RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 CYBBP04839 570 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 C1SP09871 688 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 FAM163BP0C2L3 166 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 CDK4P11802 303 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 RARGP13631 454 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 CCDC130P13994 396 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 GLDCP23378 1020 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 CD27P26842 260 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 BCAT1P54687 386 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 MYL6P60660 151 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 ENPP2Q13822 863 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 E2F5Q15329 346 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 FNDC3BQ53EP0 1204 aaKnown RBP10.15□□□□□ -0.78
IFT88-203ENST00000389373 RRAGBQ5VZM2 374 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 SCARA5Q6ZMJ2 495 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 ANKS1BQ7Z6G8 1248 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 ACOT1Q86TX2 421 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 LURAP1LQ8IV03 231 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 ELMO3Q96BJ8 720 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 CCDC127Q96BQ5 260 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 DNAJC19Q96DA6 116 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 ELF4Q99607 663 aaPredicted RBP10.15□□□□□ -0.78
IFT88-203ENST00000389373 SMOQ99835 787 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 ACE2Q9BYF1 805 aaPredicted RBP10.15□□□□□ -0.78
IFT88-203ENST00000389373 SMYD3Q9H7B4 428 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 CPNE5Q9HCH3 593 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 PANK4Q9NVE7 773 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 OSER1Q9NX31 292 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 CCDC39Q9UFE4 941 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 SLC27A6Q9Y2P4 619 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 KIF3AQ9Y496 699 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 HELZ2Q9BYK8 2649 aaKnown RBP10.14□□□□□ -0.79
IFT88-203ENST00000389373 KIAA0391O15091 583 aaKnown RBP10.14□□□□□ -0.79
IFT88-203ENST00000389373 CYP26A1O43174 497 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 TSPAN3O60637 253 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 STC2O76061 302 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 WISP1O95388 367 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 ADORA2BP29275 332 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 ACADVLP49748 655 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 RHDQ02161 417 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 ALCAMQ13740 583 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 FYB2Q5VWT5 728 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 FBXL19Q6PCT2 694 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 KDM7AQ6ZMT4 941 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 Q6ZNB5 142 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 ZMIZ2Q8NF64 920 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 DDI1Q8WTU0 396 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 CYB5D2Q8WUJ1 264 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 SKA1Q96BD8 255 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 TNIP3Q96KP6 325 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 SLC6A18Q96N87 628 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 NMUR1Q9HB89 426 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 OSGEPQ9NPF4 335 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 AASDHPPTQ9NRN7 309 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 HSPBP1Q9NZL4 362 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 RASAL2Q9UJF2 1139 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 NAGPAQ9UK23 515 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 CLEC4EQ9ULY5 219 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 NCKAP1Q9Y2A7 1128 aa10.14□□□□□ -0.79
IFT88-203ENST00000389373 TMEM131Q92545 1883 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 FAM92AA1XBS5 289 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 VILLO15195 856 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 CLIC2O15247 247 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 PAPSS1O43252 624 aaPredicted RBP10.13□□□□□ -0.79
IFT88-203ENST00000389373 KIF20AO95235 890 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 PENKP01210 267 aaPredicted RBP10.13□□□□□ -0.79
IFT88-203ENST00000389373 KLKB1P03952 638 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 CORO1AP31146 461 aaKnown RBP10.13□□□□□ -0.79
IFT88-203ENST00000389373 CHKAP35790 457 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 TMPRSS3P57727 454 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 RPS14P62263 151 aaKnown RBP10.13□□□□□ -0.79
IFT88-203ENST00000389373 BNIP3Q12983 259 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 TBC1D25Q3MII6 688 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 TMEM215Q68D42 235 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 KIAA0895LQ68EN5 471 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 GPRIN1Q7Z2K8 1008 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 PRICKLE2Q7Z3G6 844 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 FUKQ8N0W3 1084 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 ZNF248Q8NDW4 579 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 SLC2A14Q8TDB8 520 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 ZNF516Q92618 1163 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 SYAP1Q96A49 352 aaPredicted RBP10.13□□□□□ -0.79
IFT88-203ENST00000389373 PIWIL1Q96J94 861 aaKnown RBP10.13□□□□□ -0.79
IFT88-203ENST00000389373 CGRRF1Q99675 332 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 HNRNPABQ99729 332 aaKnown RBP10.13□□□□□ -0.79
IFT88-203ENST00000389373 PANK2Q9BZ23 570 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 KIAA1586Q9HCI6 787 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 CYLDQ9NQC7 956 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 OLFML3Q9NRN5 406 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 FAM49BQ9NUQ9 324 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 STK17AQ9UEE5 414 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 PLA2G4CQ9UP65 541 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 CLCA2Q9UQC9 943 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 ZNF510Q9Y2H8 683 aa10.13□□□□□ -0.79
IFT88-203ENST00000389373 TIMM44O43615 452 aa10.12□□□□□ -0.79
IFT88-203ENST00000389373 WNT1P04628 370 aa10.12□□□□□ -0.79
IFT88-203ENST00000389373 C6P13671 934 aa10.12□□□□□ -0.79
IFT88-203ENST00000389373 ATICP31939 592 aa10.12□□□□□ -0.79
IFT88-203ENST00000389373 CYP2J2P51589 502 aa10.12□□□□□ -0.79
IFT88-203ENST00000389373 RACK1P63244 317 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms