RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 SMG5Q9UPR3 1016 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 USP3Q9Y6I4 520 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 WDR91A4D1P6 747 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 CXorf49A8MYA2 514 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 XPO1O14980 1071 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 IGHA2P01877 340 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 CTSHP09668 335 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 C6orf222P0C671 652 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 PTPN1P18031 435 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 WARSP23381 471 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 MLH1P40692 756 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 MATKP42679 507 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 SULT1E1P49888 294 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 FAAP100Q0VG06 881 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 PDK4Q16654 411 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 GALNTL6Q49A17 601 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 MDH1BQ5I0G3 518 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 PPP2R2DQ66LE6 453 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 CLEC20AQ6ZU45 233 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 ZNF534Q76KX8 674 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 ECHDC2Q86YB7 292 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 MPP5Q8N3R9 675 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 ZNF276Q8N554 614 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 RNF169Q8NCN4 708 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 C3orf58Q8NDZ4 430 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 TCP10LQ8TDR4 215 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 SERAC1Q96JX3 654 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 TNIP3Q96KP6 325 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 CYTH2Q99418 400 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 HNRNPABQ99729 332 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 PAAF1Q9BRP4 392 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 DUSP16Q9BY84 665 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 PPCSQ9HAB8 311 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 POPDC2Q9HBU9 364 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 PHTF1Q9UMS5 762 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 ARL2BPQ9Y2Y0 163 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 TTLL3Q9Y4R7 772 aa8.25□□□□□ -1.09
PDLIM5-204ENST00000380176 NUP205Q92621 2012 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 TPD52L2O43399 206 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 XPOTO43592 962 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 UGT1A9O60656 530 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 DNAJC8O75937 253 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 AMHP03971 560 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 VAV1P15498 845 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 ACADSBP45954 432 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 CACNA2D1P54289 1103 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 MAP3K7CLP57077 242 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 PTK7Q13308 1070 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 SLC45A4Q5BKX6 768 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 CXCL17Q6UXB2 119 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 ARCQ7LC44 396 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 VSIG1Q86XK7 387 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 TP53INP2Q8IXH6 220 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 TOP6BLQ8N6T0 577 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 BANPQ8N9N5 519 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 SLC44A1Q8WWI5 657 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 GAD1Q99259 594 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 LGMNQ99538 433 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 UGT1A7Q9HAW7 530 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 UGT1A10Q9HAW8 530 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 UGT1A8Q9HAW9 530 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 ALG13Q9NP73 1137 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 CRTAC1Q9NQ79 661 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 SMYD2Q9NRG4 433 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 KLC4Q9NSK0 619 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 GTF2IRD1Q9UHL9 959 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 FZD10Q9ULW2 581 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 ST3GAL5Q9UNP4 418 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 CDY2AQ9Y6F7 541 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 SCN10AQ9Y5Y9 1956 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 CFAP69A5D8W1 941 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 GABRDO14764 452 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 NRP1O14786 923 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 NPR3P17342 541 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 DESP17661 470 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 LRPAP1P30533 357 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 CLCNKBP51801 687 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 MRPS5P82675 430 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 XRCC4Q13426 336 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 SLC25A52Q3SY17 297 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 TMEM259Q4ZIN3 620 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 EFHC1Q5JVL4 640 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 HHATQ5VTY9 493 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 GDF6Q6KF10 455 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 SH2D5Q6ZV89 423 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 ARMCX6Q7L4S7 300 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 STRADAQ7RTN6 431 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 SENP8Q96LD8 212 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 KCNK16Q96T55 309 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 CEP41Q9BYV8 373 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 KLC2Q9H0B6 622 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 PIF1Q9H611 641 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 CYLDQ9NQC7 956 aa8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 DDX43Q9NXZ2 648 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-204ENST00000380176 ZNF487B1APH4 448 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 MFSD11O43934 449 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 GCATO75600 419 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 PGK1P00558 417 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 CHRNA1P02708 482 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 FYNP06241 537 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms