RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 RFC1P35251 1148 aaPredicted RBP19.51■□□□□ 0.71
SSU72-203ENST00000378725 STARD6P59095 220 aa19.51■□□□□ 0.71
SSU72-203ENST00000378725 PRKCQQ04759 706 aa19.51■□□□□ 0.71
SSU72-203ENST00000378725 GFPT1Q06210 699 aaPredicted RBP19.51■□□□□ 0.71
SSU72-203ENST00000378725 MAMLD1Q13495 774 aa19.51■□□□□ 0.71
SSU72-203ENST00000378725 MLF2Q15773 248 aaPredicted RBP19.51■□□□□ 0.71
SSU72-203ENST00000378725 CCDC122Q5T0U0 273 aa19.51■□□□□ 0.71
SSU72-203ENST00000378725 OTUD1Q5VV17 481 aaPredicted RBP19.51■□□□□ 0.71
SSU72-203ENST00000378725 NUGGCQ68CJ6 796 aa19.51■□□□□ 0.71
SSU72-203ENST00000378725 RHBDF2Q6PJF5 856 aa19.51■□□□□ 0.71
SSU72-203ENST00000378725 DENND1CQ8IV53 801 aa19.51■□□□□ 0.71
SSU72-203ENST00000378725 FAM217AQ8IXS0 508 aa19.51■□□□□ 0.71
SSU72-203ENST00000378725 CPA6Q8N4T0 437 aa19.51■□□□□ 0.71
SSU72-203ENST00000378725 TRIM11Q96F44 468 aa19.51■□□□□ 0.71
SSU72-203ENST00000378725 ADAM33Q9BZ11 813 aa19.51■□□□□ 0.71
SSU72-203ENST00000378725 C8orf33Q9H7E9 229 aaPredicted RBP19.51■□□□□ 0.71
SSU72-203ENST00000378725 ARHGEF3Q9NR81 526 aa19.51■□□□□ 0.71
SSU72-203ENST00000378725 PARVAQ9NVD7 372 aa19.51■□□□□ 0.71
SSU72-203ENST00000378725 CALCOCO1Q9P1Z2 691 aa19.51■□□□□ 0.71
SSU72-203ENST00000378725 CA14Q9ULX7 337 aa19.51■□□□□ 0.71
SSU72-203ENST00000378725 M0QYT0 321 aa19.5■□□□□ 0.71
SSU72-203ENST00000378725 ENDOD1O94919 500 aa19.5■□□□□ 0.71
SSU72-203ENST00000378725 GJB6O95452 261 aa19.5■□□□□ 0.71
SSU72-203ENST00000378725 PDGFRAP16234 1089 aa19.5■□□□□ 0.71
SSU72-203ENST00000378725 TFE3P19532 575 aaPredicted RBP19.5■□□□□ 0.71
SSU72-203ENST00000378725 NR1H3Q13133 447 aa19.5■□□□□ 0.71
SSU72-203ENST00000378725 DHCR24Q15392 516 aa19.5■□□□□ 0.71
SSU72-203ENST00000378725 CCDC14Q49A88 953 aa19.5■□□□□ 0.71
SSU72-203ENST00000378725 DNAJC24Q6P3W2 148 aa19.5■□□□□ 0.71
SSU72-203ENST00000378725 SIX5Q8N196 739 aa19.5■□□□□ 0.71
SSU72-203ENST00000378725 EMC1Q8N766 993 aa19.5■□□□□ 0.71
SSU72-203ENST00000378725 RXFP2Q8WXD0 754 aa19.5■□□□□ 0.71
SSU72-203ENST00000378725 MSANTD3Q96H12 275 aa19.5■□□□□ 0.71
SSU72-203ENST00000378725 SHDQ96IW2 340 aa19.5■□□□□ 0.71
SSU72-203ENST00000378725 CCDC42Q96M95 316 aa19.5■□□□□ 0.71
SSU72-203ENST00000378725 DEF6Q9H4E7 631 aa19.5■□□□□ 0.71
SSU72-203ENST00000378725 FAM204AQ9H8W3 233 aa19.5■□□□□ 0.71
SSU72-203ENST00000378725 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.5■□□□□ 0.71
SSU72-203ENST00000378725 DDIT4Q9NX09 232 aa19.5■□□□□ 0.71
SSU72-203ENST00000378725 TMEM221A6NGB7 291 aa19.49■□□□□ 0.71
SSU72-203ENST00000378725 KCNU1A8MYU2 1149 aa19.49■□□□□ 0.71
SSU72-203ENST00000378725 M0R296 226 aa19.49■□□□□ 0.71
SSU72-203ENST00000378725 AKR1B10O60218 316 aa19.49■□□□□ 0.71
SSU72-203ENST00000378725 F9P00740 461 aa19.49■□□□□ 0.71
SSU72-203ENST00000378725 CYP17A1P05093 508 aa19.49■□□□□ 0.71
SSU72-203ENST00000378725 SLC2A3P11169 496 aa19.49■□□□□ 0.71
SSU72-203ENST00000378725 CHKAP35790 457 aa19.49■□□□□ 0.71
SSU72-203ENST00000378725 PTPN9P43378 593 aa19.49■□□□□ 0.71
SSU72-203ENST00000378725 SULT1E1P49888 294 aa19.49■□□□□ 0.71
SSU72-203ENST00000378725 ZC3H12AQ5D1E8 599 aaKnown RBP19.49■□□□□ 0.71
SSU72-203ENST00000378725 RALGPS2Q86X27 583 aaPredicted RBP19.49■□□□□ 0.71
SSU72-203ENST00000378725 CPXM2Q8N436 756 aa19.49■□□□□ 0.71
SSU72-203ENST00000378725 TTC8Q8TAM2 541 aa19.49■□□□□ 0.71
SSU72-203ENST00000378725 CENPIQ92674 756 aaPredicted RBP19.49■□□□□ 0.71
SSU72-203ENST00000378725 CHFRQ96EP1 664 aa19.49■□□□□ 0.71
SSU72-203ENST00000378725 CFAP57Q96MR6 1250 aa19.49■□□□□ 0.71
SSU72-203ENST00000378725 TBCBQ99426 244 aa19.49■□□□□ 0.71
SSU72-203ENST00000378725 SPHK2Q9NRA0 654 aa19.49■□□□□ 0.71
SSU72-203ENST00000378725 CNOT8Q9UFF9 292 aaKnown RBP19.49■□□□□ 0.71
SSU72-203ENST00000378725 PIAS3Q9Y6X2 628 aa19.49■□□□□ 0.71
SSU72-203ENST00000378725 A0A0C4DFX4 3053 aa19.49■□□□□ 0.71
SSU72-203ENST00000378725 COL4A2P08572 1712 aa19.48■□□□□ 0.71
SSU72-203ENST00000378725 ANKRD62A6NC57 917 aa19.48■□□□□ 0.71
SSU72-203ENST00000378725 SPECC1L-ADORA2AF8WAN1 911 aa19.48■□□□□ 0.71
SSU72-203ENST00000378725 GFRA2O00451 464 aa19.48■□□□□ 0.71
SSU72-203ENST00000378725 CCR1P32246 355 aa19.48■□□□□ 0.71
SSU72-203ENST00000378725 GJA4P35212 333 aa19.48■□□□□ 0.71
SSU72-203ENST00000378725 CXCR3P49682 368 aa19.48■□□□□ 0.71
SSU72-203ENST00000378725 RPL7AP62424 266 aaKnown RBP19.48■□□□□ 0.71
SSU72-203ENST00000378725 PPP2R5DQ14738 602 aa19.48■□□□□ 0.71
SSU72-203ENST00000378725 GAB4Q2WGN9 574 aa19.48■□□□□ 0.71
SSU72-203ENST00000378725 LY6G5CQ5SRR4 150 aa19.48■□□□□ 0.71
SSU72-203ENST00000378725 ADGRF1Q5T601 910 aa19.48■□□□□ 0.71
SSU72-203ENST00000378725 C1orf228Q6PIY5 440 aa19.48■□□□□ 0.71
SSU72-203ENST00000378725 BMP8AQ7Z5Y6 402 aa19.48■□□□□ 0.71
SSU72-203ENST00000378725 TMEM25Q86YD3 366 aa19.48■□□□□ 0.71
SSU72-203ENST00000378725 SPC24Q8NBT2 197 aa19.48■□□□□ 0.71
SSU72-203ENST00000378725 ZNF653Q96CK0 615 aa19.48■□□□□ 0.71
SSU72-203ENST00000378725 THAP2Q9H0W7 228 aa19.48■□□□□ 0.71
SSU72-203ENST00000378725 PIGVQ9NUD9 493 aa19.48■□□□□ 0.71
SSU72-203ENST00000378725 TTC28Q96AY4 2481 aa19.47■□□□□ 0.71
SSU72-203ENST00000378725 TMEM191CA6NGB0 347 aa19.47■□□□□ 0.71
SSU72-203ENST00000378725 MAN2B1O00754 1011 aa19.47■□□□□ 0.71
SSU72-203ENST00000378725 ACSL4O60488 711 aa19.47■□□□□ 0.71
SSU72-203ENST00000378725 ADH1CP00326 375 aa19.47■□□□□ 0.71
SSU72-203ENST00000378725 CYP1A2P05177 515 aa19.47■□□□□ 0.71
SSU72-203ENST00000378725 GPD1P21695 349 aa19.47■□□□□ 0.71
SSU72-203ENST00000378725 SDC4P31431 198 aa19.47■□□□□ 0.71
SSU72-203ENST00000378725 CTHP32929 405 aa19.47■□□□□ 0.71
SSU72-203ENST00000378725 SOX9P48436 509 aa19.47■□□□□ 0.71
SSU72-203ENST00000378725 SLC11A2P49281 568 aa19.47■□□□□ 0.71
SSU72-203ENST00000378725 ZNF143P52747 638 aaPredicted RBP19.47■□□□□ 0.71
SSU72-203ENST00000378725 GALCP54803 685 aa19.47■□□□□ 0.71
SSU72-203ENST00000378725 AMPD2Q01433 879 aa19.47■□□□□ 0.71
SSU72-203ENST00000378725 DEUP1Q05D60 604 aa19.47■□□□□ 0.71
SSU72-203ENST00000378725 NME3Q13232 169 aa19.47■□□□□ 0.71
SSU72-203ENST00000378725 MTA1Q13330 715 aa19.47■□□□□ 0.71
SSU72-203ENST00000378725 TPRG1Q6ZUI0 275 aa19.47■□□□□ 0.71
SSU72-203ENST00000378725 CCDC170Q8IYT3 715 aa19.47■□□□□ 0.71
SSU72-203ENST00000378725 BTN2A3PQ96KV6 586 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms