RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 MGAT1P26572 445 aa17.06■□□□□ 0.32
SCN3B-202ENST00000392770 PEX19P40855 299 aa17.06■□□□□ 0.32
SCN3B-202ENST00000392770 GLRBP48167 497 aa17.06■□□□□ 0.32
SCN3B-202ENST00000392770 RRP1BQ14684 758 aaKnown RBP17.06■□□□□ 0.32
SCN3B-202ENST00000392770 SENP6Q9GZR1 1112 aaPredicted RBP17.06■□□□□ 0.32
SCN3B-202ENST00000392770 RNF112Q9ULX5 631 aa17.06■□□□□ 0.32
SCN3B-202ENST00000392770 TTLL13PA6NNM8 815 aa17.06■□□□□ 0.32
SCN3B-202ENST00000392770 AIM2O14862 343 aa17.06■□□□□ 0.32
SCN3B-202ENST00000392770 PRKAR2AP13861 404 aaKnown RBP17.06■□□□□ 0.32
SCN3B-202ENST00000392770 PGAM1P18669 254 aa17.06■□□□□ 0.32
SCN3B-202ENST00000392770 MARCKSL1P49006 195 aa17.06■□□□□ 0.32
SCN3B-202ENST00000392770 PLD1Q13393 1074 aa17.06■□□□□ 0.32
SCN3B-202ENST00000392770 DAB2IPQ5VWQ8 1189 aa17.06■□□□□ 0.32
SCN3B-202ENST00000392770 KAT2BQ92831 832 aa17.06■□□□□ 0.32
SCN3B-202ENST00000392770 BRD8Q9H0E9 1235 aa17.06■□□□□ 0.32
SCN3B-202ENST00000392770 ZMYM2Q9UBW7 1377 aa17.06■□□□□ 0.32
SCN3B-202ENST00000392770 SOWAHBA6NEL2 793 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 OPLAHO14841 1288 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 CRTAMO95727 393 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 ZSCAN5DPP0CG00 497 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 CKBP12277 381 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 RBL1P28749 1068 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 KCNT2Q6UVM3 1135 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 MRPL45Q9BRJ2 306 aaKnown RBP17.05■□□□□ 0.32
SCN3B-202ENST00000392770 KDM4CQ9H3R0 1056 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 CD52P31358 61 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 ARL2P36404 184 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 DPYSL3Q14195 570 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 ITIH4Q14624 930 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 MARC1Q5VT66 337 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 CMTM5Q96DZ9 223 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 RNF208Q9H0X6 261 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 ABCC13Q9NSE7 274 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 AHDC1Q5TGY3 1603 aaPredicted RBP17.05■□□□□ 0.32
SCN3B-202ENST00000392770 KLRG2A4D1S0 409 aaPredicted RBP17.05■□□□□ 0.32
SCN3B-202ENST00000392770 SOAT2O75908 522 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 PDHA1P08559 390 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 OR1E1P30953 314 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 TSHZ1Q6ZSZ6 1077 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 TMC7Q7Z402 723 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 ZSWIM2Q8NEG5 633 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 C18orf25Q96B23 403 aaPredicted RBP17.05■□□□□ 0.32
SCN3B-202ENST00000392770 NSL1Q96IY1 281 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 KREMEN1Q96MU8 473 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 HEATR9A2RTY3 570 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 DGKIO75912 1065 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 NOS2P35228 1153 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 POU6F1Q14863 301 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 NBPF20Q3BBV1 942 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 AARS2Q5JTZ9 985 aaKnown RBP17.05■□□□□ 0.32
SCN3B-202ENST00000392770 NOL9Q5SY16 702 aaKnown RBP17.05■□□□□ 0.32
SCN3B-202ENST00000392770 HELQQ8TDG4 1101 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 CDH9Q9ULB4 789 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 A0A0B4J269 797 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 SMIM35A0A1B0GVV1 85 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 MSCO60682 206 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 RAMP2O60895 175 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 SASH3O75995 380 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 MGAT5Q09328 741 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 FBXW10Q5XX13 1052 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.05■□□□□ 0.32
SCN3B-202ENST00000392770 ICA1LQ8NDH6 482 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 IPPQ9Y573 584 aa17.05■□□□□ 0.32
SCN3B-202ENST00000392770 B2RBV5 119 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 HDAC4P56524 1084 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 ATP13A4Q4VNC1 1196 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 ZCCHC9Q8N567 271 aaKnown RBP17.04■□□□□ 0.32
SCN3B-202ENST00000392770 CENPKQ9BS16 269 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 RNPEPQ9H4A4 650 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 NXF3Q9H4D5 531 aaKnown RBP17.04■□□□□ 0.32
SCN3B-202ENST00000392770 AURKCQ9UQB9 309 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 RNF103-CHMP3A0A140T963 221 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 TRPC5OSA6NMA1 111 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 RBAK-RBAKDNI3L0D1 243 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 TM9SF1O15321 606 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 PTPN7P35236 360 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 PDCD2Q16342 344 aaPredicted RBP17.04■□□□□ 0.32
SCN3B-202ENST00000392770 TRIML2Q8N7C3 387 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 WNT8BQ93098 351 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 HES6Q96HZ4 224 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 THTPAQ9BU02 230 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 NUDT5Q9UKK9 219 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 MAGEB16A2A368 324 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 NOL4O94818 638 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 TNFRSF8P28908 595 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 SCNN1BP51168 640 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 POU4F1Q01851 419 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 CDH17Q12864 832 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 PTAR1Q7Z6K3 402 aaPredicted RBP17.04■□□□□ 0.32
SCN3B-202ENST00000392770 C12orf29Q8N999 325 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 TBL1YQ9BQ87 522 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 ILKAPQ9H0C8 392 aaPredicted RBP17.04■□□□□ 0.32
SCN3B-202ENST00000392770 TRHDEQ9UKU6 1024 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 NCF1BA6NI72 391 aaPredicted RBP17.04■□□□□ 0.32
SCN3B-202ENST00000392770 NCF1CA8MVU1 366 aaPredicted RBP17.04■□□□□ 0.32
SCN3B-202ENST00000392770 NCF1P14598 390 aaPredicted RBP17.04■□□□□ 0.32
SCN3B-202ENST00000392770 RAG1P15918 1043 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 TARSP26639 723 aaKnown RBP17.04■□□□□ 0.32
SCN3B-202ENST00000392770 SSTR1P30872 391 aa17.04■□□□□ 0.32
SCN3B-202ENST00000392770 MPP3Q13368 585 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms