RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 ZNF280DQ6N043 979 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 DEFB128Q7Z7B8 93 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 TMEM173Q86WV6 379 aaPredicted RBP15.51■□□□□ 0.07
CCT4-201ENST00000394440 LRRC43Q8N309 656 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 SH2D3CQ8N5H7 860 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 NAT8LQ8N9F0 302 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 C8orf48Q96LL4 319 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 OLFM3Q96PB7 478 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 TRIM62Q9BVG3 475 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 DNAJC17Q9NVM6 304 aaKnown RBP15.51■□□□□ 0.07
CCT4-201ENST00000394440 DDIT4Q9NX09 232 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 ABI2Q9NYB9 513 aaPredicted RBP15.51■□□□□ 0.07
CCT4-201ENST00000394440 NINJ2Q9NZG7 142 aa15.51■□□□□ 0.07
CCT4-201ENST00000394440 GOLGA6L10A6NI86 522 aa15.5■□□□□ 0.07
CCT4-201ENST00000394440 EFEMP2O95967 443 aa15.5■□□□□ 0.07
CCT4-201ENST00000394440 MAGEA11P43364 429 aa15.5■□□□□ 0.07
CCT4-201ENST00000394440 DPYSQ14117 519 aa15.5■□□□□ 0.07
CCT4-201ENST00000394440 AGBL2Q5U5Z8 902 aa15.5■□□□□ 0.07
CCT4-201ENST00000394440 EMC10Q5UCC4 262 aa15.5■□□□□ 0.07
CCT4-201ENST00000394440 KCTD16Q68DU8 428 aa15.5■□□□□ 0.07
CCT4-201ENST00000394440 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.5■□□□□ 0.073e-9■■■■■ 39.2
CCT4-201ENST00000394440 CEP128Q6ZU80 1094 aa15.5■□□□□ 0.07
CCT4-201ENST00000394440 B4GALNT4Q76KP1 1039 aa15.5■□□□□ 0.07
CCT4-201ENST00000394440 TAC4Q86UU9 113 aa15.5■□□□□ 0.07
CCT4-201ENST00000394440 HOOK3Q86VS8 718 aa15.5■□□□□ 0.07
CCT4-201ENST00000394440 PPIL6Q8IXY8 311 aa15.5■□□□□ 0.07
CCT4-201ENST00000394440 DQX1Q8TE96 717 aaKnown RBP15.5■□□□□ 0.07
CCT4-201ENST00000394440 BCL7CQ8WUZ0 217 aaPredicted RBP15.5■□□□□ 0.07
CCT4-201ENST00000394440 PHACTR1Q9C0D0 580 aa15.5■□□□□ 0.07
CCT4-201ENST00000394440 DTLQ9NZJ0 730 aa15.5■□□□□ 0.07
CCT4-201ENST00000394440 H3BRJ5 948 aa15.5■□□□□ 0.07
CCT4-201ENST00000394440 RBL1P28749 1068 aa15.5■□□□□ 0.07
CCT4-201ENST00000394440 ELAVL2Q12926 359 aaKnown RBP15.5■□□□□ 0.07
CCT4-201ENST00000394440 KRT71Q3SY84 523 aa15.5■□□□□ 0.07
CCT4-201ENST00000394440 B3GALT6Q96L58 329 aa15.5■□□□□ 0.07
CCT4-201ENST00000394440 RBM15Q96T37 977 aaKnown RBP eCLIP15.5■□□□□ 0.07
CCT4-201ENST00000394440 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.5■□□□□ 0.07
CCT4-201ENST00000394440 MFHAS1Q9Y4C4 1052 aa15.5■□□□□ 0.07
CCT4-201ENST00000394440 MAP3K6O95382 1288 aa15.49■□□□□ 0.07
CCT4-201ENST00000394440 PBX3P40426 434 aa15.49■□□□□ 0.07
CCT4-201ENST00000394440 IFFO1Q0D2I5 559 aa15.49■□□□□ 0.07
CCT4-201ENST00000394440 RTP2Q5QGT7 225 aa15.49■□□□□ 0.07
CCT4-201ENST00000394440 ANKRD22Q5VYY1 191 aa15.49■□□□□ 0.07
CCT4-201ENST00000394440 CNKSR3Q6P9H4 555 aa15.49■□□□□ 0.07
CCT4-201ENST00000394440 SCD5Q86SK9 330 aa15.49■□□□□ 0.07
CCT4-201ENST00000394440 CEP57Q86XR8 500 aa15.49■□□□□ 0.07
CCT4-201ENST00000394440 ARMC5Q96C12 935 aa15.49■□□□□ 0.07
CCT4-201ENST00000394440 PCDHB5Q9Y5E4 795 aa15.49■□□□□ 0.07
CCT4-201ENST00000394440 NT5C1B-RDH14C9J2C7 533 aa15.49■□□□□ 0.07
CCT4-201ENST00000394440 SMAPO00193 183 aa15.49■□□□□ 0.07
CCT4-201ENST00000394440 TRIM66O15016 1216 aa15.49■□□□□ 0.07
CCT4-201ENST00000394440 PGFP49763 221 aa15.49■□□□□ 0.07
CCT4-201ENST00000394440 YWHAGP61981 247 aaKnown RBP eCLIP15.49■□□□□ 0.07
CCT4-201ENST00000394440 KYNUQ16719 465 aa15.49■□□□□ 0.07
CCT4-201ENST00000394440 SLC45A4Q5BKX6 768 aa15.49■□□□□ 0.07
CCT4-201ENST00000394440 CDKL3Q8IVW4 592 aaPredicted RBP15.49■□□□□ 0.07
CCT4-201ENST00000394440 SCN4BQ8IWT1 228 aa15.49■□□□□ 0.07
CCT4-201ENST00000394440 QKIQ96PU8 341 aaKnown RBP eCLIP15.49■□□□□ 0.072e-13■■□□□ 11.4
CCT4-201ENST00000394440 ABCC13Q9NSE7 274 aa15.49■□□□□ 0.07
CCT4-201ENST00000394440 FAM72CH0Y354 149 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 DCLK1O15075 740 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 KCNN4O15554 427 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 MFSD11O43934 449 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 DGKIO75912 1065 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 TMEM63AO94886 807 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 GJA8P48165 433 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 HCAR3P49019 387 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 PAFAH1B3Q15102 231 aaKnown RBP15.48■□□□□ 0.07
CCT4-201ENST00000394440 FAM72AQ5TYM5 149 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 FAM72DQ6L9T8 149 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 RSPO2Q6UXX9 243 aaPredicted RBP15.48■□□□□ 0.07
CCT4-201ENST00000394440 RFX8Q6ZV50 586 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 FAM72BQ86X60 149 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 HOMEZQ8IX15 550 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 ANKLE1Q8NAG6 615 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 IL37Q9NZH6 218 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 PAK5Q9P286 719 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 ATP11BQ9Y2G3 1177 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 IRAK2O43187 625 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 VNN2O95498 520 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 ACSL3O95573 720 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 MAGEA4P43358 317 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 GPR15P49685 360 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 GAD2Q05329 585 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 GPR17Q13304 367 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 KCNT2Q6UVM3 1135 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 RNF168Q8IYW5 571 aaPredicted RBP15.48■□□□□ 0.07
CCT4-201ENST00000394440 TTC9BQ8N6N2 239 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 UHMK1Q8TAS1 419 aaKnown RBP15.48■□□□□ 0.07
CCT4-201ENST00000394440 TLCD1Q96CP7 247 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 PGM2Q96G03 612 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 SMOC2Q9H3U7 446 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 CWH43Q9H720 699 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 NMUR1Q9HB89 426 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 SCML2Q9UQR0 700 aa15.48■□□□□ 0.07
CCT4-201ENST00000394440 TCRBV7S3A2A0A539 114 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 FAM92AA1XBS5 289 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 MTMR11A4FU01 709 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 E7ESA3 106 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 EEF2KO00418 725 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms