RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 SRRM1Q8IYB3 904 aaKnown RBP3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 OR52L2PQ8NGH6 319 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 OSR1Q8TAX0 266 aaPredicted RBP3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 FAM71BQ8TC56 605 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 PNISRQ8TF01 805 aaKnown RBP3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 STYXQ8WUJ0 223 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 WDR60Q8WVS4 1066 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 POF1BQ8WVV4 589 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 KAZALD1Q96I82 304 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 RNF26Q9BY78 433 aaPredicted RBP3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 OBP2BQ9NPH6 170 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 FSCN3Q9NQT6 498 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 PDGFCQ9NRA1 345 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 ABHD10Q9NUJ1 306 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 UBE2J1Q9Y385 318 aaPredicted RBP3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 ARHGEF17Q96PE2 2063 aaPredicted RBP3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 WDR17Q8IZU2 1322 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 CCDC187A0A096LP49 1063 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 GXYLT2A0PJZ3 443 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 CGB1A6NKQ9 187 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 LGALS16A8MUM7 142 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 TTC34A8MYJ7 566 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 DSCR3O14972 297 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 CTIFO43310 598 aaKnown RBP3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 DHHO43323 396 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 TAF5LO75529 589 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 ALADP13716 330 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 ATF7P17544 494 aaPredicted RBP3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 CHAF1AQ13111 956 aaPredicted RBP3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 BIRC2Q13490 618 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 PTK2BQ14289 1009 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 GRM4Q14833 912 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 KPNB1Q14974 876 aaKnown RBP3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 PUM3Q15397 648 aaKnown RBP3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 ELF2Q15723 593 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 SRSF7Q16629 238 aaKnown RBP eCLIP3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 PFKFB3Q16875 520 aaPredicted RBP3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 TRIM71Q2Q1W2 868 aaKnown RBP3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 ZACNQ401N2 412 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 CEP78Q5JTW2 689 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 COLEC12Q5KU26 742 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 RINT1Q6NUQ1 792 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 MSANTD2Q6P1R3 559 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 ACSM6Q6P461 480 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 YTHDF3Q7Z739 585 aaKnown RBP3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 NRSN1Q8IZ57 195 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 GALNT16Q8N428 558 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 AKAP1Q92667 903 aaKnown RBP eCLIP3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 RPS6KC1Q96S38 1066 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 FAM118BQ9BPY3 351 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 SH2D3AQ9BRG2 576 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 NUAK2Q9H093 628 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 TP63Q9H3D4 680 aaPredicted RBP3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 NRIP3Q9NQ35 241 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 ARL8BQ9NVJ2 186 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 LRFN1Q9P244 771 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 NFU1Q9UMS0 254 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 COMMD10Q9Y6G5 202 aa3.54□□□□□ -1.84
RNU6-550P-201ENST00000391057 SYT5O00445 386 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 FCHO1O14526 889 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 DNPH1O43598 174 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 TNFRSF6BO95407 300 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 PRR35P0CG20 571 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 KLRK1P26718 216 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 TACR3P29371 465 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 PDIA3P30101 505 aaKnown RBP3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 SLC8A1P32418 973 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 ARHGAP25P42331 645 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 VPS41P49754 854 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 BLMHQ13867 455 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 PFKFB4Q16877 469 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 SLC18B1Q6NT16 456 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 NEK8Q86SG6 692 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 CNGA4Q8IV77 575 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 ENAHQ8N8S7 591 aaPredicted RBP3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 ATG16L2Q8NAA4 619 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 ZNF398Q8TD17 642 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 SLC22A17Q8WUG5 538 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 GLMPQ8WWB7 406 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 LTV1Q96GA3 475 aaPredicted RBP3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 FAR2Q96K12 515 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 PAAF1Q9BRP4 392 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 QTRT1Q9BXR0 403 aaKnown RBP3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 CDCP1Q9H5V8 836 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 ASNSD1Q9NWL6 643 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 SEMA5BQ9P283 1151 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 KLHL13Q9P2N7 655 aa3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 SCAF8Q9UPN6 1271 aaKnown RBP3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 HEMK1Q9Y5R4 338 aaPredicted RBP3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 SIRT4Q9Y6E7 314 aaPredicted RBP3.53□□□□□ -1.84
RNU6-550P-201ENST00000391057 SMIM35A0A1B0GVV1 85 aa3.52□□□□□ -1.85
RNU6-550P-201ENST00000391057 M0QZQ0 153 aa3.52□□□□□ -1.85
RNU6-550P-201ENST00000391057 TRIM38O00635 465 aa3.52□□□□□ -1.85
RNU6-550P-201ENST00000391057 PEX14O75381 377 aa3.52□□□□□ -1.85
RNU6-550P-201ENST00000391057 RPP40O75818 363 aaKnown RBP3.52□□□□□ -1.85
RNU6-550P-201ENST00000391057 CER1O95813 267 aa3.52□□□□□ -1.85
RNU6-550P-201ENST00000391057 CSTBP04080 98 aaKnown RBP3.52□□□□□ -1.85
RNU6-550P-201ENST00000391057 ITGA2BP08514 1039 aa3.52□□□□□ -1.85
RNU6-550P-201ENST00000391057 KELP23276 732 aa3.52□□□□□ -1.85
RNU6-550P-201ENST00000391057 NDUFS1P28331 727 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms