RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 SF3B1O75533 1304 aaKnown RBP eCLIP16.06■□□□□ 0.168e-6■■■■■ 107
GNE-202ENST00000396594 RPSAP08865 295 aaKnown RBP16.06■□□□□ 0.16
GNE-202ENST00000396594 CRYBB1P53674 252 aaPredicted RBP16.06■□□□□ 0.16
GNE-202ENST00000396594 DEFA1P59665 94 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 DEFA3P59666 94 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 MRPS6P82932 125 aaKnown RBP16.06■□□□□ 0.16
GNE-202ENST00000396594 PARP6Q2NL67 630 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 KYAT3Q6YP21 454 aaKnown RBP16.06■□□□□ 0.16
GNE-202ENST00000396594 GSPT2Q8IYD1 628 aaKnown RBP16.06■□□□□ 0.16
GNE-202ENST00000396594 DACH2Q96NX9 599 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 TMEM161AQ9NX61 479 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 TSPAN16Q9UKR8 245 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 ZNF185O15231 689 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 CAND2O75155 1236 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 S100A5P33763 92 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 C16orf87Q6PH81 154 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 AADATQ8N5Z0 425 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 PDP2Q9P2J9 529 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 RBM47A0AV96 593 aaKnown RBP16.06■□□□□ 0.16
GNE-202ENST00000396594 LRRC14Q15048 493 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 INSCQ1MX18 579 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 LONP2Q86WA8 852 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 CEP70Q8NHQ1 597 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 SLC35C1Q96A29 364 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 ZFP42Q96MM3 310 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 ECSITQ9BQ95 431 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 FUCA2Q9BTY2 467 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 ZMYM5Q9UJ78 669 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 FMN2Q9NZ56 1722 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 CSH1P0DML2 217 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 CSH2P0DML3 217 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 ALADP13716 330 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 NEK2P51955 445 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 KPNB1Q14974 876 aaKnown RBP16.06■□□□□ 0.16
GNE-202ENST00000396594 EME1Q96AY2 570 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 FAM153AQ9UHL3 310 aa16.06■□□□□ 0.16
GNE-202ENST00000396594 PDE2AO00408 941 aaPredicted RBP16.05■□□□□ 0.16
GNE-202ENST00000396594 ACADMP11310 421 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 CXCR2P25025 360 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 SLC29A2Q14542 456 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 ABHD8Q96I13 439 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 ASTN2O75129 1339 aaPredicted RBP16.05■□□□□ 0.16
GNE-202ENST00000396594 MYCP01106 439 aaPredicted RBP16.05■□□□□ 0.16
GNE-202ENST00000396594 ABHD2P08910 425 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 GRIK3Q13003 919 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 C1orf186Q6ZWK4 172 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 CLEC4FQ8N1N0 589 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 CARNMT1Q8N4J0 409 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 HTR3CQ8WXA8 447 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 ZNF558Q96NG5 402 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 RIC1Q4ADV7 1423 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.05■□□□□ 0.16
GNE-202ENST00000396594 SPATA31C2B4DYI2 1134 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 F8W810 466 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 AKAP10O43572 662 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 RAG1P15918 1043 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 PPP2R1BP30154 601 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 PPM1LQ5SGD2 360 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 ICE2Q659A1 982 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 P2RX7Q99572 595 aaKnown RBP16.05■□□□□ 0.16
GNE-202ENST00000396594 CYP4F11Q9HBI6 524 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 A1CFQ9NQ94 594 aaKnown RBP16.05■□□□□ 0.16
GNE-202ENST00000396594 KLHL28Q9NXS3 571 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 RCOR3Q9P2K3 495 aaPredicted RBP16.05■□□□□ 0.16
GNE-202ENST00000396594 COL14A1Q05707 1796 aaKnown RBP16.05■□□□□ 0.16
GNE-202ENST00000396594 FAM208AQ9UK61 1670 aaKnown RBP16.05■□□□□ 0.16
GNE-202ENST00000396594 SIGLEC16A6NMB1 481 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 MSH3P20585 1137 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 GUCY1A3Q02108 690 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 PAGE2BQ5JRK9 111 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 TATDN1Q6P1N9 297 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 ZNF571Q7Z3V5 609 aaPredicted RBP16.05■□□□□ 0.16
GNE-202ENST00000396594 TAS2R13Q9NYV9 303 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 RABGEF1Q9UJ41 708 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 TMCC3Q9ULS5 477 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 CRYL1Q9Y2S2 319 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 DTNAQ9Y4J8 743 aa16.05■□□□□ 0.16
GNE-202ENST00000396594 GRAP2O75791 330 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 VTNP04004 478 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 CD44P16070 742 aaKnown RBP16.04■□□□□ 0.16
GNE-202ENST00000396594 POLD2P49005 469 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 NDST1P52848 882 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 EFEMP1Q12805 493 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 GNA13Q14344 377 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 SLC30A10Q6XR72 485 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 DENND5BQ6ZUT9 1274 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 ACMSDQ8TDX5 336 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 CASKIN2Q8WXE0 1202 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 AURKCQ9UQB9 309 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 MICAL2O94851 1124 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 SERPINE1P05121 402 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 CXCL8P10145 99 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 VHLP40337 213 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 GRM5P41594 1212 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 PRIM2P49643 509 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 MARSP56192 900 aaKnown RBP16.04■□□□□ 0.16
GNE-202ENST00000396594 MAP3K7CLP57077 242 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 KLC1Q07866 573 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 NT5DC3Q86UY8 548 aa16.04■□□□□ 0.16
GNE-202ENST00000396594 P3H2Q8IVL5 708 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms