RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 UNC45BQ8IWX7 931 aa20.14■□□□□ 0.81
SSU72-204ENST00000378726 ANKS4BQ8N8V4 417 aa20.14■□□□□ 0.81
SSU72-204ENST00000378726 PWWP2AQ96N64 755 aa20.14■□□□□ 0.81
SSU72-204ENST00000378726 CASD1Q96PB1 797 aa20.14■□□□□ 0.81
SSU72-204ENST00000378726 HIPK3Q9H422 1215 aa20.14■□□□□ 0.81
SSU72-204ENST00000378726 ZNF487B1APH4 448 aa20.14■□□□□ 0.81
SSU72-204ENST00000378726 OAZ2O95190 189 aa20.14■□□□□ 0.81
SSU72-204ENST00000378726 ALDH2P05091 517 aa20.14■□□□□ 0.81
SSU72-204ENST00000378726 VIMP08670 466 aaKnown RBP20.14■□□□□ 0.81
SSU72-204ENST00000378726 DEUP1Q05D60 604 aa20.14■□□□□ 0.81
SSU72-204ENST00000378726 ITIH4Q14624 930 aa20.14■□□□□ 0.81
SSU72-204ENST00000378726 NOMO1Q15155 1222 aa20.14■□□□□ 0.81
SSU72-204ENST00000378726 SLC9A4Q6AI14 798 aa20.14■□□□□ 0.81
SSU72-204ENST00000378726 DARS2Q6PI48 645 aaKnown RBP20.14■□□□□ 0.81
SSU72-204ENST00000378726 SPATA2LQ8IUW3 424 aaPredicted RBP20.14■□□□□ 0.81
SSU72-204ENST00000378726 FAF2Q96CS3 445 aa20.14■□□□□ 0.81
SSU72-204ENST00000378726 KCTD15Q96SI1 283 aaPredicted RBP20.14■□□□□ 0.81
SSU72-204ENST00000378726 FZD10Q9ULW2 581 aa20.14■□□□□ 0.81
SSU72-204ENST00000378726 HEY1Q9Y5J3 304 aa20.14■□□□□ 0.81
SSU72-204ENST00000378726 LTFP02788 710 aa20.13■□□□□ 0.81
SSU72-204ENST00000378726 OR4Q2P0C623 313 aa20.13■□□□□ 0.81
SSU72-204ENST00000378726 CHRM1P11229 460 aaPredicted RBP20.13■□□□□ 0.81
SSU72-204ENST00000378726 NCAM1P13591 858 aa20.13■□□□□ 0.81
SSU72-204ENST00000378726 CYP2F1P24903 491 aa20.13■□□□□ 0.81
SSU72-204ENST00000378726 WLSQ5T9L3 541 aa20.13■□□□□ 0.81
SSU72-204ENST00000378726 C4orf50Q6ZRC1 276 aa20.13■□□□□ 0.81
SSU72-204ENST00000378726 ANKRD33Q7Z3H0 272 aa20.13■□□□□ 0.81
SSU72-204ENST00000378726 TAX1BP1Q86VP1 789 aa20.13■□□□□ 0.81
SSU72-204ENST00000378726 SLC7A14Q8TBB6 771 aa20.13■□□□□ 0.81
SSU72-204ENST00000378726 TACO1Q9BSH4 297 aaKnown RBP20.13■□□□□ 0.81
SSU72-204ENST00000378726 CCDC134Q9H6E4 229 aa20.13■□□□□ 0.81
SSU72-204ENST00000378726 DNAJC17Q9NVM6 304 aaKnown RBP20.13■□□□□ 0.81
SSU72-204ENST00000378726 TGM2P21980 687 aa20.12■□□□□ 0.81
SSU72-204ENST00000378726 ELF3P78545 371 aaPredicted RBP20.12■□□□□ 0.81
SSU72-204ENST00000378726 FAAP100Q0VG06 881 aa20.12■□□□□ 0.81
SSU72-204ENST00000378726 PM20D1Q6GTS8 502 aa20.12■□□□□ 0.81
SSU72-204ENST00000378726 PYROXD2Q8N2H3 581 aa20.12■□□□□ 0.81
SSU72-204ENST00000378726 FAM71DQ8N9W8 422 aa20.12■□□□□ 0.81
SSU72-204ENST00000378726 PPP1R12CQ9BZL4 782 aa20.12■□□□□ 0.81
SSU72-204ENST00000378726 H7C0C1 242 aa20.12■□□□□ 0.81
SSU72-204ENST00000378726 MGRN1O60291 552 aa20.12■□□□□ 0.81
SSU72-204ENST00000378726 STIP1P31948 543 aaKnown RBP20.12■□□□□ 0.81
SSU72-204ENST00000378726 GRIK1P39086 918 aa20.12■□□□□ 0.81
SSU72-204ENST00000378726 ATP5OP48047 213 aa20.12■□□□□ 0.81
SSU72-204ENST00000378726 ROR1Q01973 937 aa20.12■□□□□ 0.81
SSU72-204ENST00000378726 FAM43BQ6ZT52 329 aaPredicted RBP20.12■□□□□ 0.81
SSU72-204ENST00000378726 TRMT10CQ7L0Y3 403 aaKnown RBP20.12■□□□□ 0.81
SSU72-204ENST00000378726 BHLHA9Q7RTU4 235 aa20.12■□□□□ 0.81
SSU72-204ENST00000378726 CROCCP2Q86T23 111 aa20.12■□□□□ 0.81
SSU72-204ENST00000378726 EXOC3L1Q86VI1 746 aa20.12■□□□□ 0.81
SSU72-204ENST00000378726 CEP57Q86XR8 500 aa20.12■□□□□ 0.81
SSU72-204ENST00000378726 ADAM32Q8TC27 787 aa20.12■□□□□ 0.81
SSU72-204ENST00000378726 PIGVQ9NUD9 493 aa20.12■□□□□ 0.81
SSU72-204ENST00000378726 SAMD15Q9P1V8 674 aa20.12■□□□□ 0.81
SSU72-204ENST00000378726 MCM8Q9UJA3 840 aa20.12■□□□□ 0.81
SSU72-204ENST00000378726 SLC12A4Q9UP95 1085 aa20.12■□□□□ 0.81
SSU72-204ENST00000378726 TET1Q8NFU7 2136 aa20.12■□□□□ 0.81
SSU72-204ENST00000378726 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.11■□□□□ 0.81
SSU72-204ENST00000378726 MNX1P50219 401 aaPredicted RBP20.11■□□□□ 0.81
SSU72-204ENST00000378726 TLE2Q04725 743 aa20.11■□□□□ 0.81
SSU72-204ENST00000378726 SLC39A12Q504Y0 691 aa20.11■□□□□ 0.81
SSU72-204ENST00000378726 PSTKQ8IV42 348 aaKnown RBP20.11■□□□□ 0.81
SSU72-204ENST00000378726 SCAMP5Q8TAC9 235 aa20.11■□□□□ 0.81
SSU72-204ENST00000378726 IRGQQ8WZA9 623 aa20.11■□□□□ 0.81
SSU72-204ENST00000378726 EDEM1Q92611 657 aa20.11■□□□□ 0.81
SSU72-204ENST00000378726 CSPG4P5Q96PW8 444 aa20.11■□□□□ 0.81
SSU72-204ENST00000378726 CDC42EP4Q9H3Q1 356 aaKnown RBP20.11■□□□□ 0.81
SSU72-204ENST00000378726 PNPLA8Q9NP80 782 aa20.11■□□□□ 0.81
SSU72-204ENST00000378726 TMPRSS4Q9NRS4 437 aa20.11■□□□□ 0.81
SSU72-204ENST00000378726 ADAM28Q9UKQ2 775 aa20.11■□□□□ 0.81
SSU72-204ENST00000378726 CYP2C18P33260 490 aa20.11■□□□□ 0.81
SSU72-204ENST00000378726 RPL22P35268 128 aaKnown RBP20.11■□□□□ 0.81
SSU72-204ENST00000378726 LONRF1Q17RB8 773 aa20.11■□□□□ 0.81
SSU72-204ENST00000378726 BSPRYQ5W0U4 402 aa20.11■□□□□ 0.81
SSU72-204ENST00000378726 DCP1BQ8IZD4 617 aaKnown RBP20.11■□□□□ 0.81
SSU72-204ENST00000378726 CRIPAKQ8N1N5 446 aa20.11■□□□□ 0.81
SSU72-204ENST00000378726 COLEC11Q9BWP8 271 aa20.11■□□□□ 0.81
SSU72-204ENST00000378726 ZCWPW1Q9H0M4 648 aa20.11■□□□□ 0.81
SSU72-204ENST00000378726 USP3Q9Y6I4 520 aa20.11■□□□□ 0.81
SSU72-204ENST00000378726 SYN3O14994 580 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 MAP3K6O95382 1288 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 CXCL10P02778 98 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 ZFXP17010 805 aaPredicted RBP20.1■□□□□ 0.81
SSU72-204ENST00000378726 GOT1P17174 413 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 ARL4AP40617 200 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 MORF4L2Q15014 288 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 LRRC14Q15048 493 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 FAM133BQ5BKY9 247 aaKnown RBP20.1■□□□□ 0.81
SSU72-204ENST00000378726 VARS2Q5ST30 1063 aaKnown RBP20.1■□□□□ 0.81
SSU72-204ENST00000378726 FAM171A1Q5VUB5 890 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 DEFB128Q7Z7B8 93 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 ZCCHC9Q8N567 271 aaKnown RBP20.1■□□□□ 0.81
SSU72-204ENST00000378726 TSC2P49815 1807 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 HOXA2O43364 376 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 CREB1P16220 341 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 AMPD1P23109 780 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 TRIM60Q495X7 471 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 RNASEH2BQ5TBB1 312 aaKnown RBP20.1■□□□□ 0.81
SSU72-204ENST00000378726 MFSD5Q6N075 450 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 TRPM8Q7Z2W7 1104 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms