RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 ARHGEF4Q9NR80 690 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 KRT82Q9NSB4 513 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 ZNF180Q9UJW8 692 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 SLC12A4Q9UP95 1085 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 STARD13Q9Y3M8 1113 aa14.8□□□□□ -0.04
MKS1-203ENST00000393120 M0QYT0 321 aa14.79□□□□□ -0.04
MKS1-203ENST00000393120 ADAMTS4O75173 837 aa14.79□□□□□ -0.04
MKS1-203ENST00000393120 DNAJC8O75937 253 aaPredicted RBP14.79□□□□□ -0.04
MKS1-203ENST00000393120 FDFT1P37268 417 aa14.79□□□□□ -0.04
MKS1-203ENST00000393120 MAP3K7CLP57077 242 aa14.79□□□□□ -0.04
MKS1-203ENST00000393120 DAOAP59103 153 aa14.79□□□□□ -0.04
MKS1-203ENST00000393120 YWHAGP61981 247 aaKnown RBP eCLIP14.79□□□□□ -0.04
MKS1-203ENST00000393120 SCAPQ12770 1279 aa14.79□□□□□ -0.04
MKS1-203ENST00000393120 UPP1Q16831 310 aa14.79□□□□□ -0.04
MKS1-203ENST00000393120 SPRED3Q2MJR0 410 aa14.79□□□□□ -0.04
MKS1-203ENST00000393120 KBTBD12Q3ZCT8 623 aa14.79□□□□□ -0.04
MKS1-203ENST00000393120 DSTYKQ6XUX3 929 aa14.79□□□□□ -0.04
MKS1-203ENST00000393120 CYS1Q717R9 158 aa14.79□□□□□ -0.04
MKS1-203ENST00000393120 FAM35AQ86V20 835 aa14.79□□□□□ -0.04
MKS1-203ENST00000393120 PACS2Q86VP3 889 aa14.79□□□□□ -0.04
MKS1-203ENST00000393120 PYROXD2Q8N2H3 581 aa14.79□□□□□ -0.04
MKS1-203ENST00000393120 GBP7Q8N8V2 638 aaPredicted RBP14.79□□□□□ -0.04
MKS1-203ENST00000393120 RNF139Q8WU17 664 aa14.79□□□□□ -0.04
MKS1-203ENST00000393120 HTR3CQ8WXA8 447 aa14.79□□□□□ -0.04
MKS1-203ENST00000393120 APBB2Q92870 758 aa14.79□□□□□ -0.04
MKS1-203ENST00000393120 MRRFQ96E11 262 aaKnown RBP14.79□□□□□ -0.04
MKS1-203ENST00000393120 PITPNM3Q9BZ71 974 aa14.79□□□□□ -0.04
MKS1-203ENST00000393120 AGO3Q9H9G7 860 aaKnown RBP14.79□□□□□ -0.04
MKS1-203ENST00000393120 RRN3Q9NYV6 651 aa14.79□□□□□ -0.04
MKS1-203ENST00000393120 ZC3H7BQ9UGR2 993 aaKnown RBP14.79□□□□□ -0.04
MKS1-203ENST00000393120 IKBKGQ9Y6K9 419 aa14.79□□□□□ -0.04
MKS1-203ENST00000393120 A0A0A0MRY4 1105 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 MYBPHLA2RUH7 354 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 AP1G2O75843 785 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 MAP3K6O95382 1288 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 FYNP06241 537 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 MLNP12872 115 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 PCSK1P29120 753 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 HCAR3P49019 387 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 GLUD2P49448 558 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 AFF1P51825 1210 aaKnown RBP14.78□□□□□ -0.04
MKS1-203ENST00000393120 DEUP1Q05D60 604 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 DSC3Q14574 896 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 PAFAH1B3Q15102 231 aaKnown RBP14.78□□□□□ -0.04
MKS1-203ENST00000393120 PRKD1Q15139 912 aaPredicted RBP14.78□□□□□ -0.04
MKS1-203ENST00000393120 SLC1A5Q15758 541 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 SYPL2Q5VXT5 272 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 RNF43Q68DV7 783 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 CGB2Q6NT52 195 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 SH2D5Q6ZV89 423 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 SLC26A11Q86WA9 606 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 PCED1BQ96HM7 432 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 SIGLEC10Q96LC7 697 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 SPATA13Q96N96 652 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 CSNK1G1Q9HCP0 422 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 HAUS2Q9NVX0 235 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 TTLL3Q9Y4R7 772 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 RAD54BQ9Y620 910 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 H0YHG0 523 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 NRP1O14786 923 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 MT-ND3P03897 115 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 INHBAP08476 426 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 ADRA1BP35368 520 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 PITX1P78337 314 aaPredicted RBP14.78□□□□□ -0.04
MKS1-203ENST00000393120 SARNPP82979 210 aaKnown RBP14.78□□□□□ -0.04
MKS1-203ENST00000393120 SLC18A2Q05940 514 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 MTM1Q13496 603 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 DPYSQ14117 519 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 PDK1Q15118 436 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 GALNTL6Q49A17 601 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 FAXCQ5TGI0 409 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 HHATQ5VTY9 493 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 ZNF534Q76KX8 674 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 SCML4Q8N228 414 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 C3orf58Q8NDZ4 430 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 KLHDC9Q8NEP7 349 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 ZMIZ2Q8NF64 920 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 LPPQ93052 612 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 EBNA1BP2Q99848 306 aaKnown RBP14.78□□□□□ -0.04
MKS1-203ENST00000393120 PAIP2Q9BPZ3 127 aaKnown RBP14.78□□□□□ -0.04
MKS1-203ENST00000393120 FERMT1Q9BQL6 677 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 ULBP1Q9BZM6 244 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 PLAC1Q9HBJ0 212 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 EIF2B3Q9NR50 452 aaKnown RBP14.78□□□□□ -0.04
MKS1-203ENST00000393120 TLL2Q9Y6L7 1015 aa14.78□□□□□ -0.04
MKS1-203ENST00000393120 A0A0U1RQF3 1178 aa14.77□□□□□ -0.04
MKS1-203ENST00000393120 HHLA1C9JL84 531 aa14.77□□□□□ -0.04
MKS1-203ENST00000393120 OPHN1O60890 802 aa14.77□□□□□ -0.04
MKS1-203ENST00000393120 STK10O94804 968 aaKnown RBP14.77□□□□□ -0.04
MKS1-203ENST00000393120 CYP11A1P05108 521 aa14.77□□□□□ -0.04
MKS1-203ENST00000393120 CTSHP09668 335 aa14.77□□□□□ -0.04
MKS1-203ENST00000393120 CST5P28325 142 aaPredicted RBP14.77□□□□□ -0.04
MKS1-203ENST00000393120 FLT3LGP49771 235 aa14.77□□□□□ -0.04
MKS1-203ENST00000393120 SCNN1GP51170 649 aa14.77□□□□□ -0.04
MKS1-203ENST00000393120 ZNF135P52742 658 aaPredicted RBP14.77□□□□□ -0.04
MKS1-203ENST00000393120 PTK7Q13308 1070 aa14.77□□□□□ -0.04
MKS1-203ENST00000393120 ANKRD20A2Q5SQ80 823 aa14.77□□□□□ -0.04
MKS1-203ENST00000393120 ANKRD20A1Q5TYW2 823 aa14.77□□□□□ -0.04
MKS1-203ENST00000393120 ANKRD20A3Q5VUR7 823 aa14.77□□□□□ -0.04
MKS1-203ENST00000393120 CCSAPQ6IQ19 270 aaPredicted RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms