RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 FAM72BQ86X60 149 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 TRIM43Q96BQ3 446 aaPredicted RBP18■□□□□ 0.47
THUMPD2-201ENST00000378727 TTPALQ9BTX7 342 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 VN1R3Q9BXE9 311 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 IGLV3-25P01717 112 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 NUDT17P0C025 328 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 ZFXP17010 805 aaPredicted RBP17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 STIP1P31948 543 aaKnown RBP17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 SEMA3BQ13214 749 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 EIF4EBP2Q13542 120 aaPredicted RBP17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 FAM182AQ5T1J6 154 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 PRSS55Q6UWB4 352 aaPredicted RBP17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 LRRN4Q8WUT4 740 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 TOP1MTQ969P6 601 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 CRISPLD1Q9H336 500 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 CDC42EP4Q9H3Q1 356 aaKnown RBP17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 NMUR1Q9HB89 426 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 FARP1Q9Y4F1 1045 aaPredicted RBP17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 MTMR11A4FU01 709 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 GOLGA8KD6RF30 607 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 TRIM66O15016 1216 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 RIPK2O43353 540 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 TIMP1P01033 207 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 SHBGP04278 402 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 CPB1P15086 417 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 CSF2RAP15509 400 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 ALDH7A1P49419 539 aaKnown RBP17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 LBX1P52954 281 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 USP46P62068 366 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 GPR17Q13304 367 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 SLC29A2Q14542 456 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 MORF4L2Q15014 288 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 RNF19BQ6ZMZ0 732 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 ANKS3Q6ZW76 656 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 NUP93Q8N1F7 819 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 ZCCHC9Q8N567 271 aaKnown RBP17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 GOLGA6L1Q8N7Z2 621 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 TRIM62Q9BVG3 475 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 ABCC13Q9NSE7 274 aa17.99■□□□□ 0.47
THUMPD2-201ENST00000378727 BCLAF3A2AJT9 711 aaKnown RBP17.98■□□□□ 0.47
THUMPD2-201ENST00000378727 H3BRJ5 948 aa17.98■□□□□ 0.47
THUMPD2-201ENST00000378727 CREB3O43889 395 aa17.98■□□□□ 0.47
THUMPD2-201ENST00000378727 SOAT2O75908 522 aa17.98■□□□□ 0.47
THUMPD2-201ENST00000378727 RBL1P28749 1068 aa17.98■□□□□ 0.47
THUMPD2-201ENST00000378727 CTCFP49711 727 aaPredicted RBP17.98■□□□□ 0.47
THUMPD2-201ENST00000378727 C1QTNF8P60827 252 aa17.98■□□□□ 0.47
THUMPD2-201ENST00000378727 DEFB103AP81534 67 aa17.98■□□□□ 0.47
THUMPD2-201ENST00000378727 DPYSQ14117 519 aa17.98■□□□□ 0.47
THUMPD2-201ENST00000378727 PKN2Q16513 984 aaKnown RBP17.98■□□□□ 0.47
THUMPD2-201ENST00000378727 TRMT10CQ7L0Y3 403 aaKnown RBP17.98■□□□□ 0.47
THUMPD2-201ENST00000378727 RNF168Q8IYW5 571 aaPredicted RBP17.98■□□□□ 0.47
THUMPD2-201ENST00000378727 GPR152Q8TDT2 470 aa17.98■□□□□ 0.47
THUMPD2-201ENST00000378727 CPT1BQ92523 772 aa17.98■□□□□ 0.47
THUMPD2-201ENST00000378727 PRCCQ92733 491 aaPredicted RBP17.98■□□□□ 0.47
THUMPD2-201ENST00000378727 RTP4Q96DX8 246 aa17.98■□□□□ 0.47
THUMPD2-201ENST00000378727 TSPYL1Q9H0U9 437 aa17.98■□□□□ 0.47
THUMPD2-201ENST00000378727 OSER1Q9NX31 292 aa17.98■□□□□ 0.47
THUMPD2-201ENST00000378727 DTLQ9NZJ0 730 aa17.98■□□□□ 0.47
THUMPD2-201ENST00000378727 SCML2Q9UQR0 700 aa17.98■□□□□ 0.47
THUMPD2-201ENST00000378727 SLC27A5Q9Y2P5 690 aa17.98■□□□□ 0.47
THUMPD2-201ENST00000378727 ABHD14A-ACY1A0A1B0GW23 586 aa17.97■□□□□ 0.47
THUMPD2-201ENST00000378727 A0A1W2PQH9 124 aa17.97■□□□□ 0.47
THUMPD2-201ENST00000378727 H7C4K7 107 aa17.97■□□□□ 0.47
THUMPD2-201ENST00000378727 NR2C2P49116 596 aa17.97■□□□□ 0.47
THUMPD2-201ENST00000378727 BTBD8Q5XKL5 378 aa17.97■□□□□ 0.47
THUMPD2-201ENST00000378727 DENND2CQ68D51 928 aa17.97■□□□□ 0.47
THUMPD2-201ENST00000378727 RFX8Q6ZV50 586 aa17.97■□□□□ 0.47
THUMPD2-201ENST00000378727 CCDC33Q8N5R6 958 aa17.97■□□□□ 0.47
THUMPD2-201ENST00000378727 ZNF689Q96CS4 500 aaPredicted RBP17.97■□□□□ 0.47
THUMPD2-201ENST00000378727 TKTL2Q9H0I9 626 aa17.97■□□□□ 0.47
THUMPD2-201ENST00000378727 WDCPQ9H6R7 721 aa17.97■□□□□ 0.47
THUMPD2-201ENST00000378727 RC3H2Q9HBD1 1191 aaKnown RBP17.97■□□□□ 0.47
THUMPD2-201ENST00000378727 TMBIM4Q9HC24 238 aa17.97■□□□□ 0.47
THUMPD2-201ENST00000378727 PRDM5Q9NQX1 630 aaPredicted RBP17.97■□□□□ 0.47
THUMPD2-201ENST00000378727 IL37Q9NZH6 218 aa17.97■□□□□ 0.47
THUMPD2-201ENST00000378727 SHOC2Q9UQ13 582 aa17.97■□□□□ 0.47
THUMPD2-201ENST00000378727 GREB1Q4ZG55 1949 aa17.97■□□□□ 0.47
THUMPD2-201ENST00000378727 EEF2KO00418 725 aaKnown RBP17.97■□□□□ 0.47
THUMPD2-201ENST00000378727 KCNN4O15554 427 aa17.97■□□□□ 0.47
THUMPD2-201ENST00000378727 XRCC4Q13426 336 aa17.97■□□□□ 0.47
THUMPD2-201ENST00000378727 ANKRD22Q5VYY1 191 aa17.97■□□□□ 0.47
THUMPD2-201ENST00000378727 TAB3Q8N5C8 712 aaPredicted RBP17.97■□□□□ 0.47
THUMPD2-201ENST00000378727 IGSF21Q96ID5 467 aa17.97■□□□□ 0.47
THUMPD2-201ENST00000378727 OLFM3Q96PB7 478 aa17.97■□□□□ 0.47
THUMPD2-201ENST00000378727 KIAA0355O15063 1070 aa17.96■□□□□ 0.47
THUMPD2-201ENST00000378727 ADAM12O43184 909 aa17.96■□□□□ 0.47
THUMPD2-201ENST00000378727 IRAK2O43187 625 aa17.96■□□□□ 0.47
THUMPD2-201ENST00000378727 MFSD11O43934 449 aa17.96■□□□□ 0.47
THUMPD2-201ENST00000378727 ARL13BQ3SXY8 428 aa17.96■□□□□ 0.47
THUMPD2-201ENST00000378727 KCNT2Q6UVM3 1135 aa17.96■□□□□ 0.47
THUMPD2-201ENST00000378727 RELL1Q8IUW5 271 aa17.96■□□□□ 0.47
THUMPD2-201ENST00000378727 NAT8LQ8N9F0 302 aa17.96■□□□□ 0.47
THUMPD2-201ENST00000378727 SPPL2BQ8TCT7 592 aa17.96■□□□□ 0.47
THUMPD2-201ENST00000378727 CASP10Q92851 521 aa17.96■□□□□ 0.47
THUMPD2-201ENST00000378727 FOXP3Q9BZS1 431 aa17.96■□□□□ 0.47
THUMPD2-201ENST00000378727 SMOC2Q9H3U7 446 aa17.96■□□□□ 0.47
THUMPD2-201ENST00000378727 PRDM16Q9HAZ2 1276 aa17.96■□□□□ 0.47
THUMPD2-201ENST00000378727 SFMBT1Q9UHJ3 866 aa17.96■□□□□ 0.47
THUMPD2-201ENST00000378727 ADAM21Q9UKJ8 722 aa17.96■□□□□ 0.47
THUMPD2-201ENST00000378727 NUDT5Q9UKK9 219 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms