RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 MRPS5P82675 430 aaKnown RBP17.13■□□□□ 0.33
TRIM39-205ENST00000396551 TPSAB1Q15661 275 aa17.13■□□□□ 0.33
TRIM39-205ENST00000396551 C4orf22Q6V702 233 aa17.13■□□□□ 0.33
TRIM39-205ENST00000396551 AP5M1Q9H0R1 490 aa17.13■□□□□ 0.33
TRIM39-205ENST00000396551 MYO18AQ92614 2054 aaKnown RBP17.13■□□□□ 0.33
TRIM39-205ENST00000396551 MFSD11O43934 449 aa17.13■□□□□ 0.33
TRIM39-205ENST00000396551 NPR3P17342 541 aa17.13■□□□□ 0.33
TRIM39-205ENST00000396551 RABGGTBP53611 331 aa17.13■□□□□ 0.33
TRIM39-205ENST00000396551 PURAQ00577 322 aaKnown RBP17.13■□□□□ 0.33
TRIM39-205ENST00000396551 SEPT7Q16181 437 aaKnown RBP17.13■□□□□ 0.33
TRIM39-205ENST00000396551 DCAF6Q58WW2 860 aa17.13■□□□□ 0.33
TRIM39-205ENST00000396551 CLEC20AQ6ZU45 233 aa17.13■□□□□ 0.33
TRIM39-205ENST00000396551 CTAGE3PQ8IX95 158 aa17.13■□□□□ 0.33
TRIM39-205ENST00000396551 NT5C3BQ969T7 300 aa17.13■□□□□ 0.33
TRIM39-205ENST00000396551 VPS11Q9H270 941 aa17.13■□□□□ 0.33
TRIM39-205ENST00000396551 ARHGEF4Q9NR80 690 aa17.13■□□□□ 0.33
TRIM39-205ENST00000396551 MYADML2A6NDP7 307 aa17.13■□□□□ 0.33
TRIM39-205ENST00000396551 TRIM49D1C9J1S8 452 aa17.13■□□□□ 0.33
TRIM39-205ENST00000396551 GABRDO14764 452 aa17.13■□□□□ 0.33
TRIM39-205ENST00000396551 CCNB1P14635 433 aa17.13■□□□□ 0.33
TRIM39-205ENST00000396551 SEMA5AQ13591 1074 aa17.13■□□□□ 0.33
TRIM39-205ENST00000396551 SYPL2Q5VXT5 272 aa17.13■□□□□ 0.33
TRIM39-205ENST00000396551 HEATR6Q6AI08 1181 aaKnown RBP17.13■□□□□ 0.33
TRIM39-205ENST00000396551 HFE2Q6ZVN8 426 aa17.13■□□□□ 0.33
TRIM39-205ENST00000396551 KLHL29Q96CT2 875 aa17.13■□□□□ 0.33
TRIM39-205ENST00000396551 LGMNQ99538 433 aa17.13■□□□□ 0.33
TRIM39-205ENST00000396551 ARHGEF3Q9NR81 526 aa17.13■□□□□ 0.33
TRIM39-205ENST00000396551 ATP6V1G2O95670 118 aa17.12■□□□□ 0.33
TRIM39-205ENST00000396551 APOEP02649 317 aa17.12■□□□□ 0.33
TRIM39-205ENST00000396551 PLEKHG4Q58EX7 1191 aa17.12■□□□□ 0.33
TRIM39-205ENST00000396551 TTC39BQ5VTQ0 682 aaPredicted RBP17.12■□□□□ 0.33
TRIM39-205ENST00000396551 CST9Q5W186 159 aa17.12■□□□□ 0.33
TRIM39-205ENST00000396551 TRMT10BQ6PF06 316 aaKnown RBP17.12■□□□□ 0.33
TRIM39-205ENST00000396551 LRRC6Q86X45 466 aa17.12■□□□□ 0.33
TRIM39-205ENST00000396551 NME8Q8N427 588 aa17.12■□□□□ 0.33
TRIM39-205ENST00000396551 LRRC39Q96DD0 335 aa17.12■□□□□ 0.33
TRIM39-205ENST00000396551 ERP27Q96DN0 273 aa17.12■□□□□ 0.33
TRIM39-205ENST00000396551 FAM111AQ96PZ2 611 aa17.12■□□□□ 0.33
TRIM39-205ENST00000396551 NPY6RQ99463 290 aa17.12■□□□□ 0.33
TRIM39-205ENST00000396551 SYNJ2BP-COX16A0A087WUM0 186 aa17.12■□□□□ 0.33
TRIM39-205ENST00000396551 F5H423 210 aaPredicted RBP17.12■□□□□ 0.33
TRIM39-205ENST00000396551 TRDMT1O14717 391 aaKnown RBP17.12■□□□□ 0.33
TRIM39-205ENST00000396551 IGHA2P01877 340 aa17.12■□□□□ 0.33
TRIM39-205ENST00000396551 CSH1P0DML2 217 aa17.12■□□□□ 0.33
TRIM39-205ENST00000396551 CSH2P0DML3 217 aa17.12■□□□□ 0.33
TRIM39-205ENST00000396551 ARL4AP40617 200 aa17.12■□□□□ 0.33
TRIM39-205ENST00000396551 AFF1P51825 1210 aaKnown RBP17.12■□□□□ 0.33
TRIM39-205ENST00000396551 FSCN1Q16658 493 aaKnown RBP17.12■□□□□ 0.33
TRIM39-205ENST00000396551 MDH1BQ5I0G3 518 aa17.12■□□□□ 0.33
TRIM39-205ENST00000396551 CDHR3Q6ZTQ4 885 aa17.12■□□□□ 0.33
TRIM39-205ENST00000396551 RNF169Q8NCN4 708 aa17.12■□□□□ 0.33
TRIM39-205ENST00000396551 GSTCDQ8NEC7 633 aa17.12■□□□□ 0.33
TRIM39-205ENST00000396551 HTR3CQ8WXA8 447 aa17.12■□□□□ 0.33
TRIM39-205ENST00000396551 EBNA1BP2Q99848 306 aaKnown RBP17.12■□□□□ 0.33
TRIM39-205ENST00000396551 COX16Q9P0S2 106 aa17.12■□□□□ 0.33
TRIM39-205ENST00000396551 KANSL3Q9P2N6 904 aa17.12■□□□□ 0.33
TRIM39-205ENST00000396551 ZNF180Q9UJW8 692 aa17.12■□□□□ 0.33
TRIM39-205ENST00000396551 KRT16P08779 473 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 ANKRD20A2Q5SQ80 823 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 ANKRD20A1Q5TYW2 823 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 ANKRD20A3Q5VUR7 823 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 DENND5BQ6ZUT9 1274 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 TFB1MQ8WVM0 346 aaKnown RBP17.11■□□□□ 0.33
TRIM39-205ENST00000396551 KCTD13Q8WZ19 329 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 KATNAL1Q9BW62 490 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 MANSC1Q9H8J5 431 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 NPHS2Q9NP85 383 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 CRTAC1Q9NQ79 661 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 CHUKO15111 745 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 TOMM70O94826 608 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 UNC5CO95185 931 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 NOS2P35228 1153 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 RCOR3Q9P2K3 495 aaPredicted RBP17.11■□□□□ 0.33
TRIM39-205ENST00000396551 Q9Y3F1 56 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 MAD1L1Q9Y6D9 718 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 NRP1O14786 923 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 RARBP10826 455 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 SKIV2L2P42285 1042 aaKnown RBP17.11■□□□□ 0.33
TRIM39-205ENST00000396551 MAP3K7CLP57077 242 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 OVGP1Q12889 678 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 TAF1CQ15572 869 aaPredicted RBP17.11■□□□□ 0.33
TRIM39-205ENST00000396551 CHSY1Q86X52 802 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 RFWD2Q8NHY2 731 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 RNF139Q8WU17 664 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 SLC2A13Q96QE2 648 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 DNAI2Q9GZS0 605 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 NUMBLQ9Y6R0 609 aa17.11■□□□□ 0.33
TRIM39-205ENST00000396551 A0A0A0MRY4 1105 aa17.1■□□□□ 0.33
TRIM39-205ENST00000396551 FYNP06241 537 aa17.1■□□□□ 0.33
TRIM39-205ENST00000396551 PSEN1P49768 467 aa17.1■□□□□ 0.33
TRIM39-205ENST00000396551 BMPR2Q13873 1038 aa17.1■□□□□ 0.33
TRIM39-205ENST00000396551 NBPF20Q3BBV1 942 aa17.1■□□□□ 0.33
TRIM39-205ENST00000396551 SPATA13Q96N96 652 aa17.1■□□□□ 0.33
TRIM39-205ENST00000396551 NOD2Q9HC29 1040 aa17.1■□□□□ 0.33
TRIM39-205ENST00000396551 PIGVQ9NUD9 493 aa17.1■□□□□ 0.33
TRIM39-205ENST00000396551 MIOSQ9NXC5 875 aa17.1■□□□□ 0.33
TRIM39-205ENST00000396551 DNAH12Q6ZR08 3092 aa17.1■□□□□ 0.33
TRIM39-205ENST00000396551 CENPFP49454 3210 aa17.1■□□□□ 0.33
TRIM39-205ENST00000396551 FAM159BA6NKW6 160 aa17.1■□□□□ 0.33
TRIM39-205ENST00000396551 HACD1B0YJ81 288 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms