RNA–Protein interactions for RNA: ENST00000389675.6

MRPL28-202, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL28, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-202ENST00000389675 Q6ZNB5 142 aa16.96■□□□□ 0.31
MRPL28-202ENST00000389675 PHF13Q86YI8 300 aaPredicted RBP16.96■□□□□ 0.31
MRPL28-202ENST00000389675 OR8K1Q8NGG5 319 aa16.96■□□□□ 0.31
MRPL28-202ENST00000389675 RNF34Q969K3 372 aa16.96■□□□□ 0.31
MRPL28-202ENST00000389675 SYT11Q9BT88 431 aa16.96■□□□□ 0.31
MRPL28-202ENST00000389675 DDX23Q9BUQ8 820 aaKnown RBP16.96■□□□□ 0.31
MRPL28-202ENST00000389675 LTB4R2Q9NPC1 389 aa16.96■□□□□ 0.31
MRPL28-202ENST00000389675 SPHK2Q9NRA0 654 aa16.96■□□□□ 0.31
MRPL28-202ENST00000389675 METTL5Q9NRN9 209 aaKnown RBP16.96■□□□□ 0.31
MRPL28-202ENST00000389675 DDIT4Q9NX09 232 aa16.96■□□□□ 0.31
MRPL28-202ENST00000389675 AGO1Q9UL18 857 aaKnown RBP16.96■□□□□ 0.31
MRPL28-202ENST00000389675 STAP1Q9ULZ2 295 aa16.96■□□□□ 0.31
MRPL28-202ENST00000389675 TLR6Q9Y2C9 796 aa16.96■□□□□ 0.31
MRPL28-202ENST00000389675 SIT1Q9Y3P8 196 aa16.96■□□□□ 0.31
MRPL28-202ENST00000389675 NCAM2O15394 837 aa16.95■□□□□ 0.3
MRPL28-202ENST00000389675 APOEP02649 317 aa16.95■□□□□ 0.3
MRPL28-202ENST00000389675 KLKB1P03952 638 aa16.95■□□□□ 0.3
MRPL28-202ENST00000389675 CHKAP35790 457 aa16.95■□□□□ 0.3
MRPL28-202ENST00000389675 MATKP42679 507 aa16.95■□□□□ 0.3
MRPL28-202ENST00000389675 SLC11A2P49281 568 aa16.95■□□□□ 0.3
MRPL28-202ENST00000389675 CLCN5P51795 746 aa16.95■□□□□ 0.3
MRPL28-202ENST00000389675 GAD2Q05329 585 aa16.95■□□□□ 0.3
MRPL28-202ENST00000389675 RING1Q06587 406 aa16.95■□□□□ 0.3
MRPL28-202ENST00000389675 NNTQ13423 1086 aa16.95■□□□□ 0.3
MRPL28-202ENST00000389675 PON2Q15165 354 aa16.95■□□□□ 0.3
MRPL28-202ENST00000389675 CWF19L1Q69YN2 538 aaKnown RBP16.95■□□□□ 0.3
MRPL28-202ENST00000389675 RHBDF2Q6PJF5 856 aa16.95■□□□□ 0.3
MRPL28-202ENST00000389675 TPGS1Q6ZTW0 290 aa16.95■□□□□ 0.3
MRPL28-202ENST00000389675 PJA1Q8NG27 643 aa16.95■□□□□ 0.3
MRPL28-202ENST00000389675 PRRX2Q99811 253 aa16.95■□□□□ 0.3
MRPL28-202ENST00000389675 SELENOOQ9BVL4 669 aa16.95■□□□□ 0.3
MRPL28-202ENST00000389675 RRN3Q9NYV6 651 aa16.95■□□□□ 0.3
MRPL28-202ENST00000389675 COL4A3Q01955 1670 aa16.94■□□□□ 0.3
MRPL28-202ENST00000389675 ANKRD62A6NC57 917 aa16.94■□□□□ 0.3
MRPL28-202ENST00000389675 NEDD8-MDP1E9PL57 170 aa16.94■□□□□ 0.3
MRPL28-202ENST00000389675 DDX3XO00571 662 aaKnown RBP eCLIP16.94■□□□□ 0.32e-15■■■■□ 23
MRPL28-202ENST00000389675 IRAK2O43187 625 aa16.94■□□□□ 0.3
MRPL28-202ENST00000389675 MFAP3LO75121 409 aa16.94■□□□□ 0.3
MRPL28-202ENST00000389675 MOCS2O96007 188 aaPredicted RBP16.94■□□□□ 0.3
MRPL28-202ENST00000389675 AOC1P19801 751 aa16.94■□□□□ 0.3
MRPL28-202ENST00000389675 TARSP26639 723 aaKnown RBP16.94■□□□□ 0.3
MRPL28-202ENST00000389675 SULT1E1P49888 294 aa16.94■□□□□ 0.3
MRPL28-202ENST00000389675 VCPP55072 806 aaKnown RBP16.94■□□□□ 0.3
MRPL28-202ENST00000389675 PITX1P78337 314 aaPredicted RBP16.94■□□□□ 0.3
MRPL28-202ENST00000389675 NME3Q13232 169 aa16.94■□□□□ 0.3
MRPL28-202ENST00000389675 HGSNATQ68CP4 663 aa16.94■□□□□ 0.3
MRPL28-202ENST00000389675 DNAJC24Q6P3W2 148 aa16.94■□□□□ 0.3
MRPL28-202ENST00000389675 TXNDC11Q6PKC3 985 aa16.94■□□□□ 0.3
MRPL28-202ENST00000389675 SND1Q7KZF4 910 aaKnown RBP eCLIP16.94■□□□□ 0.3
MRPL28-202ENST00000389675 MON1BQ7L1V2 547 aa16.94■□□□□ 0.3
MRPL28-202ENST00000389675 TMEM25Q86YD3 366 aa16.94■□□□□ 0.3
MRPL28-202ENST00000389675 CNGA4Q8IV77 575 aa16.94■□□□□ 0.3
MRPL28-202ENST00000389675 MRFAP1L1Q96HT8 127 aa16.94■□□□□ 0.3
MRPL28-202ENST00000389675 P2RY13Q9BPV8 354 aa16.94■□□□□ 0.3
MRPL28-202ENST00000389675 BBS2Q9BXC9 721 aa16.94■□□□□ 0.3
MRPL28-202ENST00000389675 TAS2R14Q9NYV8 317 aa16.94■□□□□ 0.3
MRPL28-202ENST00000389675 SLC12A6Q9UHW9 1150 aa16.94■□□□□ 0.3
MRPL28-202ENST00000389675 AKR1B15C9JRZ8 316 aaPredicted RBP16.93■□□□□ 0.3
MRPL28-202ENST00000389675 M0QYT0 321 aa16.93■□□□□ 0.3
MRPL28-202ENST00000389675 LATS1O95835 1130 aa16.93■□□□□ 0.3
MRPL28-202ENST00000389675 IGLV3-27P01718 113 aa16.93■□□□□ 0.3
MRPL28-202ENST00000389675 CYBBP04839 570 aa16.93■□□□□ 0.3
MRPL28-202ENST00000389675 DCNP07585 359 aaKnown RBP16.93■□□□□ 0.3
MRPL28-202ENST00000389675 SLC2A3P11169 496 aa16.93■□□□□ 0.3
MRPL28-202ENST00000389675 KRT3P12035 628 aa16.93■□□□□ 0.3
MRPL28-202ENST00000389675 ADKP55263 362 aaKnown RBP16.93■□□□□ 0.3
MRPL28-202ENST00000389675 GRSF1Q12849 480 aaKnown RBP eCLIP16.93■□□□□ 0.3
MRPL28-202ENST00000389675 TCF15Q12870 199 aa16.93■□□□□ 0.3
MRPL28-202ENST00000389675 PTP4A2Q12974 167 aa16.93■□□□□ 0.3
MRPL28-202ENST00000389675 LRRC32Q14392 662 aa16.93■□□□□ 0.3
MRPL28-202ENST00000389675 ZC3H12AQ5D1E8 599 aaKnown RBP16.93■□□□□ 0.3
MRPL28-202ENST00000389675 MCOLN2Q8IZK6 566 aa16.93■□□□□ 0.3
MRPL28-202ENST00000389675 C3orf20Q8ND61 904 aa16.93■□□□□ 0.3
MRPL28-202ENST00000389675 CD101Q93033 1021 aa16.93■□□□□ 0.3
MRPL28-202ENST00000389675 BHMTQ93088 406 aa16.93■□□□□ 0.3
MRPL28-202ENST00000389675 FCRL2Q96LA5 508 aaPredicted RBP16.93■□□□□ 0.3
MRPL28-202ENST00000389675 DNAJC7Q99615 494 aa16.93■□□□□ 0.3
MRPL28-202ENST00000389675 DDX50Q9BQ39 737 aaKnown RBP16.93■□□□□ 0.3
MRPL28-202ENST00000389675 OSBPL6Q9BZF3 934 aa16.93■□□□□ 0.3
MRPL28-202ENST00000389675 DEF6Q9H4E7 631 aa16.93■□□□□ 0.3
MRPL28-202ENST00000389675 ABHD10Q9NUJ1 306 aa16.93■□□□□ 0.3
MRPL28-202ENST00000389675 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.93■□□□□ 0.3
MRPL28-202ENST00000389675 ADAMTS1Q9UHI8 967 aa16.93■□□□□ 0.3
MRPL28-202ENST00000389675 TMEM59LQ9UK28 342 aa16.93■□□□□ 0.3
MRPL28-202ENST00000389675 MTF2Q9Y483 593 aaPredicted RBP16.93■□□□□ 0.3
MRPL28-202ENST00000389675 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.92■□□□□ 0.3
MRPL28-202ENST00000389675 HOXC11O43248 304 aaPredicted RBP16.92■□□□□ 0.3
MRPL28-202ENST00000389675 PI15O43692 258 aa16.92■□□□□ 0.3
MRPL28-202ENST00000389675 ACSL4O60488 711 aa16.92■□□□□ 0.3
MRPL28-202ENST00000389675 TSPAN3O60637 253 aa16.92■□□□□ 0.3
MRPL28-202ENST00000389675 RTN2O75298 545 aa16.92■□□□□ 0.3
MRPL28-202ENST00000389675 IGLV3-25P01717 112 aa16.92■□□□□ 0.3
MRPL28-202ENST00000389675 FTLP02792 175 aaPredicted RBP16.92■□□□□ 0.3
MRPL28-202ENST00000389675 PLEKP08567 350 aaPredicted RBP16.92■□□□□ 0.3
MRPL28-202ENST00000389675 GZMAP12544 262 aa16.92■□□□□ 0.3
MRPL28-202ENST00000389675 ABCB4P21439 1286 aa16.92■□□□□ 0.3
MRPL28-202ENST00000389675 AVPR2P30518 371 aa16.92■□□□□ 0.3
MRPL28-202ENST00000389675 HNRNPH3P31942 346 aaKnown RBP16.92■□□□□ 0.3
MRPL28-202ENST00000389675 CCR1P32246 355 aa16.92■□□□□ 0.3
MRPL28-202ENST00000389675 FLT3P36888 993 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms