RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 RASAL2Q9UJF2 1139 aa21.2■□□□□ 0.98
VCPKMT-202ENST00000395860 ZNF840PA6NDX5 716 aa21.19■□□□□ 0.98
VCPKMT-202ENST00000395860 CLASP2O75122 1294 aaKnown RBP21.19■□□□□ 0.98
VCPKMT-202ENST00000395860 PHF2O75151 1096 aa21.19■□□□□ 0.98
VCPKMT-202ENST00000395860 TBX18O95935 607 aa21.19■□□□□ 0.98
VCPKMT-202ENST00000395860 RHOXF2BP0C7M4 288 aa21.19■□□□□ 0.98
VCPKMT-202ENST00000395860 CCR1P32246 355 aa21.19■□□□□ 0.98
VCPKMT-202ENST00000395860 PPP3CCP48454 512 aa21.19■□□□□ 0.98
VCPKMT-202ENST00000395860 ADCY2Q08462 1091 aa21.19■□□□□ 0.98
VCPKMT-202ENST00000395860 BRMS1LQ5PSV4 323 aa21.19■□□□□ 0.98
VCPKMT-202ENST00000395860 PPM1LQ5SGD2 360 aa21.19■□□□□ 0.98
VCPKMT-202ENST00000395860 C8orf74Q6P047 294 aa21.19■□□□□ 0.98
VCPKMT-202ENST00000395860 PYROXD2Q8N2H3 581 aa21.19■□□□□ 0.98
VCPKMT-202ENST00000395860 ZNF276Q8N554 614 aa21.19■□□□□ 0.98
VCPKMT-202ENST00000395860 RHOXF2Q9BQY4 288 aa21.19■□□□□ 0.98
VCPKMT-202ENST00000395860 ZNF670Q9BS34 389 aa21.19■□□□□ 0.98
VCPKMT-202ENST00000395860 MTMR10Q9NXD2 777 aa21.19■□□□□ 0.98
VCPKMT-202ENST00000395860 MARCH2Q9P0N8 246 aa21.19■□□□□ 0.98
VCPKMT-202ENST00000395860 TLR6Q9Y2C9 796 aa21.19■□□□□ 0.98
VCPKMT-202ENST00000395860 DENND4CQ5VZ89 1909 aa21.19■□□□□ 0.98
VCPKMT-202ENST00000395860 CST8O60676 142 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 C1RP00736 705 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 ARL4AP40617 200 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 DYNLT1P63172 113 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 ANKRD20A8PQ5CZ79 823 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 MAGOHBQ96A72 148 aaKnown RBP21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 RNF157Q96PX1 679 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 LMAN2LQ9H0V9 348 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 PLEKHA4Q9H4M7 779 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 ANLNQ9NQW6 1124 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 MAN1C1Q9NR34 630 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 ARHGEF38Q9NXL2 777 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 ZNF487B1APH4 448 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 IL4RP24394 825 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 TBX4P57082 545 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 NNTQ13423 1086 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 TFDP2Q14188 446 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 PPP2R5DQ14738 602 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 ELF2Q15723 593 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 CYP1B1Q16678 543 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 HECTD3Q5T447 861 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 RTL10Q7L3V2 364 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 MIB1Q86YT6 1006 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 C1orf54Q8WWF1 131 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 LRRC1Q9BTT6 524 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 NACA2Q9H009 215 aa21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 ZNF334Q9HCZ1 680 aaPredicted RBP21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.18■□□□□ 0.98
VCPKMT-202ENST00000395860 PER2O15055 1255 aa21.17■□□□□ 0.98
VCPKMT-202ENST00000395860 SLC2A3P11169 496 aa21.17■□□□□ 0.98
VCPKMT-202ENST00000395860 CHRNA3P32297 505 aa21.17■□□□□ 0.98
VCPKMT-202ENST00000395860 ATP5C1P36542 298 aaKnown RBP21.17■□□□□ 0.98
VCPKMT-202ENST00000395860 BBS12Q6ZW61 710 aa21.17■□□□□ 0.98
VCPKMT-202ENST00000395860 C12orf50Q8NA57 414 aaPredicted RBP21.17■□□□□ 0.98
VCPKMT-202ENST00000395860 GDPD5Q8WTR4 605 aa21.17■□□□□ 0.98
VCPKMT-202ENST00000395860 TSC1Q92574 1164 aa21.17■□□□□ 0.98
VCPKMT-202ENST00000395860 SLITRK6Q9H5Y7 841 aa21.17■□□□□ 0.98
VCPKMT-202ENST00000395860 HOMER3Q9NSC5 361 aa21.17■□□□□ 0.98
VCPKMT-202ENST00000395860 DNMT3LQ9UJW3 386 aa21.17■□□□□ 0.98
VCPKMT-202ENST00000395860 SLC12A8A0AV02 714 aa21.16■□□□□ 0.98
VCPKMT-202ENST00000395860 H3BRJ5 948 aa21.16■□□□□ 0.98
VCPKMT-202ENST00000395860 I6L893 689 aaPredicted RBP21.16■□□□□ 0.98
VCPKMT-202ENST00000395860 CCL16O15467 120 aa21.16■□□□□ 0.98
VCPKMT-202ENST00000395860 CREB3O43889 395 aa21.16■□□□□ 0.98
VCPKMT-202ENST00000395860 EPCAMP16422 314 aa21.16■□□□□ 0.98
VCPKMT-202ENST00000395860 TRIP4Q15650 581 aaPredicted RBP21.16■□□□□ 0.98
VCPKMT-202ENST00000395860 PABPC1LQ4VXU2 614 aaKnown RBP21.16■□□□□ 0.98
VCPKMT-202ENST00000395860 RBM23Q86U06 439 aaKnown RBP21.16■□□□□ 0.98
VCPKMT-202ENST00000395860 SLC22A17Q8WUG5 538 aa21.16■□□□□ 0.98
VCPKMT-202ENST00000395860 FAF2Q96CS3 445 aa21.16■□□□□ 0.98
VCPKMT-202ENST00000395860 SLC39A13Q96H72 371 aa21.16■□□□□ 0.98
VCPKMT-202ENST00000395860 DCLK3Q9C098 648 aa21.16■□□□□ 0.98
VCPKMT-202ENST00000395860 EPC1Q9H2F5 836 aa21.16■□□□□ 0.98
VCPKMT-202ENST00000395860 LRRC19Q9H756 370 aa21.16■□□□□ 0.98
VCPKMT-202ENST00000395860 CWC15Q9P013 229 aaKnown RBP21.16■□□□□ 0.98
VCPKMT-202ENST00000395860 RCOR3Q9P2K3 495 aaPredicted RBP21.16■□□□□ 0.98
VCPKMT-202ENST00000395860 R3HDM2Q9Y2K5 976 aaKnown RBP21.16■□□□□ 0.98
VCPKMT-202ENST00000395860 ZMYND10O75800 440 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 F11P03951 625 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 GOT1P17174 413 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 TUBP50607 506 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 SNX1Q13596 522 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 GLE1Q53GS7 698 aaKnown RBP21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 CCDC137Q6PK04 289 aaKnown RBP21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 GPR161Q8N6U8 529 aaKnown RBP21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 CCDC26Q8TAB7 109 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 ATG4AQ8WYN0 398 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 HAUS1Q96CS2 278 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 FCRL2Q96LA5 508 aaPredicted RBP21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 CSPG4P5Q96PW8 444 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 AMACRQ9UHK6 382 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 EEF2KO00418 725 aaKnown RBP21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 APOL1O14791 398 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 MOCS2O96007 188 aaPredicted RBP21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 APOEP02649 317 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 KPNA1P52294 538 aaPredicted RBP21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 MRPS25P82663 173 aaKnown RBP21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 CCNG2Q16589 344 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 KLHDC10Q6PID8 442 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms