RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 CPXM1Q96SM3 734 aa19.67■□□□□ 0.74
CCDC50-202ENST00000392456 DCLRE1BQ9H816 532 aa19.67■□□□□ 0.74
CCDC50-202ENST00000392456 UVRAGQ9P2Y5 699 aa19.67■□□□□ 0.74
CCDC50-202ENST00000392456 AMFRQ9UKV5 643 aa19.67■□□□□ 0.74
CCDC50-202ENST00000392456 A8MXQ7 604 aa19.67■□□□□ 0.74
CCDC50-202ENST00000392456 C9IYK1 514 aa19.67■□□□□ 0.74
CCDC50-202ENST00000392456 B4GALT3O60512 393 aa19.67■□□□□ 0.74
CCDC50-202ENST00000392456 LSM8O95777 96 aaKnown RBP19.67■□□□□ 0.74
CCDC50-202ENST00000392456 LMNAP02545 664 aaKnown RBP19.67■□□□□ 0.74
CCDC50-202ENST00000392456 UBTFL6P0CB48 400 aaPredicted RBP19.67■□□□□ 0.74
CCDC50-202ENST00000392456 MARK2Q7KZI7 788 aaKnown RBP19.67■□□□□ 0.74
CCDC50-202ENST00000392456 LIMS2Q7Z4I7 341 aa19.67■□□□□ 0.74
CCDC50-202ENST00000392456 OSTM1Q86WC4 334 aa19.67■□□□□ 0.74
CCDC50-202ENST00000392456 HACE1Q8IYU2 909 aa19.67■□□□□ 0.74
CCDC50-202ENST00000392456 AGGF1Q8N302 714 aaeCLIP19.67■□□□□ 0.74
CCDC50-202ENST00000392456 LRRC4CQ9HCJ2 640 aa19.67■□□□□ 0.74
CCDC50-202ENST00000392456 AVENQ9NQS1 362 aaPredicted RBP19.67■□□□□ 0.74
CCDC50-202ENST00000392456 RGS18Q9NS28 235 aa19.67■□□□□ 0.74
CCDC50-202ENST00000392456 IL1RAPL1Q9NZN1 696 aa19.67■□□□□ 0.74
CCDC50-202ENST00000392456 TIMM13Q9Y5L4 95 aaPredicted RBP19.67■□□□□ 0.74
CCDC50-202ENST00000392456 PIK3R2O00459 728 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 GPD2P43304 727 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 C1QBPQ07021 282 aaKnown RBP19.66■□□□□ 0.74
CCDC50-202ENST00000392456 CNGA2Q16280 664 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 SGO2Q562F6 1265 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 PLEKHA7Q6IQ23 1121 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 DBF4BQ8NFT6 615 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 SCLYQ96I15 445 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 ZNF560Q96MR9 790 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 CGREF1Q99674 301 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 SH3GL1Q99961 368 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 LRMDAQ9H2I8 198 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 TSPAN16Q9UKR8 245 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 I3L4J1 428 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 M0QYV0 167 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 PODXLO00592 558 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 PFKMP08237 780 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 GNL1P36915 607 aaPredicted RBP19.66■□□□□ 0.74
CCDC50-202ENST00000392456 HLTFQ14527 1009 aaKnown RBP eCLIP19.66■□□□□ 0.74
CCDC50-202ENST00000392456 SNX30Q5VWJ9 437 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 WSCD1Q658N2 575 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 C11orf63Q6NUN7 778 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 AADACL2Q6P093 401 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 RIBC1Q8N443 379 aaPredicted RBP19.66■□□□□ 0.74
CCDC50-202ENST00000392456 APPL2Q8NEU8 664 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 LRRC8CQ8TDW0 803 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 UBLCP1Q8WVY7 318 aaPredicted RBP19.66■□□□□ 0.74
CCDC50-202ENST00000392456 PRMT1Q99873 361 aaKnown RBP19.66■□□□□ 0.74
CCDC50-202ENST00000392456 CENPOQ9BU64 300 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 LHX5Q9H2C1 402 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 TTLL3Q9Y4R7 772 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 FADS3Q9Y5Q0 445 aa19.66■□□□□ 0.74
CCDC50-202ENST00000392456 TCRBV5S1A1TA0A578 114 aa19.65■□□□□ 0.74
CCDC50-202ENST00000392456 CYB561D2O14569 222 aa19.65■□□□□ 0.74
CCDC50-202ENST00000392456 ZCCHC18P0CG32 403 aa19.65■□□□□ 0.74
CCDC50-202ENST00000392456 PNPLA4P41247 253 aa19.65■□□□□ 0.74
CCDC50-202ENST00000392456 SERPINB8P50452 374 aa19.65■□□□□ 0.74
CCDC50-202ENST00000392456 KCTD19Q17RG1 926 aaPredicted RBP19.65■□□□□ 0.74
CCDC50-202ENST00000392456 TREML1Q86YW5 311 aa19.65■□□□□ 0.74
CCDC50-202ENST00000392456 VCPIP1Q96JH7 1222 aa19.65■□□□□ 0.74
CCDC50-202ENST00000392456 FAM32AQ9Y421 112 aaKnown RBP19.65■□□□□ 0.74
CCDC50-202ENST00000392456 RAD51CO43502 376 aa19.65■□□□□ 0.74
CCDC50-202ENST00000392456 MED7O43513 233 aa19.65■□□□□ 0.74
CCDC50-202ENST00000392456 DMPKQ09013 629 aa19.65■□□□□ 0.74
CCDC50-202ENST00000392456 ZNF211Q13398 564 aaPredicted RBP19.65■□□□□ 0.74
CCDC50-202ENST00000392456 UPP1Q16831 310 aa19.65■□□□□ 0.74
CCDC50-202ENST00000392456 CCDC153Q494R4 210 aa19.65■□□□□ 0.74
CCDC50-202ENST00000392456 SV2CQ496J9 727 aa19.65■□□□□ 0.74
CCDC50-202ENST00000392456 PDCD4Q53EL6 469 aaKnown RBP19.65■□□□□ 0.74
CCDC50-202ENST00000392456 TTC30AQ86WT1 665 aa19.65■□□□□ 0.74
CCDC50-202ENST00000392456 UHMK1Q8TAS1 419 aaKnown RBP19.65■□□□□ 0.74
CCDC50-202ENST00000392456 HASPINQ8TF76 798 aa19.65■□□□□ 0.74
CCDC50-202ENST00000392456 NRG4Q8WWG1 115 aa19.65■□□□□ 0.74
CCDC50-202ENST00000392456 SELENOSQ9BQE4 189 aa19.65■□□□□ 0.74
CCDC50-202ENST00000392456 ZNF518BQ9C0D4 1074 aa19.65■□□□□ 0.74
CCDC50-202ENST00000392456 INTS9Q9NV88 658 aaKnown RBP19.65■□□□□ 0.74
CCDC50-202ENST00000392456 SLC38A7Q9NVC3 462 aa19.65■□□□□ 0.74
CCDC50-202ENST00000392456 PTTG2Q9NZH5 202 aa19.65■□□□□ 0.74
CCDC50-202ENST00000392456 ARL2BPQ9Y2Y0 163 aa19.65■□□□□ 0.74
CCDC50-202ENST00000392456 ACAT1P24752 427 aaKnown RBP19.64■□□□□ 0.74
CCDC50-202ENST00000392456 CCL23P55773 120 aa19.64■□□□□ 0.74
CCDC50-202ENST00000392456 CLLU1OSQ5K130 101 aa19.64■□□□□ 0.74
CCDC50-202ENST00000392456 LIN9Q5TKA1 542 aa19.64■□□□□ 0.74
CCDC50-202ENST00000392456 SLC39A5Q6ZMH5 540 aa19.64■□□□□ 0.74
CCDC50-202ENST00000392456 SLC24A5Q71RS6 500 aa19.64■□□□□ 0.74
CCDC50-202ENST00000392456 ADGRF2Q8IZF7 708 aa19.64■□□□□ 0.74
CCDC50-202ENST00000392456 CD101Q93033 1021 aa19.64■□□□□ 0.74
CCDC50-202ENST00000392456 DNAJC1Q96KC8 554 aaKnown RBP19.64■□□□□ 0.74
CCDC50-202ENST00000392456 TDRKHQ9Y2W6 561 aaKnown RBP19.64■□□□□ 0.74
CCDC50-202ENST00000392456 DYTNA2CJ06 578 aa19.64■□□□□ 0.73
CCDC50-202ENST00000392456 HUS1O60921 280 aa19.64■□□□□ 0.73
CCDC50-202ENST00000392456 ERBB2P04626 1255 aa19.64■□□□□ 0.73
CCDC50-202ENST00000392456 ITGB1P05556 798 aa19.64■□□□□ 0.73
CCDC50-202ENST00000392456 CCDC130P13994 396 aa19.64■□□□□ 0.73
CCDC50-202ENST00000392456 CUL1Q13616 776 aa19.64■□□□□ 0.73
CCDC50-202ENST00000392456 CYLC2Q14093 348 aaPredicted RBP19.64■□□□□ 0.73
CCDC50-202ENST00000392456 KIAA0319Q5VV43 1072 aa19.64■□□□□ 0.73
CCDC50-202ENST00000392456 LCLAT1Q6UWP7 414 aa19.64■□□□□ 0.73
CCDC50-202ENST00000392456 CD300LGQ6UXG3 332 aa19.64■□□□□ 0.73
CCDC50-202ENST00000392456 SENP8Q96LD8 212 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms