RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 NOS2P35228 1153 aa12.99□□□□□ -0.33
CLTC-202ENST00000393043 CDK16Q00536 496 aa12.99□□□□□ -0.33
CLTC-202ENST00000393043 KCNT2Q6UVM3 1135 aa12.99□□□□□ -0.33
CLTC-202ENST00000393043 EDEM1Q92611 657 aa12.99□□□□□ -0.33
CLTC-202ENST00000393043 OTUB1Q96FW1 271 aaPredicted RBP12.99□□□□□ -0.33
CLTC-202ENST00000393043 SIKE1Q9BRV8 207 aa12.99□□□□□ -0.33
CLTC-202ENST00000393043 WWOXQ9NZC7 414 aa12.99□□□□□ -0.33
CLTC-202ENST00000393043 TIMM13Q9Y5L4 95 aaPredicted RBP12.99□□□□□ -0.33
CLTC-202ENST00000393043 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.99□□□□□ -0.33
CLTC-202ENST00000393043 SRRM3A6NNA2 597 aaPredicted RBP12.99□□□□□ -0.33
CLTC-202ENST00000393043 SLURP2P0DP57 97 aa12.99□□□□□ -0.33
CLTC-202ENST00000393043 ACADSP16219 412 aa12.99□□□□□ -0.33
CLTC-202ENST00000393043 PAX3P23760 479 aa12.99□□□□□ -0.33
CLTC-202ENST00000393043 SSTR1P30872 391 aa12.99□□□□□ -0.33
CLTC-202ENST00000393043 TBX4P57082 545 aa12.99□□□□□ -0.33
CLTC-202ENST00000393043 MRPS35P82673 323 aaKnown RBP12.99□□□□□ -0.33
CLTC-202ENST00000393043 FOXD4Q12950 439 aaPredicted RBP12.99□□□□□ -0.33
CLTC-202ENST00000393043 POLNQ7Z5Q5 900 aa12.99□□□□□ -0.33
CLTC-202ENST00000393043 SLC22A9Q8IVM8 553 aa12.99□□□□□ -0.33
CLTC-202ENST00000393043 SOX13Q9UN79 622 aa12.99□□□□□ -0.33
CLTC-202ENST00000393043 SLC15A5A6NIM6 579 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 RNF103O00237 685 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 CYP2C18P33260 490 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 HSPA13P48723 471 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 BMPR2Q13873 1038 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 LRRC23Q53EV4 343 aaPredicted RBP12.98□□□□□ -0.33
CLTC-202ENST00000393043 TTC30AQ86WT1 665 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 ZNF333Q96JL9 665 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 PRPF18Q99633 342 aaKnown RBP12.98□□□□□ -0.33
CLTC-202ENST00000393043 CPNE1Q99829 537 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 XPNPEP3Q9NQH7 507 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 BLOC1S6Q9UL45 172 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 AFDNP55196 1824 aaKnown RBP12.98□□□□□ -0.33
CLTC-202ENST00000393043 CHADO15335 359 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 HNRNPRO43390 633 aaKnown RBP12.98□□□□□ -0.33
CLTC-202ENST00000393043 LTFP02788 710 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 ATP5BP06576 529 aaKnown RBP12.98□□□□□ -0.33
CLTC-202ENST00000393043 TSHRP16473 764 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 PTPN4P29074 926 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 NOMO3P69849 1222 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 RASA2Q15283 850 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 LRRC36Q1X8D7 754 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 RRM2BQ7LG56 351 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 FAM9CQ8IZT9 166 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 TCP10LQ8TDR4 215 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 CENPTQ96BT3 561 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 LBHD1Q9BQE6 289 aaPredicted RBP12.98□□□□□ -0.33
CLTC-202ENST00000393043 EMILIN2Q9BXX0 1053 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 GPAMQ9HCL2 828 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 DLG5Q8TDM6 1919 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 ERI2A8K979 691 aaKnown RBP12.98□□□□□ -0.33
CLTC-202ENST00000393043 DGKIO75912 1065 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 UBOX5O94941 541 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 SERPINF2P08697 491 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 ITGALP20701 1170 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 CD151P48509 253 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 IFI35P80217 286 aaPredicted RBP12.98□□□□□ -0.33
CLTC-202ENST00000393043 CYTH1Q15438 398 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 MTDHQ86UE4 582 aaKnown RBP12.98□□□□□ -0.33
CLTC-202ENST00000393043 TUBGCP3Q96CW5 907 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 TSPAN18Q96SJ8 248 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 FZD1Q9UP38 647 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 REXO2Q9Y3B8 237 aaKnown RBP12.98□□□□□ -0.33
CLTC-202ENST00000393043 EVPLLA8MZ36 301 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 RAMP2O60895 175 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 RTN3O95197 1032 aaPredicted RBP12.98□□□□□ -0.33
CLTC-202ENST00000393043 GJB6O95452 261 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 SERPINE1P05121 402 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 NFICP08651 508 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 EPHB3P54753 998 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 UGCGQ16739 394 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 PDPK2PQ6A1A2 396 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 TMEM139Q8IV31 216 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 KLRG1Q96E93 195 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 EIF3LQ9Y262 564 aaKnown RBP12.98□□□□□ -0.33
CLTC-202ENST00000393043 ACTL7BQ9Y614 415 aa12.98□□□□□ -0.33
CLTC-202ENST00000393043 IGKV6D-41A0A0C4DH26 115 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 C5orf58C9J3I9 102 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 CKMP06732 381 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 KCNA3P22001 575 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 INHBEP58166 350 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 SCUBE1Q8IWY4 988 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 TAGAPQ8N103 731 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 WNT8BQ93098 351 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 SENP8Q96LD8 212 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 PURBQ96QR8 312 aaKnown RBP12.97□□□□□ -0.33
CLTC-202ENST00000393043 SNCAIPQ9Y6H5 919 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 LIASO43766 372 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 SKAP2O75563 359 aaPredicted RBP12.97□□□□□ -0.33
CLTC-202ENST00000393043 SLC45A4Q5BKX6 768 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 CLEC4FQ8N1N0 589 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 PRELID2Q8N945 189 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 MRPL9Q9BYD2 267 aaKnown RBP12.97□□□□□ -0.33
CLTC-202ENST00000393043 ST6GALNAC4Q9H4F1 302 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 DCLRE1BQ9H816 532 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 COG4Q9H9E3 785 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 ACP6Q9NPH0 428 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 FAM32AQ9Y421 112 aaKnown RBP12.97□□□□□ -0.33
CLTC-202ENST00000393043 ALADP13716 330 aa12.97□□□□□ -0.33
CLTC-202ENST00000393043 TCN1P20061 433 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms