RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 TRAPPC9Q96Q05 1148 aa21.33■■□□□ 1.01
CLK3-202ENST00000395066 ZNF184Q99676 751 aaPredicted RBP21.33■■□□□ 1.01
CLK3-202ENST00000395066 CEP41Q9BYV8 373 aa21.33■■□□□ 1.01
CLK3-202ENST00000395066 DHX35Q9H5Z1 703 aaKnown RBP21.33■■□□□ 1.01
CLK3-202ENST00000395066 KRT82Q9NSB4 513 aa21.33■■□□□ 1.01
CLK3-202ENST00000395066 A0A0G2JMZ2 1700 aa21.33■■□□□ 1.01
CLK3-202ENST00000395066 LRRC37A2A6NM11 1700 aa21.33■■□□□ 1.01
CLK3-202ENST00000395066 DCAF8L1A6NGE4 600 aa21.33■■□□□ 1
CLK3-202ENST00000395066 PAPSS1O43252 624 aaPredicted RBP21.33■■□□□ 1
CLK3-202ENST00000395066 IL1BP01584 269 aa21.33■■□□□ 1
CLK3-202ENST00000395066 UBAP2LQ14157 1087 aaKnown RBP21.33■■□□□ 1
CLK3-202ENST00000395066 TEX44Q53QW1 395 aa21.33■■□□□ 1
CLK3-202ENST00000395066 FAM91A1Q658Y4 838 aa21.33■■□□□ 1
CLK3-202ENST00000395066 RBM15BQ8NDT2 890 aaKnown RBP21.33■■□□□ 1
CLK3-202ENST00000395066 SIGLEC10Q96LC7 697 aa21.33■■□□□ 1
CLK3-202ENST00000395066 CYP3A43Q9HB55 503 aa21.33■■□□□ 1
CLK3-202ENST00000395066 PRMT7Q9NVM4 692 aaPredicted RBP21.33■■□□□ 1
CLK3-202ENST00000395066 PTPRFP10586 1907 aa21.33■■□□□ 1
CLK3-202ENST00000395066 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.32■■□□□ 1
CLK3-202ENST00000395066 E2F8A0AVK6 867 aa21.32■■□□□ 1
CLK3-202ENST00000395066 LYPLA1O75608 230 aaPredicted RBP21.32■■□□□ 1
CLK3-202ENST00000395066 F7P08709 466 aaPredicted RBP21.32■■□□□ 1
CLK3-202ENST00000395066 RAP1GDS1P52306 607 aa21.32■■□□□ 1
CLK3-202ENST00000395066 FOXB2Q5VYV0 432 aa21.32■■□□□ 1
CLK3-202ENST00000395066 SLC9A4Q6AI14 798 aa21.32■■□□□ 1
CLK3-202ENST00000395066 KBTBD2Q8IY47 623 aa21.32■■□□□ 1
CLK3-202ENST00000395066 KIF12Q96FN5 646 aa21.32■■□□□ 1
CLK3-202ENST00000395066 SMARCAD1Q9H4L7 1026 aa21.32■■□□□ 1
CLK3-202ENST00000395066 NRDE2Q9H7Z3 1164 aa21.32■■□□□ 1
CLK3-202ENST00000395066 ELP3Q9H9T3 547 aa21.32■■□□□ 1
CLK3-202ENST00000395066 SNX9Q9Y5X1 595 aa21.32■■□□□ 1
CLK3-202ENST00000395066 ANKRD33BA6NCL7 494 aa21.32■■□□□ 1
CLK3-202ENST00000395066 MEI4A8MW99 385 aa21.32■■□□□ 1
CLK3-202ENST00000395066 HBP1O60381 514 aa21.32■■□□□ 1
CLK3-202ENST00000395066 PHKA2P46019 1235 aa21.32■■□□□ 1
CLK3-202ENST00000395066 DENND5BQ6ZUT9 1274 aa21.32■■□□□ 1
CLK3-202ENST00000395066 MOB2Q70IA6 237 aa21.32■■□□□ 1
CLK3-202ENST00000395066 C7orf31Q8N865 590 aa21.32■■□□□ 1
CLK3-202ENST00000395066 RTP4Q96DX8 246 aa21.32■■□□□ 1
CLK3-202ENST00000395066 CLMNQ96JQ2 1002 aa21.32■■□□□ 1
CLK3-202ENST00000395066 GINS2Q9Y248 185 aa21.32■■□□□ 1
CLK3-202ENST00000395066 ZNF286BP0CG31 522 aa21.31■■□□□ 1
CLK3-202ENST00000395066 P4HA1P13674 534 aa21.31■■□□□ 1
CLK3-202ENST00000395066 TGM2P21980 687 aa21.31■■□□□ 1
CLK3-202ENST00000395066 INCA1Q0VD86 236 aa21.31■■□□□ 1
CLK3-202ENST00000395066 BSPRYQ5W0U4 402 aa21.31■■□□□ 1
CLK3-202ENST00000395066 ADGRF2Q8IZF7 708 aa21.31■■□□□ 1
CLK3-202ENST00000395066 PYROXD2Q8N2H3 581 aa21.31■■□□□ 1
CLK3-202ENST00000395066 DPEP3Q9H4B8 488 aa21.31■■□□□ 1
CLK3-202ENST00000395066 ETAA1Q9NY74 926 aa21.31■■□□□ 1
CLK3-202ENST00000395066 ANGPTL2Q9UKU9 493 aa21.31■■□□□ 1
CLK3-202ENST00000395066 BCLAF3A2AJT9 711 aaKnown RBP21.31■■□□□ 1
CLK3-202ENST00000395066 MAGEC1O60732 1142 aa21.31■■□□□ 1
CLK3-202ENST00000395066 ATICP31939 592 aa21.31■■□□□ 1
CLK3-202ENST00000395066 PDK2Q15119 407 aa21.31■■□□□ 1
CLK3-202ENST00000395066 BOLA3Q53S33 107 aa21.31■■□□□ 1
CLK3-202ENST00000395066 GLRA4Q5JXX5 417 aa21.31■■□□□ 1
CLK3-202ENST00000395066 CASC4Q6P4E1 433 aa21.31■■□□□ 1
CLK3-202ENST00000395066 KCNT2Q6UVM3 1135 aa21.31■■□□□ 1
CLK3-202ENST00000395066 SLC25A41Q8N5S1 370 aa21.31■■□□□ 1
CLK3-202ENST00000395066 DEPDC1BQ8WUY9 529 aa21.31■■□□□ 1
CLK3-202ENST00000395066 RILPQ96NA2 401 aa21.31■■□□□ 1
CLK3-202ENST00000395066 SIRPGQ9P1W8 387 aa21.31■■□□□ 1
CLK3-202ENST00000395066 KLHL33A6NCF5 533 aa21.3■■□□□ 1
CLK3-202ENST00000395066 CAPN14A8MX76 684 aa21.3■■□□□ 1
CLK3-202ENST00000395066 PRR5-ARHGAP8B1AHC4 643 aa21.3■■□□□ 1
CLK3-202ENST00000395066 KLF11O14901 512 aa21.3■■□□□ 1
CLK3-202ENST00000395066 MCF2P10911 925 aa21.3■■□□□ 1
CLK3-202ENST00000395066 ARHGAP8P85298 464 aa21.3■■□□□ 1
CLK3-202ENST00000395066 TMPRSS6Q8IU80 811 aa21.3■■□□□ 1
CLK3-202ENST00000395066 ZNF180Q9UJW8 692 aa21.3■■□□□ 1
CLK3-202ENST00000395066 WDR27A2RRH5 827 aa21.3■■□□□ 1
CLK3-202ENST00000395066 ITM2AO43736 263 aa21.3■■□□□ 1
CLK3-202ENST00000395066 SLC6A3Q01959 620 aa21.3■■□□□ 1
CLK3-202ENST00000395066 CCDC185Q8N715 623 aa21.3■■□□□ 1
CLK3-202ENST00000395066 GSDMBQ8TAX9 411 aa21.3■■□□□ 1
CLK3-202ENST00000395066 NLRP7Q8WX94 980 aa21.3■■□□□ 1
CLK3-202ENST00000395066 EBNA1BP2Q99848 306 aaKnown RBP21.3■■□□□ 1
CLK3-202ENST00000395066 VRTNQ9H8Y1 702 aa21.3■■□□□ 1
CLK3-202ENST00000395066 TMPRSS4Q9NRS4 437 aa21.3■■□□□ 1
CLK3-202ENST00000395066 KCNK4Q9NYG8 393 aa21.3■■□□□ 1
CLK3-202ENST00000395066 ADM5C9JUS6 153 aa21.29■■□□□ 1
CLK3-202ENST00000395066 F8W8V4 182 aa21.29■■□□□ 1
CLK3-202ENST00000395066 CCNFP41002 786 aa21.29■■□□□ 1
CLK3-202ENST00000395066 POLE2P56282 527 aa21.29■■□□□ 1
CLK3-202ENST00000395066 TMEM62Q0P6H9 643 aa21.29■■□□□ 1
CLK3-202ENST00000395066 GSTA3Q16772 222 aa21.29■■□□□ 1
CLK3-202ENST00000395066 MTHFD1LQ6UB35 978 aa21.29■■□□□ 1
CLK3-202ENST00000395066 SMC1BQ8NDV3 1235 aa21.29■■□□□ 1
CLK3-202ENST00000395066 STKLD1Q8NE28 680 aa21.29■■□□□ 1
CLK3-202ENST00000395066 NDRG1Q92597 394 aaKnown RBP21.29■■□□□ 1
CLK3-202ENST00000395066 C7orf26Q96N11 449 aa21.29■■□□□ 1
CLK3-202ENST00000395066 THTPAQ9BU02 230 aa21.29■■□□□ 1
CLK3-202ENST00000395066 APOL6Q9BWW8 343 aa21.29■■□□□ 1
CLK3-202ENST00000395066 TRIM4Q9C037 500 aa21.29■■□□□ 1
CLK3-202ENST00000395066 ASB7Q9H672 318 aa21.29■■□□□ 1
CLK3-202ENST00000395066 GPRC5DQ9NZD1 345 aa21.29■■□□□ 1
CLK3-202ENST00000395066 HBS1LQ9Y450 684 aaKnown RBP21.29■■□□□ 1
CLK3-202ENST00000395066 HES2Q9Y543 173 aa21.29■■□□□ 1
CLK3-202ENST00000395066 PPME1Q9Y570 386 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms