RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 BNC1Q01954 994 aa-0.04□□□□□ -2.42
TRAJ53-201ENST00000390485 GPR18Q14330 331 aa-0.04□□□□□ -2.42
TRAJ53-201ENST00000390485 KPNB1Q14974 876 aaKnown RBP-0.04□□□□□ -2.42
TRAJ53-201ENST00000390485 MFSD13AQ14CX5 517 aa-0.04□□□□□ -2.42
TRAJ53-201ENST00000390485 TERF2Q15554 542 aa-0.04□□□□□ -2.42
TRAJ53-201ENST00000390485 ANO4Q32M45 955 aa-0.04□□□□□ -2.42
TRAJ53-201ENST00000390485 ZC3H12BQ5HYM0 836 aaKnown RBP-0.04□□□□□ -2.42
TRAJ53-201ENST00000390485 ARHGAP40Q5TG30 622 aa-0.04□□□□□ -2.42
TRAJ53-201ENST00000390485 RGS7BPQ6MZT1 257 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ53-201ENST00000390485 TUBA1AQ71U36 451 aa-0.04□□□□□ -2.42
TRAJ53-201ENST00000390485 FJX1Q86VR8 437 aa-0.04□□□□□ -2.42
TRAJ53-201ENST00000390485 METTL16Q86W50 562 aaKnown RBP-0.04□□□□□ -2.42
TRAJ53-201ENST00000390485 MARCH9Q86YJ5 346 aa-0.04□□□□□ -2.42
TRAJ53-201ENST00000390485 PARP8Q8N3A8 854 aa-0.04□□□□□ -2.42
TRAJ53-201ENST00000390485 HCAR2Q8TDS4 363 aa-0.04□□□□□ -2.42
TRAJ53-201ENST00000390485 CTHRC1Q96CG8 243 aa-0.04□□□□□ -2.42
TRAJ53-201ENST00000390485 EAF2Q96CJ1 260 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ53-201ENST00000390485 ZNF653Q96CK0 615 aa-0.04□□□□□ -2.42
TRAJ53-201ENST00000390485 RAX2Q96IS3 184 aa-0.04□□□□□ -2.42
TRAJ53-201ENST00000390485 ZNF668Q96K58 619 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ53-201ENST00000390485 POM121L2Q96KW2 1035 aa-0.04□□□□□ -2.42
TRAJ53-201ENST00000390485 PRDM8Q9NQV8 689 aa-0.04□□□□□ -2.42
TRAJ53-201ENST00000390485 SNX15Q9NRS6 342 aa-0.04□□□□□ -2.42
TRAJ53-201ENST00000390485 LPAR3Q9UBY5 353 aa-0.04□□□□□ -2.42
TRAJ53-201ENST00000390485 FAM171A2A8MVW0 826 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 I6L893 689 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 KDM1AO60341 852 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 KCNJ13O60928 360 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 PRKD3O94806 890 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 KIF20AO95235 890 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 WNT1P04628 370 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 SSBP05455 408 aaKnown RBP eCLIP-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 CSF1RP07333 972 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 MARK3P27448 753 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 CCR10P46092 362 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 LOXL3P58215 753 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 GAD2Q05329 585 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 SREBF2Q12772 1141 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 MALLQ13021 153 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 FSCN1Q16658 493 aaKnown RBP-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 UGT8Q16880 541 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 TTC39AQ5SRH9 613 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 DENND2CQ68D51 928 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 HIST2H2BDQ6DRA6 164 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 TICAM1Q8IUC6 712 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 ADGRF4Q8IZF3 695 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 OR2I1PQ8NGU4 316 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 OR14A16Q8NHC5 309 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 GABPB2Q8TAK5 448 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 IFI44Q8TCB0 444 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 NEK9Q8TD19 979 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 ZNF473Q8WTR7 871 aaKnown RBP-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 PIGKQ92643 395 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 MOCOSQ96EN8 888 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 MFSD3Q96ES6 412 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 EDC3Q96F86 508 aaKnown RBP-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 PUS7Q96PZ0 661 aaKnown RBP-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 SIK2Q9H0K1 926 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 GZF1Q9H116 711 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 FBRSL1Q9HCM7 1045 aaKnown RBP-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 DIAPH3Q9NSV4 1193 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 RLIMQ9NVW2 624 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 EPB41L3Q9Y2J2 1087 aaPredicted RBP-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 FER1L4A9Z1Z3 1794 aa-0.05□□□□□ -2.42
TRAJ53-201ENST00000390485 SPATA31A1Q5TZJ5 1347 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 PRSS29PA6NIE9 313 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 C16orf96A6NNT2 1141 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 PMS2P5A8MQ11 134 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 CLGNO14967 610 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 DCLK1O15075 740 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 VNN1O95497 513 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 IGLV1-44P01699 117 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 ASLP04424 464 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 PATE4P0C8F1 98 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 ERCC3P19447 782 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 POU3F2P20265 443 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 KCNA3P22001 575 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 PDE6CP51160 858 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 ZNF135P52742 658 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 ZP1P60852 638 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 CCT2P78371 535 aaKnown RBP-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 E2F2Q14209 437 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 LY6KQ17RY6 165 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 MUM1Q2TAK8 710 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 FSCBQ5H9T9 825 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 ISM2Q6H9L7 571 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 RETSATQ6NUM9 610 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 UNQ6126/PRO20091Q6UXV3 157 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 SLC16A12Q6ZSM3 486 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 GPSM1Q86YR5 675 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 IZUMO1Q8IYV9 350 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 ABRAQ8N0Z2 381 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 CHTF18Q8WVB6 975 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 OSCP1Q8WVF1 389 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 SECTM1Q8WVN6 248 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 HNRNPLLQ8WVV9 542 aaKnown RBP-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 WDR24Q96S15 920 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 ADI1Q9BV57 179 aa-0.06□□□□□ -2.42
TRAJ53-201ENST00000390485 RTN4RQ9BZR6 473 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms