2Q9NYB9 513 aaPredicted RBP17.78■□□□□ 0.44
SCNN1A-205ENST00000396966 HEY1Q9Y5J3 304 aa17.78■□□□□ 0.44
SCNN1A-205ENST00000396966 SF3B1O75533 1304 aaKnown RBP eCLIP17.78■□□□□ 0.44
SCNN1A-205ENST00000396966 SLC11A1P49279 550 aa17.77■□□□□ 0.44
SCNN1A-205ENST00000396966 ZNF280DQ6N043 979 aa17.77■□□□□ 0.44
SCNN1A-205ENST00000396966 BHLHA9Q7RTU4 235 aa17.77■□□□□ 0.44
SCNN1A-205ENST00000396966 TAX1BP1Q86VP1 789 aa17.77■□□□□ 0.44
SCNN1A-205ENST00000396966 UNC45BQ8IWX7 931 aa17.77■□□□□ 0.44
SCNN1A-205ENST00000396966 DYDC1Q8WWB3 177 aa17.77■□□□□ 0.44
SCNN1A-205ENST00000396966 ZNF333Q96JL9 665 aa17.77■□□□□ 0.44
SCNN1A-205ENST00000396966 CSPG4P5Q96PW8 444 aa17.77■□□□□ 0.44
SCNN1A-205ENST00000396966 MLXIPLQ9NP71 852 aa17.77■□□□□ 0.44
SCNN1A-205ENST00000396966 KCNK9Q9NPC2 374 aa17.77■□□□□ 0.44
SCNN1A-205ENST00000396966 ATP11BQ9Y2G3 1177 aa17.77■□□□□ 0.44
SCNN1A-205ENST00000396966 COL4A4P53420 1690 aaPredicted RBP17.77■□□□□ 0.44
SCNN1A-205ENST00000396966 TMEM120BA0PK00 339 aa17.77■□□□□ 0.43
SCNN1A-205ENST00000396966 OR6C75A6NL08 312 aa17.77■□□□□ 0.43
SCNN1A-205ENST00000396966 GDF10P55107 478 aa17.77■□□□□ 0.43
SCNN1A-205ENST00000396966 IKBKEQ14164 716 aa17.77■□□□□ 0.43
SCNN1A-205ENST00000396966 MORF4L2Q15014 288 aa17.77■□□□□ 0.43
SCNN1A-205ENST00000396966 BSPRYQ5W0U4 402 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms