RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 SMTNL2Q2TAL5 461 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 MGAT5BQ3V5L5 792 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 BOLA3Q53S33 107 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 TPGS2Q68CL5 300 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 SPATA31D4Q6ZUB0 917 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 FAM35AQ86V20 835 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 RELL1Q8IUW5 271 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 PPP2R3CQ969Q6 453 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 ARL8AQ96BM9 186 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 ZWILCHQ9H900 591 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 KRT82Q9NSB4 513 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 AFF4Q9UHB7 1163 aaKnown RBP15.72■□□□□ 0.11
SCAF11-204ENST00000395454 ASIC3Q9UHC3 531 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 SLC27A5Q9Y2P5 690 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 PATJQ8NI35 1801 aa15.71■□□□□ 0.11
SCAF11-204ENST00000395454 COL6A3P12111 3177 aa15.71■□□□□ 0.11
SCAF11-204ENST00000395454 GOLGA6CA6NDK9 693 aa15.71■□□□□ 0.11
SCAF11-204ENST00000395454 GOLGA6DP0CG33 693 aa15.71■□□□□ 0.11
SCAF11-204ENST00000395454 IGFBP4P22692 258 aa15.71■□□□□ 0.11
SCAF11-204ENST00000395454 ELF1P32519 619 aa15.71■□□□□ 0.11
SCAF11-204ENST00000395454 NRIP1P48552 1158 aa15.71■□□□□ 0.11
SCAF11-204ENST00000395454 PMS2P54278 862 aa15.71■□□□□ 0.11
SCAF11-204ENST00000395454 PDK2Q15119 407 aa15.71■□□□□ 0.11
SCAF11-204ENST00000395454 C15orf59Q2T9L4 293 aaPredicted RBP15.71■□□□□ 0.11
SCAF11-204ENST00000395454 KCNT1Q5JUK3 1230 aa15.71■□□□□ 0.11
SCAF11-204ENST00000395454 SH3PXD2AQ5TCZ1 1133 aa15.71■□□□□ 0.11
SCAF11-204ENST00000395454 KAZNQ674X7 775 aa15.71■□□□□ 0.11
SCAF11-204ENST00000395454 BNIPLQ7Z465 357 aa15.71■□□□□ 0.11
SCAF11-204ENST00000395454 TTC9BQ8N6N2 239 aa15.71■□□□□ 0.11
SCAF11-204ENST00000395454 SPPL2BQ8TCT7 592 aa15.71■□□□□ 0.11
SCAF11-204ENST00000395454 C2orf15Q8WU43 125 aaKnown RBP15.71■□□□□ 0.11
SCAF11-204ENST00000395454 SMARCD1Q96GM5 515 aa15.71■□□□□ 0.11
SCAF11-204ENST00000395454 FUBP3Q96I24 572 aaKnown RBP eCLIP15.71■□□□□ 0.11
SCAF11-204ENST00000395454 CCDC114Q96M63 670 aa15.71■□□□□ 0.11
SCAF11-204ENST00000395454 SEPT5Q99719 369 aaPredicted RBP15.71■□□□□ 0.11
SCAF11-204ENST00000395454 FOXP3Q9BZS1 431 aa15.71■□□□□ 0.11
SCAF11-204ENST00000395454 CRISPLD1Q9H336 500 aa15.71■□□□□ 0.11
SCAF11-204ENST00000395454 CYP4F11Q9HBI6 524 aa15.71■□□□□ 0.11
SCAF11-204ENST00000395454 TMBIM4Q9HC24 238 aa15.71■□□□□ 0.11
SCAF11-204ENST00000395454 GOLGA6AQ9NYA3 693 aa15.71■□□□□ 0.11
SCAF11-204ENST00000395454 PLXNA3P51805 1871 aa15.71■□□□□ 0.1
SCAF11-204ENST00000395454 APOC4-APOC2K7ER74 178 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 PIK3R2O00459 728 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 CLASP2O75122 1294 aaKnown RBP15.7■□□□□ 0.1
SCAF11-204ENST00000395454 AP1G2O75843 785 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 VNN2O95498 520 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 APOC2P02655 101 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 CD48P09326 243 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 FAM200BP0CF97 657 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 CLCN4P51793 760 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 GYS2P54840 703 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 HDAC4P56524 1084 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 ZFYVE27Q5T4F4 411 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 Q7L0L9 218 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 PIGZQ86VD9 579 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 FAF2Q96CS3 445 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 CFAP57Q96MR6 1250 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 DDX23Q9BUQ8 820 aaKnown RBP15.7■□□□□ 0.1
SCAF11-204ENST00000395454 TMEM109Q9BVC6 243 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 NSUN3Q9H649 340 aaKnown RBP15.7■□□□□ 0.1
SCAF11-204ENST00000395454 ATP8A1Q9Y2Q0 1164 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 HMGB1P1B2RPK0 211 aaPredicted RBP15.7■□□□□ 0.1
SCAF11-204ENST00000395454 PRRG1O14668 218 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 PRPSAP2O60256 369 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 CST8O60676 142 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 SOAT2O75908 522 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 GRIK1P39086 918 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 CACNA2D1P54289 1103 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 SLC8A3P57103 927 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 DPYSL3Q14195 570 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 EFHC1Q5JVL4 640 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 CLEC20AQ6ZU45 233 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 TRMT10CQ7L0Y3 403 aaKnown RBP15.7■□□□□ 0.1
SCAF11-204ENST00000395454 STRADAQ7RTN6 431 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 KCTD6Q8NC69 237 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 ACTL9Q8TC94 416 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 FAM172AQ8WUF8 416 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 UBLCP1Q8WVY7 318 aaPredicted RBP15.7■□□□□ 0.1
SCAF11-204ENST00000395454 NT5C3BQ969T7 300 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 KCNK16Q96T55 309 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 GAS2L1Q99501 681 aaPredicted RBP15.7■□□□□ 0.1
SCAF11-204ENST00000395454 PCDH9Q9HC56 1237 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 LMCD1Q9NZU5 365 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.7■□□□□ 0.1
SCAF11-204ENST00000395454 PCSK1NQ9UHG2 260 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 HCFC2Q9Y5Z7 792 aa15.7■□□□□ 0.1
SCAF11-204ENST00000395454 NDC80O14777 642 aa15.69■□□□□ 0.1
SCAF11-204ENST00000395454 GRAP2O75791 330 aa15.69■□□□□ 0.1
SCAF11-204ENST00000395454 BEST1O76090 585 aa15.69■□□□□ 0.1
SCAF11-204ENST00000395454 SEC24AO95486 1093 aa15.69■□□□□ 0.1
SCAF11-204ENST00000395454 DESP17661 470 aa15.69■□□□□ 0.1
SCAF11-204ENST00000395454 MAP3K7CLP57077 242 aa15.69■□□□□ 0.1
SCAF11-204ENST00000395454 ADGRE1Q14246 886 aa15.69■□□□□ 0.1
SCAF11-204ENST00000395454 RAB6CQ53S08 254 aa15.69■□□□□ 0.1
SCAF11-204ENST00000395454 HIBCHQ6NVY1 386 aaPredicted RBP15.69■□□□□ 0.1
SCAF11-204ENST00000395454 SCN4BQ8IWT1 228 aa15.69■□□□□ 0.1
SCAF11-204ENST00000395454 FAM76AQ8TAV0 307 aa15.69■□□□□ 0.1
SCAF11-204ENST00000395454 ATP6V1G3Q96LB4 118 aa15.69■□□□□ 0.1
SCAF11-204ENST00000395454 RAB6CQ9H0N0 254 aa15.69■□□□□ 0.1
SCAF11-204ENST00000395454 IGFLR1Q9H665 355 aa15.69■□□□□ 0.1
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