RNA–Protein interactions for RNA: ENST00000378152.8

ARHGEF1-204, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-204ENST00000378152 ISLR2Q6UXK2 745 aa16.53■□□□□ 0.24
ARHGEF1-204ENST00000378152 KYAT3Q6YP21 454 aaKnown RBP16.53■□□□□ 0.24
ARHGEF1-204ENST00000378152 PQLC3Q8N755 202 aa16.53■□□□□ 0.24
ARHGEF1-204ENST00000378152 REPS2Q8NFH8 660 aa16.53■□□□□ 0.24
ARHGEF1-204ENST00000378152 GSDMBQ8TAX9 411 aa16.53■□□□□ 0.24
ARHGEF1-204ENST00000378152 NIFKQ9BYG3 293 aaKnown RBP16.53■□□□□ 0.24
ARHGEF1-204ENST00000378152 COL11A1P12107 1806 aaPredicted RBP16.52■□□□□ 0.24
ARHGEF1-204ENST00000378152 SIP14410 1827 aa16.52■□□□□ 0.24
ARHGEF1-204ENST00000378152 TXNDC9O14530 226 aa16.52■□□□□ 0.24
ARHGEF1-204ENST00000378152 PEX10O60683 326 aa16.52■□□□□ 0.24
ARHGEF1-204ENST00000378152 AOC1P19801 751 aa16.52■□□□□ 0.24
ARHGEF1-204ENST00000378152 PEX2P28328 305 aa16.52■□□□□ 0.24
ARHGEF1-204ENST00000378152 SLC1A6P48664 564 aa16.52■□□□□ 0.24
ARHGEF1-204ENST00000378152 RGS7P49802 495 aa16.52■□□□□ 0.24
ARHGEF1-204ENST00000378152 AQP4P55087 323 aa16.52■□□□□ 0.24
ARHGEF1-204ENST00000378152 GRM1Q13255 1194 aa16.52■□□□□ 0.24
ARHGEF1-204ENST00000378152 TUBB3Q13509 450 aa16.52■□□□□ 0.24
ARHGEF1-204ENST00000378152 TBCCQ15814 346 aa16.52■□□□□ 0.24
ARHGEF1-204ENST00000378152 TCHHL1Q5QJ38 904 aaPredicted RBP16.52■□□□□ 0.24
ARHGEF1-204ENST00000378152 PDSS2Q86YH6 399 aa16.52■□□□□ 0.24
ARHGEF1-204ENST00000378152 ZNF280CQ8ND82 737 aa16.52■□□□□ 0.24
ARHGEF1-204ENST00000378152 PIWIL2Q8TC59 973 aaKnown RBP16.52■□□□□ 0.24
ARHGEF1-204ENST00000378152 WRNIP1Q96S55 665 aa16.52■□□□□ 0.24
ARHGEF1-204ENST00000378152 CNPY3Q9BT09 278 aa16.52■□□□□ 0.24
ARHGEF1-204ENST00000378152 C1orf21Q9H246 121 aa16.52■□□□□ 0.24
ARHGEF1-204ENST00000378152 PNPOQ9NVS9 261 aa16.52■□□□□ 0.24
ARHGEF1-204ENST00000378152 APOBEC2Q9Y235 224 aaKnown RBP16.52■□□□□ 0.24
ARHGEF1-204ENST00000378152 C19orf81C9J6K1 198 aa16.52■□□□□ 0.23
ARHGEF1-204ENST00000378152 SERPINB6P35237 376 aa16.52■□□□□ 0.23
ARHGEF1-204ENST00000378152 GPD2P43304 727 aa16.52■□□□□ 0.23
ARHGEF1-204ENST00000378152 LAMTOR4Q0VGL1 99 aa16.52■□□□□ 0.23
ARHGEF1-204ENST00000378152 LAMB3Q13751 1172 aa16.52■□□□□ 0.23
ARHGEF1-204ENST00000378152 CCNIQ14094 377 aa16.52■□□□□ 0.23
ARHGEF1-204ENST00000378152 N4BP2L1Q5TBK1 243 aaPredicted RBP16.52■□□□□ 0.23
ARHGEF1-204ENST00000378152 EEF1DP3Q658K8 133 aa16.52■□□□□ 0.23
ARHGEF1-204ENST00000378152 CASC4Q6P4E1 433 aa16.52■□□□□ 0.23
ARHGEF1-204ENST00000378152 ATG14Q6ZNE5 492 aa16.52■□□□□ 0.23
ARHGEF1-204ENST00000378152 FAM183BPQ6ZVS7 135 aa16.52■□□□□ 0.23
ARHGEF1-204ENST00000378152 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.52■□□□□ 0.239e-7■■■■□ 21.4
ARHGEF1-204ENST00000378152 PCDH19Q8TAB3 1148 aa16.52■□□□□ 0.23
ARHGEF1-204ENST00000378152 SIGLEC10Q96LC7 697 aa16.52■□□□□ 0.23
ARHGEF1-204ENST00000378152 CENPKQ9BS16 269 aa16.52■□□□□ 0.23
ARHGEF1-204ENST00000378152 MAF1Q9H063 256 aa16.52■□□□□ 0.23
ARHGEF1-204ENST00000378152 PICK1Q9NRD5 415 aa16.52■□□□□ 0.23
ARHGEF1-204ENST00000378152 NRBP2Q9NSY0 501 aa16.52■□□□□ 0.23
ARHGEF1-204ENST00000378152 DNAJB4Q9UDY4 337 aa16.52■□□□□ 0.23
ARHGEF1-204ENST00000378152 SIX4Q9UIU6 781 aa16.52■□□□□ 0.23
ARHGEF1-204ENST00000378152 STK10O94804 968 aaKnown RBP16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 NFICP08651 508 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 NCF2P19878 526 aaPredicted RBP16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 PRKG1Q13976 671 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 TEDDM1Q5T9Z0 273 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 ZNF534Q76KX8 674 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 ST13P4Q8IZP2 240 aaPredicted RBP16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 GDPD5Q8WTR4 605 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 TMEM176AQ96HP8 235 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 EBNA1BP2Q99848 306 aaKnown RBP16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 RNF181Q9P0P0 153 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 ADAMTS5Q9UNA0 930 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 SCN4AP35499 1836 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 FAM159BA6NKW6 160 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 C2CD4BA6NLJ0 364 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 BIRC5O15392 142 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 SIN3BO75182 1162 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 ITGB3P05106 788 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 STAT5BP51692 787 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 COPAP53621 1224 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 MSLNQ13421 630 aaPredicted RBP16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 MED21Q13503 144 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 TARBP2Q15633 366 aaKnown RBP16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 STXBP2Q15833 593 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 EEPD1Q7L9B9 569 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 AZIN2Q96A70 460 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 MAGEB5Q9BZ81 275 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 ACAD9Q9H845 621 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 MKS1Q9NXB0 559 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 PACSIN3Q9UKS6 424 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 AFG3L2Q9Y4W6 797 aa16.51■□□□□ 0.23
ARHGEF1-204ENST00000378152 GSRP00390 522 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 FGF3P11487 239 aaPredicted RBP16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 EFNA5P52803 228 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 DLG1Q12959 904 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 ACAP1Q15027 740 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 RABGAP1LQ5R372 815 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 MBLAC2Q68D91 279 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 MARK2Q7KZI7 788 aaKnown RBP16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 MAVSQ7Z434 540 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 MAP7D3Q8IWC1 876 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 NLRP4Q96MN2 994 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 EPAS1Q99814 870 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 DMAP1Q9NPF5 467 aaPredicted RBP16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 EMCNQ9ULC0 261 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 INO80B-WBP1J3KQ70 363 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 DDNO94850 711 aaPredicted RBP16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 GRIA2P42262 883 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 SURF1Q15526 300 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 TRIP10Q15642 601 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 SH3D19Q5HYK7 790 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 ACAD11Q709F0 780 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 ARCQ7LC44 396 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms