RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 H3BRJ5 948 aa20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 I6L893 689 aaPredicted RBP20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 TNFRSF10BO14763 440 aa20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 SYN3O14994 580 aa20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 ALOX15BO15296 676 aa20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 F9P00740 461 aa20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 ALDH2P05091 517 aa20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 AIF1P55008 147 aa20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 IFRD2Q12894 506 aaPredicted RBP20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 AUHQ13825 339 aaKnown RBP20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 FAM171A1Q5VUB5 890 aa20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 KCNT2Q6UVM3 1135 aa20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 SLC39A5Q6ZMH5 540 aa20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 CEP57Q86XR8 500 aa20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 DCP1BQ8IZD4 617 aaKnown RBP20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 COLEC11Q9BWP8 271 aa20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 ABI2Q9NYB9 513 aaPredicted RBP20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 AMHP03971 560 aa20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 IRAK1P51617 712 aa20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 SLC5A3P53794 718 aa20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 IFI35P80217 286 aaPredicted RBP20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 PDIA2Q13087 525 aaKnown RBP20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 HIF1AQ16665 826 aa20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 FNBP1LQ5T0N5 605 aa20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 ANKRD33Q7Z3H0 272 aa20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 CDKL3Q8IVW4 592 aaPredicted RBP20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 SCN4BQ8IWT1 228 aa20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 ZBED8Q8IZ13 594 aa20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 ARFGAP2Q8N6H7 521 aa20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 GPR62Q9BZJ7 368 aa20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 PPP1R12CQ9BZL4 782 aa20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 PAK5Q9P286 719 aa20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 XPO7Q9UIA9 1087 aaKnown RBP20.56■□□□□ 0.88
PDLIM5-205ENST00000380180 FAM72CH0Y354 149 aa20.55■□□□□ 0.88
PDLIM5-205ENST00000380180 TMEM63AO94886 807 aa20.55■□□□□ 0.88
PDLIM5-205ENST00000380180 PPP2R2AP63151 447 aa20.55■□□□□ 0.88
PDLIM5-205ENST00000380180 FAAP100Q0VG06 881 aa20.55■□□□□ 0.88
PDLIM5-205ENST00000380180 SCAPQ12770 1279 aa20.55■□□□□ 0.88
PDLIM5-205ENST00000380180 SLC45A4Q5BKX6 768 aa20.55■□□□□ 0.88
PDLIM5-205ENST00000380180 FAM72AQ5TYM5 149 aa20.55■□□□□ 0.88
PDLIM5-205ENST00000380180 FAM72DQ6L9T8 149 aa20.55■□□□□ 0.88
PDLIM5-205ENST00000380180 FAM72BQ86X60 149 aa20.55■□□□□ 0.88
PDLIM5-205ENST00000380180 WDCPQ9H6R7 721 aa20.55■□□□□ 0.88
PDLIM5-205ENST00000380180 PRDM16Q9HAZ2 1276 aa20.55■□□□□ 0.88
PDLIM5-205ENST00000380180 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.55■□□□□ 0.88
PDLIM5-205ENST00000380180 SMAPO00193 183 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 EEF2KO00418 725 aaKnown RBP20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 BANF1O75531 89 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 SLC11A1P49279 550 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 CXCR3P49682 368 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 ARL4CP56559 192 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 GNGT1P63211 74 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 GUCY1A3Q02108 690 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 CTXN3Q4LDR2 81 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 MFSD5Q6N075 450 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 FAM43BQ6ZT52 329 aaPredicted RBP20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 NPAS4Q8IUM7 802 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 B3GALT6Q96L58 329 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 TTC25Q96NG3 672 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 SERPINB12Q96P63 405 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 MARCH5Q9NX47 278 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 DGKIO75912 1065 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 AGTP01019 485 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 CXCL10P02778 98 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 MNX1P50219 401 aaPredicted RBP20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 PPARDQ03181 441 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 DPYSQ14117 519 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 MRPL58Q14197 206 aaKnown RBP20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 NFE2Q16621 373 aaPredicted RBP20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 ARL13BQ3SXY8 428 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 MSS51Q4VC12 460 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 TNFAIP8L3Q5GJ75 292 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 RFX8Q6ZV50 586 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 DEFB128Q7Z7B8 93 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 TAC4Q86UU9 113 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 CCDC13Q8IYE1 715 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 OLFM3Q96PB7 478 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 RAB6BQ9NRW1 208 aa20.54■□□□□ 0.88
PDLIM5-205ENST00000380180 SHROOM3Q8TF72 1996 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 GREB1Q4ZG55 1949 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 ERICH4A6NGS2 130 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 A6NNZ2 444 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 TBKBP1A7MCY6 615 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 NT5C1B-RDH14C9J2C7 533 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 TCEA3O75764 348 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 ABHD2P08910 425 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 CYP2C18P33260 490 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 YWHAGP61981 247 aaKnown RBP eCLIP20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 SEMA3BQ13214 749 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 TUBB8Q3ZCM7 444 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 SYCP2LQ5T4T6 812 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 BZW1Q7L1Q6 419 aaKnown RBP20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 BEND5Q7L4P6 421 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 CCDC110Q8TBZ0 833 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 DQX1Q8TE96 717 aaKnown RBP20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 QKIQ96PU8 341 aaKnown RBP eCLIP20.53■□□□□ 0.884e-24■■■■■ 117.3
PDLIM5-205ENST00000380180 TRIM62Q9BVG3 475 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 TKTL2Q9H0I9 626 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 HOXA2O43364 376 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms