RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 BHMTQ93088 406 aa18.38■□□□□ 0.53
EXOSC3-202ENST00000396521 SLC6A17Q9H1V8 727 aa18.38■□□□□ 0.53
EXOSC3-202ENST00000396521 KCTD10Q9H3F6 313 aa18.38■□□□□ 0.53
EXOSC3-202ENST00000396521 TM7SF3Q9NS93 570 aa18.38■□□□□ 0.53
EXOSC3-202ENST00000396521 PLK2Q9NYY3 685 aa18.38■□□□□ 0.53
EXOSC3-202ENST00000396521 HMGXB4Q9UGU5 601 aa18.38■□□□□ 0.53
EXOSC3-202ENST00000396521 CALUO43852 315 aaPredicted RBP18.37■□□□□ 0.53
EXOSC3-202ENST00000396521 HLA-DRAP01903 254 aa18.37■□□□□ 0.53
EXOSC3-202ENST00000396521 C7P10643 843 aa18.37■□□□□ 0.53
EXOSC3-202ENST00000396521 IL12RB1P42701 662 aa18.37■□□□□ 0.53
EXOSC3-202ENST00000396521 ME1P48163 572 aa18.37■□□□□ 0.53
EXOSC3-202ENST00000396521 AFF3P51826 1226 aaKnown RBP18.37■□□□□ 0.53
EXOSC3-202ENST00000396521 SLC8A3P57103 927 aa18.37■□□□□ 0.53
EXOSC3-202ENST00000396521 DLG4P78352 724 aa18.37■□□□□ 0.53
EXOSC3-202ENST00000396521 STK4Q13043 487 aa18.37■□□□□ 0.53
EXOSC3-202ENST00000396521 ORC1Q13415 861 aa18.37■□□□□ 0.53
EXOSC3-202ENST00000396521 INTS8Q75QN2 995 aaKnown RBP18.37■□□□□ 0.53
EXOSC3-202ENST00000396521 SCD5Q86SK9 330 aa18.37■□□□□ 0.53
EXOSC3-202ENST00000396521 ZCCHC9Q8N567 271 aaKnown RBP18.37■□□□□ 0.53
EXOSC3-202ENST00000396521 ENGASEQ8NFI3 743 aa18.37■□□□□ 0.53
EXOSC3-202ENST00000396521 SETD7Q8WTS6 366 aaKnown RBP18.37■□□□□ 0.53
EXOSC3-202ENST00000396521 PIWIL1Q96J94 861 aaKnown RBP18.37■□□□□ 0.53
EXOSC3-202ENST00000396521 NIF3L1Q9GZT8 377 aa18.37■□□□□ 0.53
EXOSC3-202ENST00000396521 MIR1-1HGQ9H1L0 117 aa18.37■□□□□ 0.53
EXOSC3-202ENST00000396521 GAREM1Q9H706 876 aa18.37■□□□□ 0.53
EXOSC3-202ENST00000396521 FBRSQ9HAH7 460 aa18.37■□□□□ 0.53
EXOSC3-202ENST00000396521 OSGEPQ9NPF4 335 aa18.37■□□□□ 0.53
EXOSC3-202ENST00000396521 USP25Q9UHP3 1055 aa18.37■□□□□ 0.53
EXOSC3-202ENST00000396521 CFAP45Q9UL16 551 aa18.37■□□□□ 0.53
EXOSC3-202ENST00000396521 ACACAQ13085 2346 aa18.37■□□□□ 0.53
EXOSC3-202ENST00000396521 ITPR1Q14643 2758 aa18.36■□□□□ 0.53
EXOSC3-202ENST00000396521 K7ELQ4 463 aaPredicted RBP18.36■□□□□ 0.53
EXOSC3-202ENST00000396521 CILPO75339 1184 aa18.36■□□□□ 0.53
EXOSC3-202ENST00000396521 KLKB1P03952 638 aa18.36■□□□□ 0.53
EXOSC3-202ENST00000396521 CASP1P29466 404 aa18.36■□□□□ 0.53
EXOSC3-202ENST00000396521 VAMP7P51809 220 aa18.36■□□□□ 0.53
EXOSC3-202ENST00000396521 ARID5AQ03989 594 aa18.36■□□□□ 0.53
EXOSC3-202ENST00000396521 TEAD4Q15561 434 aa18.36■□□□□ 0.53
EXOSC3-202ENST00000396521 GEN1Q17RS7 908 aa18.36■□□□□ 0.53
EXOSC3-202ENST00000396521 DCAF12L1Q5VU92 463 aa18.36■□□□□ 0.53
EXOSC3-202ENST00000396521 TMPRSS7Q7RTY8 843 aa18.36■□□□□ 0.53
EXOSC3-202ENST00000396521 GALNT15Q8N3T1 639 aa18.36■□□□□ 0.53
EXOSC3-202ENST00000396521 PNPLA1Q8N8W4 532 aa18.36■□□□□ 0.53
EXOSC3-202ENST00000396521 SPRYD3Q8NCJ5 442 aa18.36■□□□□ 0.53
EXOSC3-202ENST00000396521 TRAF3IP3Q9Y228 551 aa18.36■□□□□ 0.53
EXOSC3-202ENST00000396521 MDM4O15151 490 aa18.35■□□□□ 0.53
EXOSC3-202ENST00000396521 CORO1AP31146 461 aaKnown RBP18.35■□□□□ 0.53
EXOSC3-202ENST00000396521 ZBTB16Q05516 673 aa18.35■□□□□ 0.53
EXOSC3-202ENST00000396521 ZNF234Q14588 700 aa18.35■□□□□ 0.53
EXOSC3-202ENST00000396521 NFIL3Q16649 462 aa18.35■□□□□ 0.53
EXOSC3-202ENST00000396521 HLA-BQ31612 363 aa18.35■□□□□ 0.53
EXOSC3-202ENST00000396521 CEP135Q66GS9 1140 aa18.35■□□□□ 0.53
EXOSC3-202ENST00000396521 SERPINA13PQ6UXR4 307 aa18.35■□□□□ 0.53
EXOSC3-202ENST00000396521 KIAA0895Q8NCT3 520 aa18.35■□□□□ 0.53
EXOSC3-202ENST00000396521 CCDC47Q96A33 483 aaKnown RBP18.35■□□□□ 0.53
EXOSC3-202ENST00000396521 JAKMIP2Q96AA8 810 aa18.35■□□□□ 0.53
EXOSC3-202ENST00000396521 PLD4Q96BZ4 506 aa18.35■□□□□ 0.53
EXOSC3-202ENST00000396521 CD93Q9NPY3 652 aa18.35■□□□□ 0.53
EXOSC3-202ENST00000396521 SCUBE2Q9NQ36 999 aa18.35■□□□□ 0.53
EXOSC3-202ENST00000396521 MARCH2Q9P0N8 246 aa18.35■□□□□ 0.53
EXOSC3-202ENST00000396521 NUDT5Q9UKK9 219 aa18.35■□□□□ 0.53
EXOSC3-202ENST00000396521 AGO1Q9UL18 857 aaKnown RBP18.35■□□□□ 0.53
EXOSC3-202ENST00000396521 PCDHA7Q9UN72 937 aa18.35■□□□□ 0.53
EXOSC3-202ENST00000396521 PLA2G4CQ9UP65 541 aa18.35■□□□□ 0.53
EXOSC3-202ENST00000396521 NBEAQ8NFP9 2946 aa18.35■□□□□ 0.53
EXOSC3-202ENST00000396521 CEP192Q8TEP8 1941 aa18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 KCNJ18B7U540 433 aa18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 KLRC4O43908 158 aa18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 DKK1O94907 266 aa18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 KRT13P13646 458 aa18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 RPL13P26373 211 aaKnown RBP18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 GTF2H1P32780 548 aa18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 EFEMP1Q12805 493 aa18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 CAMK2GQ13555 558 aaPredicted RBP18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 MPPE1Q53F39 396 aa18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 SPOPLQ6IQ16 392 aa18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 RSRC2Q7L4I2 434 aaKnown RBP18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 SLCO6A1Q86UG4 719 aa18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 PDZD3Q86UT5 571 aa18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 FAM217AQ8IXS0 508 aa18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 OR2T3Q8NH03 318 aa18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 C1orf216Q8TAB5 229 aa18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 BAHD1Q8TBE0 780 aaPredicted RBP18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 RHBDD1Q8TEB9 315 aa18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 WFIKKN2Q8TEU8 576 aa18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 DDI1Q8WTU0 396 aa18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 TWNKQ96RR1 684 aa18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 IRX2Q9BZI1 471 aaPredicted RBP18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 CIPCQ9C0C6 399 aa18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 OLA1Q9NTK5 396 aaKnown RBP18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 EIF2B4Q9UI10 523 aaKnown RBP18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 RASAL2Q9UJF2 1139 aa18.34■□□□□ 0.53
EXOSC3-202ENST00000396521 E9PAM4 449 aa18.33■□□□□ 0.52
EXOSC3-202ENST00000396521 DFNA5O60443 496 aa18.33■□□□□ 0.52
EXOSC3-202ENST00000396521 EPHX1P07099 455 aa18.33■□□□□ 0.52
EXOSC3-202ENST00000396521 HARS2P49590 506 aaKnown RBP18.33■□□□□ 0.52
EXOSC3-202ENST00000396521 COPAP53621 1224 aa18.33■□□□□ 0.52
EXOSC3-202ENST00000396521 KMT5BQ4FZB7 885 aa18.33■□□□□ 0.52
EXOSC3-202ENST00000396521 DENND1CQ8IV53 801 aa18.33■□□□□ 0.52
EXOSC3-202ENST00000396521 ZNF557Q8N988 423 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms